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Index of /bioconductor/packages/2.8/bioc/manuals/RCytoscape/man/

File Name  ↓ File Size  ↓ Date  ↓ 
Parent directory/--
RCytoscape.pdf678.4 KiB2011-10-25 07:15:03
redraw.Rd455 B2011-06-12 17:49:50
CytoscapeConnection.Rd1.3 KiB2011-06-12 17:49:50
setEdgeLabelColorDirect.Rd1.1 KiB2011-06-12 17:49:50
setDefaultNodeReverseSelectionColor.Rd755 B2011-06-12 17:49:50
getAllEdgeAttributes.Rd1.2 KiB2011-06-12 17:49:50
setNodeFontSizeDirect.Rd858 B2011-06-12 17:49:50
setEdgeFontSizeDirect.Rd1.1 KiB2011-06-12 17:49:50
createWindow.Rd842 B2011-06-12 17:49:50
setEdgeSourceArrowColorDirect.Rd1.6 KiB2011-06-12 17:49:50
setDefaultBackgroundColor.Rd735 B2011-06-12 17:49:50
getLayoutPropertyNames.Rd870 B2011-06-12 17:49:50
getLayoutNames.Rd944 B2011-06-12 17:49:50
saveNetwork.Rd1.0 KiB2011-06-12 17:49:50
setPosition.Rd1003 B2011-06-12 17:49:50
setEdgeTargetArrowOpacityDirect.Rd1.7 KiB2011-06-12 17:49:50
createWindowFromSelection.Rd1.3 KiB2011-06-12 17:49:50
getFirstNeighbors.Rd831 B2011-06-12 17:49:50
setEdgeLineStyleRule.Rd1.3 KiB2011-06-12 17:49:50
cy2.edge.names.Rd1.0 KiB2011-06-12 17:49:50
getLineStyles.Rd605 B2011-06-12 17:49:50
lockNodeDimensions.Rd905 B2011-06-12 17:49:50
setEdgeLabelWidthDirect.Rd1.6 KiB2011-06-12 17:49:50
setEdgeAttributesDirect.Rd1.8 KiB2011-06-12 17:49:50
getEdgeCount.Rd594 B2011-06-12 17:49:50
fitSelectedContent.Rd719 B2011-06-12 17:49:50
setDefaultNodeColor.Rd1.1 KiB2011-06-12 17:49:50
getWindowCount.Rd687 B2011-06-12 17:49:50
getViewCoordinates.Rd797 B2011-06-12 17:49:50
setEdgeSourceArrowShapeDirect.Rd1.7 KiB2011-06-12 17:49:50
setNodeTooltipRule.Rd884 B2011-06-12 17:49:50
getCenter.Rd751 B2011-06-12 17:49:50
setNodeBorderWidthRule.Rd1.2 KiB2011-06-12 17:49:50
getWindowList.Rd521 B2011-06-12 17:49:50
getVisualStyleNames.Rd675 B2011-06-12 17:49:50
version.Rd452 B2011-06-12 17:49:50
getNodeAttribute.Rd1.5 KiB2011-06-12 17:49:50
CytoscapeWindowClass-class.Rd1.0 KiB2011-06-12 17:49:50
eda.Rd797 B2011-06-12 17:49:50
getAllNodes.Rd693 B2011-06-12 17:49:50
setCenter.Rd1.3 KiB2011-06-12 17:49:50
setNodeShapeDirect.Rd819 B2011-06-12 17:49:50
setNodeLabelOpacityDirect.Rd895 B2011-06-12 17:49:50
setDefaultNodeLabelColor.Rd1.1 KiB2011-06-12 17:49:50
getSelectedNodeCount.Rd658 B2011-06-12 17:49:50
selectEdges.Rd994 B2011-06-12 17:49:50
setNodeColorRule.Rd3.8 KiB2011-06-12 17:49:50
setZoom.Rd916 B2011-06-12 17:49:50
setNodeBorderOpacityDirect.Rd904 B2011-06-12 17:49:50
invertNodeSelection.Rd740 B2011-06-12 17:49:50
layout.Rd736 B2011-06-12 17:49:50
setDefaultNodeSize.Rd1.1 KiB2011-06-12 17:49:50
setNodeWidthDirect.Rd1.0 KiB2011-06-12 17:49:50
setEdgeSourceArrowColorRule.Rd1.4 KiB2011-06-12 17:49:50
setLayoutProperties.Rd1.2 KiB2011-06-12 17:49:50
setEdgeSourceArrowRule.Rd1.3 KiB2011-06-12 17:49:50
setEdgeLineStyleDirect.Rd1.9 KiB2011-06-12 17:49:50
setNotAttributesDirect.Rd1.9 KiB2011-06-12 17:49:50
initNodeAttribute.Rd1.0 KiB2011-06-12 17:49:50
existing.CytoscapeWindow.Rd1.3 KiB2011-06-12 17:49:50
getDefaultEdgeReverseSelectionColor.Rd742 B2011-06-12 17:49:50
setEdgeLabelDirect.Rd1005 B2011-06-12 17:49:50
setNodeColorDirect.Rd970 B2011-06-12 17:49:50
deleteNodeAttribute.Rd1.1 KiB2011-06-12 17:49:50
deleteWindow.Rd1.3 KiB2011-06-12 17:49:50
setNodeLabelRule.Rd973 B2011-06-12 17:49:50
getAllNodeAttributes.Rd1.2 KiB2011-06-12 17:49:50
setDefaultNodeBorderColor.Rd1.2 KiB2011-06-12 17:49:50
dockPanel.Rd929 B2011-06-12 17:49:50
setWindowSize.Rd1.0 KiB2011-06-12 17:49:50
getAllEdges.Rd546 B2011-06-12 17:49:50
setGraph.Rd630 B2011-06-12 17:49:50
addCyEdge.Rd1.0 KiB2011-06-12 17:49:50
displayGraph.Rd958 B2011-06-12 17:49:50
setDefaultEdgeLineWidth.Rd1.0 KiB2011-06-12 17:49:50
ping.Rd369 B2011-06-12 17:49:50
selectNodes.Rd764 B2011-06-12 17:49:50
selectFirstNeighborsOfSelectedNodes.Rd971 B2011-06-12 17:49:50
setDefaultNodeFontSize.Rd1.1 KiB2011-06-12 17:49:50
noa.Rd705 B2011-06-12 17:49:50
clearMsg.Rd416 B2011-06-12 17:49:50
addGraphToGraph.Rd1.7 KiB2011-06-12 17:49:50
makeRandomGraph.Rd1.0 KiB2011-06-12 17:49:50
getNodeAttributeNames.Rd715 B2011-06-12 17:49:50
setDefaultEdgeColor.Rd1.2 KiB2011-06-12 17:49:50
msg.Rd635 B2011-06-12 17:49:50
getNodeCount.Rd590 B2011-06-12 17:49:50
getDefaultNodeSelectionColor.Rd699 B2011-06-12 17:49:50
setNodeAttributes.Rd1.0 KiB2011-06-12 17:49:50
setNodeShapeRule.Rd1.2 KiB2011-06-12 17:49:50
setEdgeTooltipRule.Rd819 B2011-06-12 17:49:50
setNodeSizeDirect.Rd929 B2011-06-12 17:49:50
getDefaultEdgeSelectionColor.Rd700 B2011-06-12 17:49:50
hidePanel.Rd954 B2011-06-12 17:49:50
getNodeShapes.Rd687 B2011-06-12 17:49:50
getEdgeAttributeNames.Rd714 B2011-06-12 17:49:50
getDirectlyModifiableVisualProperties.Rd972 B2011-06-12 17:49:50
setNodeSizeRule.Rd2.8 KiB2011-06-12 17:49:50
setNodeBorderColorRule.Rd3.8 KiB2011-06-12 17:49:50
getAttributeClassNames.Rd873 B2011-06-12 17:49:50
setEdgeSourceArrowOpacityDirect.Rd1.7 KiB2011-06-12 17:49:50
hideNodes.Rd671 B2011-06-12 17:49:50
validCyWin.Rd894 B2011-06-12 17:49:50
new.CytoscapeWindow.Rd1.2 KiB2011-06-12 17:49:50
setVisualStyle.Rd1.1 KiB2011-06-12 17:49:50
setDefaultEdgeReverseSelectionColor.Rd755 B2011-06-12 17:49:50
noa.names.Rd467 B2011-06-12 17:49:50
deleteAllWindows.Rd622 B2011-06-12 17:49:50
setEdgeLineWidthRule.Rd1.2 KiB2011-06-12 17:49:50
unhideNodes.Rd718 B2011-06-12 17:49:50
setNodeFillOpacityDirect.Rd895 B2011-06-12 17:49:50
showGraphicsDetails.Rd618 B2011-06-12 17:49:50
setEdgeTargetArrowRule.Rd1.3 KiB2011-06-12 17:49:50
CytoscapeWindow.Rd1.1 KiB2011-06-12 17:49:50
getArrowShapes.Rd756 B2011-06-12 17:49:50
sendEdges.Rd578 B2011-06-12 17:49:50
setEdgeLabelRule.Rd804 B2011-06-12 17:49:50
setDefaultEdgeSelectionColor.Rd712 B2011-06-12 17:49:50
getDefaultNodeReverseSelectionColor.Rd742 B2011-06-12 17:49:50
floatPanel.Rd1.0 KiB2011-06-12 17:49:50
deleteEdgeAttribute.Rd1.2 KiB2011-06-12 17:49:50
setEdgeTargetArrowColorDirect.Rd1.6 KiB2011-06-12 17:49:50
makeSimpleGraph.Rd2.1 KiB2011-06-12 17:49:50
setNodeOpacityDirect.Rd896 B2011-06-12 17:49:50
setEdgeColorDirect.Rd883 B2011-06-12 17:49:50
setEdgeOpacityDirect.Rd1.1 KiB2011-06-12 17:49:50
setNodeImageDirect.Rd909 B2011-06-12 17:49:50
setNodeLabelDirect.Rd862 B2011-06-12 17:49:50
setDefaultNodeShape.Rd1.1 KiB2011-06-12 17:49:50
setEdgeLineWidthDirect.Rd1.0 KiB2011-06-12 17:49:50
getLayoutNameMapping.Rd1.1 KiB2011-06-12 17:49:50
getGraph.Rd465 B2011-06-12 17:49:50
getGraphFromCyWindow.Rd706 B2011-06-12 17:49:50
setEdgeLabelOpacityDirect.Rd1.2 KiB2011-06-12 17:49:50
getSelectedEdges.Rd694 B2011-06-12 17:49:50
deleteSelectedNodes.Rd830 B2011-06-12 17:49:50
hideSelectedNodes.Rd798 B2011-06-12 17:49:50
setEdgeTargetArrowColorRule.Rd1.4 KiB2011-06-12 17:49:50
getZoom.Rd744 B2011-06-12 17:49:50
copyVisualStyle.Rd2.2 KiB2011-06-12 17:49:50
setDefaultNodeSelectionColor.Rd713 B2011-06-12 17:49:50
getWindowID.Rd898 B2011-06-12 17:49:50
eda.names.Rd762 B2011-06-12 17:49:50
sendNodes.Rd578 B2011-06-12 17:49:50
saveImage.Rd1.1 KiB2011-06-12 17:49:50
getLayoutPropertyValue.Rd1.4 KiB2011-06-12 17:49:50
getEdgeAttribute.Rd1.6 KiB2011-06-12 17:49:50
fitContent.Rd639 B2011-06-12 17:49:50
setDefaultNodeBorderWidth.Rd1.1 KiB2011-06-12 17:49:50
getDefaultBackgroundColor.Rd683 B2011-06-12 17:49:50
setEdgeAttributes.Rd1005 B2011-06-12 17:49:50
setEdgeTooltipDirect.Rd1.3 KiB2011-06-12 17:49:50
hideAllPanels.Rd539 B2011-06-12 17:49:50
unhideAll.Rd632 B2011-06-12 17:49:50
setEdgeTargetArrowShapeDirect.Rd1.7 KiB2011-06-12 17:49:50
invertEdgeSelection.Rd716 B2011-06-12 17:49:50
raiseWindow.Rd599 B2011-06-12 17:49:50
getSelectedEdgeCount.Rd778 B2011-06-12 17:49:50
getLayoutPropertyType.Rd1.3 KiB2011-06-12 17:49:50
deleteSelectedEdges.Rd853 B2011-06-12 17:49:50
getPosition.Rd758 B2011-06-12 17:49:50
getSelectedNodes.Rd679 B2011-06-12 17:49:50
setEdgeColorRule.Rd1.6 KiB2011-06-12 17:49:50
clearSelection.Rd631 B2011-06-12 17:49:50
initEdgeAttribute.Rd1.0 KiB2011-06-12 17:49:50
hideSelectedEdges.Rd812 B2011-06-12 17:49:50
addCyNode.Rd841 B2011-06-12 17:49:50
setNodeHeightDirect.Rd1.1 KiB2011-06-12 17:49:50
CytoscapeConnectionClass-class.Rd1.2 KiB2011-06-12 17:49:50