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| File Name ↓ | File Size ↓ | Date ↓ |
|---|---|---|
| Parent directory/ | - | - |
| extract-methods.Rd | 321 B | 2012-03-30 22:29:27 |
| taxonomyTable-class.Rd | 332 B | 2012-03-30 22:29:27 |
| phylo-class.Rd | 339 B | 2012-03-30 22:29:27 |
| show-methods.Rd | 452 B | 2012-03-30 22:29:27 |
| sampleData-class.Rd | 516 B | 2012-03-30 22:29:27 |
| colname2hex.Rd | 528 B | 2012-03-30 22:29:27 |
| get.component.classes.Rd | 533 B | 2012-03-30 22:29:27 |
| speciesAreRows-methods.Rd | 571 B | 2012-03-30 22:29:27 |
| rank.names.Rd | 602 B | 2012-03-30 22:29:27 |
| ufnum.Rd | 614 B | 2012-03-30 22:29:27 |
| transpose-methods.Rd | 625 B | 2012-03-30 22:29:27 |
| taxglom.internal.Rd | 633 B | 2012-03-30 22:29:27 |
| getTipDistMatrix.Rd | 657 B | 2012-03-30 22:29:27 |
| UFwi.Rd | 681 B | 2012-03-30 22:29:27 |
| nspecies-methods.Rd | 688 B | 2012-03-30 22:29:27 |
| sample.names-methods.Rd | 697 B | 2012-03-30 22:29:27 |
| otuTable-class.Rd | 731 B | 2012-03-30 22:29:27 |
| sample.variables.Rd | 752 B | 2012-03-30 22:29:27 |
| sampleSums.Rd | 780 B | 2012-03-30 22:29:27 |
| speciesSums.Rd | 785 B | 2012-03-30 22:29:27 |
| nsamples-methods.Rd | 790 B | 2012-03-30 22:29:27 |
| getSamples-methods.Rd | 792 B | 2012-03-30 22:29:27 |
| internal2tips.self.Rd | 805 B | 2012-03-30 22:29:27 |
| getSpecies-methods.Rd | 820 B | 2012-03-30 22:29:27 |
| assign-speciesarerows.Rd | 824 B | 2012-03-30 22:29:27 |
| unifracPair.Rd | 854 B | 2012-03-30 22:29:27 |
| edgelist2clique.Rd | 866 B | 2012-03-30 22:29:27 |
| intersect_species.Rd | 886 B | 2012-03-30 22:29:27 |
| topk.Rd | 902 B | 2012-03-30 22:29:27 |
| getslots.phyloseq.Rd | 906 B | 2012-03-30 22:29:27 |
| reconcile_samples.Rd | 910 B | 2012-03-30 22:29:27 |
| species.names-methods.Rd | 910 B | 2012-03-30 22:29:27 |
| getVariable.Rd | 932 B | 2012-03-30 22:29:27 |
| getTaxa.Rd | 973 B | 2012-03-30 22:29:27 |
| assign-otuTable.Rd | 1014 B | 2012-03-30 22:29:27 |
| assign-tre.Rd | 1023 B | 2012-03-30 22:29:27 |
| wUniFracPair.Rd | 1.0 KiB | 2012-03-30 22:29:27 |
| import_mothur_dist.Rd | 1.0 KiB | 2012-03-30 22:29:27 |
| topp.Rd | 1.0 KiB | 2012-03-30 22:29:27 |
| filterfunSample.Rd | 1.0 KiB | 2012-03-30 22:29:27 |
| import_qiime_otu_tax.Rd | 1.1 KiB | 2012-03-30 22:29:27 |
| show_mothur_list_cutoffs.Rd | 1.1 KiB | 2012-03-30 22:29:27 |
| prune_samples-methods.Rd | 1.1 KiB | 2012-03-30 22:29:27 |
| subset_samples-methods.Rd | 1.1 KiB | 2012-03-30 22:29:27 |
| otu2df.Rd | 1.1 KiB | 2012-03-30 22:29:27 |
| import_mothur_groups.Rd | 1.1 KiB | 2012-03-30 22:29:27 |
| rm_outlierf.Rd | 1.1 KiB | 2012-03-30 22:29:27 |
| reconcile_categories.Rd | 1.1 KiB | 2012-03-30 22:29:27 |
| tipglom.internal.Rd | 1.2 KiB | 2012-03-30 22:29:27 |
| import_env_file.Rd | 1.2 KiB | 2012-03-30 22:29:27 |
| subset_species-methods.Rd | 1.2 KiB | 2012-03-30 22:29:27 |
| plot_phyloseq-methods.Rd | 1.2 KiB | 2012-03-30 22:29:27 |
| import_qiime_sampleData.Rd | 1.2 KiB | 2012-03-30 22:29:27 |
| topf.Rd | 1.3 KiB | 2012-03-30 22:29:27 |
| splat.phyloseq.objects.Rd | 1.3 KiB | 2012-03-30 22:29:27 |
| export_env_file.Rd | 1.3 KiB | 2012-03-30 22:29:27 |
| assign-taxTab.Rd | 1.3 KiB | 2012-03-30 22:29:27 |
| threshrank.Rd | 1.3 KiB | 2012-03-30 22:29:27 |
| threshrankfun.Rd | 1.3 KiB | 2012-03-30 22:29:27 |
| phyloseq-package.Rd | 1.3 KiB | 2012-03-30 22:29:27 |
| reconcile_species-methods.Rd | 1.4 KiB | 2012-03-30 22:29:27 |
| envHash2otuTable.Rd | 1.5 KiB | 2012-03-30 22:29:27 |
| filter_taxa.Rd | 1.6 KiB | 2012-03-30 22:29:27 |
| otuTable-methods.Rd | 1.6 KiB | 2012-03-30 22:29:27 |
| tip-annotate.Rd | 1.6 KiB | 2012-03-30 22:29:27 |
| import_mothur_otutable.Rd | 1.6 KiB | 2012-03-30 22:29:27 |
| phyloseq.Rd | 1.6 KiB | 2012-03-30 22:29:27 |
| estimate_richness.Rd | 1.7 KiB | 2012-03-30 22:29:27 |
| export_mothur_dist.Rd | 1.7 KiB | 2012-03-30 22:29:27 |
| transformcounts.Rd | 1.7 KiB | 2012-03-30 22:29:27 |
| taxTab-methods.Rd | 1.8 KiB | 2012-03-30 22:29:27 |
| access.Rd | 1.8 KiB | 2012-03-30 22:29:27 |
| import_RDP_cluster.Rd | 1.9 KiB | 2012-03-30 22:29:27 |
| tre-methods.Rd | 1.9 KiB | 2012-03-30 22:29:27 |
| merge_samples-methods.Rd | 1.9 KiB | 2012-03-30 22:29:27 |
| cca-rda-phyloseq-methods.Rd | 1.9 KiB | 2012-03-30 22:29:27 |
| prune_species-methods.Rd | 2.0 KiB | 2012-03-30 22:29:27 |
| sampleData-methods.Rd | 2.0 KiB | 2012-03-30 22:29:27 |
| import_mothur_otulist.Rd | 2.0 KiB | 2012-03-30 22:29:27 |
| phyloseq-class.Rd | 2.1 KiB | 2012-03-30 22:29:27 |
| merge_species-methods.Rd | 2.1 KiB | 2012-03-30 22:29:27 |
| import.Rd | 2.2 KiB | 2012-03-30 22:29:27 |
| tipglom-methods.Rd | 2.3 KiB | 2012-03-30 22:29:27 |
| JSD.Rd | 2.3 KiB | 2012-03-30 22:29:27 |
| import_mothur_tree.Rd | 2.4 KiB | 2012-03-30 22:29:27 |
| genefilterSample-methods.Rd | 2.5 KiB | 2012-03-30 22:29:27 |
| mt-methods.Rd | 2.5 KiB | 2012-03-30 22:29:27 |
| assign-sampleData.Rd | 2.5 KiB | 2012-03-30 22:29:27 |
| merge_phyloseq_pair-methods.Rd | 2.7 KiB | 2012-03-30 22:29:27 |
| import_biom.Rd | 2.8 KiB | 2012-03-30 22:29:27 |
| merge_phyloseq.Rd | 2.9 KiB | 2012-03-30 22:29:27 |
| import_pyrotagger_tab.Rd | 3.0 KiB | 2012-03-30 22:29:27 |
| subset_ord_plot.Rd | 3.1 KiB | 2012-03-30 22:29:27 |
| make_sample_network.Rd | 3.2 KiB | 2012-03-30 22:29:27 |
| plot_sample_network.Rd | 3.2 KiB | 2012-03-30 22:29:27 |
| plot_tree_phyloseq.Rd | 3.3 KiB | 2012-03-30 22:29:27 |
| data-esophagus.Rd | 3.3 KiB | 2012-03-30 22:29:27 |
| DPCoA.Rd | 3.4 KiB | 2012-03-30 22:29:27 |
| import_mothur.Rd | 3.5 KiB | 2012-03-30 22:29:27 |
| import_qiime.Rd | 3.5 KiB | 2012-03-30 22:29:27 |
| distance.Rd | 3.6 KiB | 2012-03-30 22:29:27 |
| taxglom-methods.Rd | 3.6 KiB | 2012-03-30 22:29:27 |
| data-enterotype.Rd | 3.8 KiB | 2012-03-30 22:29:27 |
| plot_richness_estimates.Rd | 4.2 KiB | 2012-03-30 22:29:27 |
| plot-taxa-bar.Rd | 4.5 KiB | 2012-03-30 22:29:27 |
| data-soilrep.Rd | 5.4 KiB | 2012-03-30 22:29:27 |
| plot_ordination.Rd | 5.9 KiB | 2012-03-30 22:29:27 |
| data-GlobalPatterns.Rd | 6.0 KiB | 2012-03-30 22:29:27 |
| ordinate.Rd | 8.2 KiB | 2012-03-30 22:29:27 |
| UniFrac-methods.Rd | 8.2 KiB | 2012-03-30 22:29:27 |
| phyloseq.pdf | 323.1 KiB | 2012-09-24 16:50:07 |