Back to Multiple platform build/check report for BioC 3.20: simplified long |
|
This page was generated on 2024-07-08 11:45 -0400 (Mon, 08 Jul 2024).
Hostname | OS | Arch (*) | R version | Installed pkgs |
---|---|---|---|---|
nebbiolo2 | Linux (Ubuntu 22.04.3 LTS) | x86_64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4643 |
palomino6 | Windows Server 2022 Datacenter | x64 | 4.4.1 (2024-06-14 ucrt) -- "Race for Your Life" | 4414 |
lconway | macOS 12.7.1 Monterey | x86_64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4442 |
kjohnson3 | macOS 13.6.5 Ventura | arm64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4391 |
kunpeng2 | Linux (openEuler 22.03 LTS-SP1) | aarch64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 3833 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
Package 963/2243 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
HPiP 1.11.0 (landing page) Matineh Rahmatbakhsh
| nebbiolo2 | Linux (Ubuntu 22.04.3 LTS) / x86_64 | OK | OK | OK | |||||||||
palomino6 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | |||||||||
lconway | macOS 12.7.1 Monterey / x86_64 | OK | OK | OK | OK | |||||||||
kjohnson3 | macOS 13.6.5 Ventura / arm64 | OK | OK | OK | OK | |||||||||
kunpeng2 | Linux (openEuler 22.03 LTS-SP1) / aarch64 | NA | OK | OK | ||||||||||
To the developers/maintainers of the HPiP package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/HPiP.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. - See Martin Grigorov's blog post for how to debug Linux ARM64 related issues on a x86_64 host. |
Package: HPiP |
Version: 1.11.0 |
Command: /home/biocbuild/R/R/bin/R CMD check --install=check:HPiP.install-out.txt --library=/home/biocbuild/R/R/site-library --no-vignettes --timings HPiP_1.11.0.tar.gz |
StartedAt: 2024-07-06 05:43:17 -0000 (Sat, 06 Jul 2024) |
EndedAt: 2024-07-06 05:49:11 -0000 (Sat, 06 Jul 2024) |
EllapsedTime: 353.7 seconds |
RetCode: 0 |
Status: OK |
CheckDir: HPiP.Rcheck |
Warnings: 0 |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/R/R/bin/R CMD check --install=check:HPiP.install-out.txt --library=/home/biocbuild/R/R/site-library --no-vignettes --timings HPiP_1.11.0.tar.gz ### ############################################################################## ############################################################################## * using log directory ‘/home/biocbuild/bbs-3.20-bioc/meat/HPiP.Rcheck’ * using R version 4.4.1 (2024-06-14) * using platform: aarch64-unknown-linux-gnu * R was compiled by gcc (GCC) 12.2.1 20220819 (openEuler 12.2.1-14) GNU Fortran (GCC) 10.3.1 * running under: openEuler 22.03 (LTS-SP1) * using session charset: UTF-8 * using option ‘--no-vignettes’ * checking for file ‘HPiP/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘HPiP’ version ‘1.11.0’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘HPiP’ can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... NOTE License stub is invalid DCF. * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... NOTE checkRd: (-1) getHPI.Rd:29: Lost braces 29 | then the Kronecker product is the code{(pm × qn)} block matrix | ^ * checking Rd metadata ... OK * checking Rd cross-references ... NOTE Package unavailable to check Rd xrefs: ‘ftrCOOL’ * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking R/sysdata.rda ... OK * checking files in ‘vignettes’ ... OK * checking examples ... OK Examples with CPU (user + system) or elapsed time > 5s user system elapsed var_imp 40.521 0.795 41.396 FSmethod 38.083 0.615 38.773 corr_plot 38.181 0.356 38.599 pred_ensembel 19.589 0.339 17.583 enrichfindP 0.537 0.044 23.625 getFASTA 0.089 0.008 6.121 * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... Running ‘runTests.R’ OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking running R code from vignettes ... SKIPPED * checking re-building of vignette outputs ... SKIPPED * checking PDF version of manual ... OK * DONE Status: 3 NOTEs See ‘/home/biocbuild/bbs-3.20-bioc/meat/HPiP.Rcheck/00check.log’ for details.
HPiP.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/R/R/bin/R CMD INSTALL HPiP ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/R/R-4.4.1/site-library’ * installing *source* package ‘HPiP’ ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (HPiP)
HPiP.Rcheck/tests/runTests.Rout
R version 4.4.1 (2024-06-14) -- "Race for Your Life" Copyright (C) 2024 The R Foundation for Statistical Computing Platform: aarch64-unknown-linux-gnu R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > BiocGenerics:::testPackage('HPiP') No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE avNNet Loading required package: ggplot2 Loading required package: lattice Fitting Repeat 1 # weights: 103 initial value 101.362421 final value 94.484211 converged Fitting Repeat 2 # weights: 103 initial value 100.098850 final value 94.484211 converged Fitting Repeat 3 # weights: 103 initial value 97.902071 final value 94.484211 converged Fitting Repeat 4 # weights: 103 initial value 99.071227 final value 94.484211 converged Fitting Repeat 5 # weights: 103 initial value 95.103562 final value 94.484211 converged Fitting Repeat 1 # weights: 305 initial value 105.600753 final value 94.484211 converged Fitting Repeat 2 # weights: 305 initial value 102.010034 final value 94.484211 converged Fitting Repeat 3 # weights: 305 initial value 114.929232 final value 93.775294 converged Fitting Repeat 4 # weights: 305 initial value 100.745515 final value 94.133333 converged Fitting Repeat 5 # weights: 305 initial value 102.734728 final value 94.484211 converged Fitting Repeat 1 # weights: 507 initial value 103.571372 final value 94.484211 converged Fitting Repeat 2 # weights: 507 initial value 105.382164 iter 10 value 94.486861 final value 94.484211 converged Fitting Repeat 3 # weights: 507 initial value 97.523986 final value 94.484211 converged Fitting Repeat 4 # weights: 507 initial value 135.249261 iter 10 value 94.453343 final value 94.453333 converged Fitting Repeat 5 # weights: 507 initial value 112.775560 final value 94.466823 converged Fitting Repeat 1 # weights: 103 initial value 96.988319 iter 10 value 94.494552 iter 20 value 93.989748 iter 30 value 87.485050 iter 40 value 86.193001 iter 50 value 85.822813 iter 60 value 85.240119 iter 70 value 84.755485 iter 80 value 84.562865 final value 84.561634 converged Fitting Repeat 2 # weights: 103 initial value 97.289731 iter 10 value 94.368587 iter 20 value 90.639914 iter 30 value 85.855373 iter 40 value 85.245700 iter 50 value 84.819049 iter 60 value 84.530387 iter 70 value 84.397000 iter 80 value 84.019245 iter 90 value 83.678037 iter 100 value 83.667024 final value 83.667024 stopped after 100 iterations Fitting Repeat 3 # weights: 103 initial value 104.068358 iter 10 value 94.488795 iter 20 value 94.306773 iter 30 value 89.580074 iter 40 value 87.130931 iter 50 value 84.283544 iter 60 value 83.527115 iter 70 value 83.354632 iter 80 value 83.150185 iter 90 value 83.020148 iter 100 value 82.945759 final value 82.945759 stopped after 100 iterations Fitting Repeat 4 # weights: 103 initial value 100.106601 iter 10 value 94.496208 iter 20 value 94.470877 iter 30 value 85.056396 iter 40 value 84.051585 iter 50 value 83.770924 iter 60 value 83.699362 iter 70 value 83.563626 iter 80 value 83.023878 iter 90 value 82.937444 iter 100 value 82.862571 final value 82.862571 stopped after 100 iterations Fitting Repeat 5 # weights: 103 initial value 98.010236 iter 10 value 94.400636 iter 20 value 88.205963 iter 30 value 86.701545 iter 40 value 82.907483 iter 50 value 82.579026 iter 60 value 81.852337 iter 70 value 81.533749 iter 80 value 81.400891 iter 90 value 81.250965 iter 100 value 81.112756 final value 81.112756 stopped after 100 iterations Fitting Repeat 1 # weights: 305 initial value 103.788152 iter 10 value 94.524412 iter 20 value 88.172451 iter 30 value 86.514443 iter 40 value 85.431283 iter 50 value 84.893940 iter 60 value 84.690417 iter 70 value 84.329558 iter 80 value 83.501352 iter 90 value 80.628089 iter 100 value 80.049669 final value 80.049669 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 104.938122 iter 10 value 95.000903 iter 20 value 94.491868 iter 30 value 94.331913 iter 40 value 86.027857 iter 50 value 84.603801 iter 60 value 84.209199 iter 70 value 84.030465 iter 80 value 83.972196 iter 90 value 83.609647 iter 100 value 83.553266 final value 83.553266 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 107.459417 iter 10 value 94.672462 iter 20 value 94.506968 iter 30 value 94.491632 iter 40 value 92.763102 iter 50 value 89.983209 iter 60 value 86.306351 iter 70 value 84.478389 iter 80 value 82.208693 iter 90 value 81.784284 iter 100 value 81.340349 final value 81.340349 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 102.547272 iter 10 value 94.511233 iter 20 value 94.367730 iter 30 value 87.686407 iter 40 value 84.416496 iter 50 value 84.026431 iter 60 value 83.257179 iter 70 value 82.861033 iter 80 value 81.507343 iter 90 value 80.826659 iter 100 value 80.446742 final value 80.446742 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 102.181774 iter 10 value 90.772828 iter 20 value 89.112277 iter 30 value 83.839380 iter 40 value 82.654173 iter 50 value 82.149550 iter 60 value 81.508474 iter 70 value 80.927120 iter 80 value 80.789612 iter 90 value 80.594184 iter 100 value 80.125266 final value 80.125266 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 109.072672 iter 10 value 94.906654 iter 20 value 94.303567 iter 30 value 91.695318 iter 40 value 90.174403 iter 50 value 88.599950 iter 60 value 85.345976 iter 70 value 81.818696 iter 80 value 80.878030 iter 90 value 80.671949 iter 100 value 80.521052 final value 80.521052 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 108.134906 iter 10 value 94.234311 iter 20 value 87.645836 iter 30 value 86.642286 iter 40 value 82.818517 iter 50 value 81.682221 iter 60 value 80.691718 iter 70 value 80.189516 iter 80 value 79.967006 iter 90 value 79.801072 iter 100 value 79.782131 final value 79.782131 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 104.259577 iter 10 value 94.069169 iter 20 value 88.089966 iter 30 value 84.789211 iter 40 value 82.443477 iter 50 value 82.307800 iter 60 value 82.212924 iter 70 value 81.293011 iter 80 value 80.296841 iter 90 value 79.812279 iter 100 value 79.715253 final value 79.715253 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 118.018852 iter 10 value 94.504193 iter 20 value 92.524565 iter 30 value 84.859296 iter 40 value 82.638525 iter 50 value 82.363102 iter 60 value 82.317616 iter 70 value 82.302919 iter 80 value 82.280592 iter 90 value 82.156760 iter 100 value 81.731176 final value 81.731176 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 116.912862 iter 10 value 98.467563 iter 20 value 84.549142 iter 30 value 82.848869 iter 40 value 81.698241 iter 50 value 81.123320 iter 60 value 80.986458 iter 70 value 80.867692 iter 80 value 80.548424 iter 90 value 80.460324 iter 100 value 80.348025 final value 80.348025 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 96.643303 final value 94.485902 converged Fitting Repeat 2 # weights: 103 initial value 96.607686 final value 94.485786 converged Fitting Repeat 3 # weights: 103 initial value 96.866600 iter 10 value 94.485961 iter 20 value 94.447825 iter 30 value 84.517192 iter 40 value 84.076067 iter 50 value 84.030657 iter 60 value 84.030524 iter 60 value 84.030523 iter 60 value 84.030523 final value 84.030523 converged Fitting Repeat 4 # weights: 103 initial value 100.499315 final value 94.485836 converged Fitting Repeat 5 # weights: 103 initial value 99.565791 final value 94.485730 converged Fitting Repeat 1 # weights: 305 initial value 96.311803 iter 10 value 94.488506 iter 20 value 94.464048 iter 30 value 91.966679 final value 91.943365 converged Fitting Repeat 2 # weights: 305 initial value 96.890016 iter 10 value 94.471703 iter 20 value 84.188032 iter 30 value 84.162408 iter 40 value 83.938984 iter 50 value 83.612509 iter 60 value 83.555781 final value 83.555150 converged Fitting Repeat 3 # weights: 305 initial value 109.864617 iter 10 value 94.490355 iter 20 value 94.460982 iter 30 value 94.220791 iter 40 value 92.421070 iter 50 value 82.963816 iter 60 value 82.571943 iter 70 value 82.433862 final value 82.433444 converged Fitting Repeat 4 # weights: 305 initial value 95.232299 iter 10 value 89.971227 iter 20 value 86.448812 iter 30 value 85.619116 iter 40 value 84.418948 iter 50 value 84.208719 iter 60 value 84.207349 iter 70 value 84.195277 final value 84.194034 converged Fitting Repeat 5 # weights: 305 initial value 93.530347 iter 10 value 89.419255 iter 20 value 88.758352 iter 30 value 88.757073 iter 40 value 87.879776 iter 50 value 86.345816 iter 60 value 86.339704 iter 70 value 86.315633 iter 80 value 84.258012 iter 90 value 83.625835 final value 83.625351 converged Fitting Repeat 1 # weights: 507 initial value 112.297068 iter 10 value 94.429050 iter 20 value 94.427068 iter 30 value 94.277171 iter 40 value 94.266436 iter 50 value 93.983138 iter 60 value 93.508676 iter 70 value 86.620964 iter 80 value 81.432406 iter 90 value 80.288947 iter 100 value 80.083811 final value 80.083811 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 108.455643 iter 10 value 94.491443 iter 20 value 94.475642 iter 30 value 84.717065 iter 40 value 84.043380 iter 50 value 83.997444 iter 60 value 83.991167 final value 83.991140 converged Fitting Repeat 3 # weights: 507 initial value 103.586872 iter 10 value 94.492561 iter 20 value 94.452341 iter 30 value 87.476919 iter 40 value 84.547993 iter 50 value 82.934162 iter 60 value 82.842074 iter 70 value 82.841287 iter 80 value 82.840929 iter 90 value 82.840648 final value 82.840378 converged Fitting Repeat 4 # weights: 507 initial value 100.126125 iter 10 value 94.474697 iter 20 value 94.466158 iter 30 value 86.769224 iter 40 value 85.674403 iter 50 value 85.345288 iter 60 value 82.012089 iter 70 value 81.908066 final value 81.880025 converged Fitting Repeat 5 # weights: 507 initial value 107.659747 iter 10 value 94.491866 iter 20 value 94.470061 iter 30 value 90.808417 iter 40 value 85.864412 iter 50 value 84.819924 iter 60 value 83.783182 iter 70 value 82.889078 iter 80 value 82.499368 iter 90 value 82.491094 final value 82.488599 converged Fitting Repeat 1 # weights: 103 initial value 97.339017 final value 93.915746 converged Fitting Repeat 2 # weights: 103 initial value 99.212461 final value 94.052910 converged Fitting Repeat 3 # weights: 103 initial value 99.186556 final value 94.052910 converged Fitting Repeat 4 # weights: 103 initial value 97.273519 final value 94.052910 converged Fitting Repeat 5 # weights: 103 initial value 99.383440 final value 94.052910 converged Fitting Repeat 1 # weights: 305 initial value 119.823627 iter 10 value 93.915748 final value 93.915746 converged Fitting Repeat 2 # weights: 305 initial value 113.728962 final value 93.868965 converged Fitting Repeat 3 # weights: 305 initial value 116.297407 iter 10 value 93.685238 iter 10 value 93.685238 iter 10 value 93.685238 final value 93.685238 converged Fitting Repeat 4 # weights: 305 initial value 104.929783 final value 94.052910 converged Fitting Repeat 5 # weights: 305 initial value 105.794472 final value 94.003143 converged Fitting Repeat 1 # weights: 507 initial value 121.784687 final value 93.915746 converged Fitting Repeat 2 # weights: 507 initial value 103.516561 final value 94.052910 converged Fitting Repeat 3 # weights: 507 initial value 104.947322 final value 94.052911 converged Fitting Repeat 4 # weights: 507 initial value 118.828934 iter 10 value 87.572034 iter 20 value 86.077988 final value 86.077985 converged Fitting Repeat 5 # weights: 507 initial value 95.491774 iter 10 value 93.628480 final value 93.628453 converged Fitting Repeat 1 # weights: 103 initial value 102.736739 iter 10 value 89.068679 iter 20 value 85.146488 iter 30 value 83.669772 iter 40 value 82.813983 iter 50 value 82.180259 iter 60 value 82.142054 iter 70 value 82.135033 final value 82.134912 converged Fitting Repeat 2 # weights: 103 initial value 104.343559 iter 10 value 94.645632 iter 20 value 94.079338 iter 30 value 93.960280 iter 40 value 89.235970 iter 50 value 87.068137 iter 60 value 86.346744 iter 70 value 85.226094 iter 80 value 85.196338 iter 90 value 84.430825 iter 100 value 83.668475 final value 83.668475 stopped after 100 iterations Fitting Repeat 3 # weights: 103 initial value 102.873162 iter 10 value 94.071976 iter 20 value 89.778717 iter 30 value 88.798329 iter 40 value 86.385348 iter 50 value 82.618951 iter 60 value 82.291777 iter 70 value 82.288461 iter 80 value 82.117309 iter 90 value 82.011217 iter 100 value 81.969671 final value 81.969671 stopped after 100 iterations Fitting Repeat 4 # weights: 103 initial value 104.652440 iter 10 value 94.186099 iter 20 value 93.575497 iter 30 value 87.058432 iter 40 value 83.837556 iter 50 value 82.776408 iter 60 value 82.219206 iter 70 value 82.162022 iter 80 value 82.148434 iter 90 value 82.134914 final value 82.134912 converged Fitting Repeat 5 # weights: 103 initial value 105.441855 iter 10 value 94.055151 iter 20 value 94.054874 iter 30 value 93.965904 iter 40 value 90.830722 iter 50 value 90.450808 iter 60 value 85.488243 iter 70 value 83.806527 iter 80 value 83.543546 iter 90 value 83.020388 iter 100 value 82.033253 final value 82.033253 stopped after 100 iterations Fitting Repeat 1 # weights: 305 initial value 98.895052 iter 10 value 93.344491 iter 20 value 85.252372 iter 30 value 83.065945 iter 40 value 82.585564 iter 50 value 82.257130 iter 60 value 81.677898 iter 70 value 80.955820 iter 80 value 80.873254 iter 90 value 80.860668 iter 100 value 80.812212 final value 80.812212 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 109.205912 iter 10 value 94.023540 iter 20 value 89.598849 iter 30 value 88.584247 iter 40 value 86.738766 iter 50 value 86.247791 iter 60 value 85.695230 iter 70 value 82.337716 iter 80 value 81.986818 iter 90 value 81.681085 iter 100 value 81.660381 final value 81.660381 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 99.587444 iter 10 value 94.064701 iter 20 value 92.917054 iter 30 value 88.215866 iter 40 value 86.721313 iter 50 value 86.029151 iter 60 value 85.407534 iter 70 value 84.914468 iter 80 value 84.727250 iter 90 value 82.883828 iter 100 value 80.400590 final value 80.400590 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 118.172590 iter 10 value 94.142197 iter 20 value 88.671436 iter 30 value 86.200482 iter 40 value 86.018357 iter 50 value 83.261334 iter 60 value 82.750623 iter 70 value 82.440566 iter 80 value 80.833472 iter 90 value 80.716373 iter 100 value 80.658093 final value 80.658093 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 111.563281 iter 10 value 93.871687 iter 20 value 83.780561 iter 30 value 83.414322 iter 40 value 82.757033 iter 50 value 82.426238 iter 60 value 82.315522 iter 70 value 81.632934 iter 80 value 81.403186 iter 90 value 81.198877 iter 100 value 80.989646 final value 80.989646 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 106.961008 iter 10 value 88.120062 iter 20 value 86.197230 iter 30 value 85.782656 iter 40 value 84.827924 iter 50 value 83.174836 iter 60 value 81.417415 iter 70 value 80.317595 iter 80 value 79.765487 iter 90 value 79.285779 iter 100 value 79.255764 final value 79.255764 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 110.091926 iter 10 value 94.414720 iter 20 value 94.077796 iter 30 value 93.552232 iter 40 value 85.047802 iter 50 value 83.030536 iter 60 value 82.431034 iter 70 value 80.643064 iter 80 value 79.988705 iter 90 value 79.718313 iter 100 value 79.525814 final value 79.525814 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 105.526503 iter 10 value 92.867791 iter 20 value 86.451070 iter 30 value 83.813151 iter 40 value 81.738069 iter 50 value 80.524636 iter 60 value 79.988226 iter 70 value 79.760406 iter 80 value 79.509907 iter 90 value 79.463943 iter 100 value 79.322151 final value 79.322151 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 136.522180 iter 10 value 94.108202 iter 20 value 92.705685 iter 30 value 91.915002 iter 40 value 84.319589 iter 50 value 83.556159 iter 60 value 83.274380 iter 70 value 82.341415 iter 80 value 81.099830 iter 90 value 80.619537 iter 100 value 80.120437 final value 80.120437 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 110.269669 iter 10 value 94.597184 iter 20 value 93.283312 iter 30 value 91.432399 iter 40 value 83.306680 iter 50 value 81.987097 iter 60 value 81.834761 iter 70 value 80.976604 iter 80 value 80.851518 iter 90 value 80.668049 iter 100 value 80.157072 final value 80.157072 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 98.502338 final value 93.917554 converged Fitting Repeat 2 # weights: 103 initial value 96.027452 iter 10 value 93.698957 iter 20 value 93.698663 iter 30 value 93.695825 final value 93.695805 converged Fitting Repeat 3 # weights: 103 initial value 102.679791 iter 10 value 94.054490 iter 20 value 94.052094 iter 20 value 94.052094 iter 30 value 93.916056 iter 40 value 84.197065 iter 50 value 82.147222 iter 60 value 82.126487 iter 70 value 82.118621 iter 80 value 82.056493 iter 90 value 82.053498 iter 100 value 82.043032 final value 82.043032 stopped after 100 iterations Fitting Repeat 4 # weights: 103 initial value 99.879515 final value 94.054543 converged Fitting Repeat 5 # weights: 103 initial value 102.576303 final value 94.054305 converged Fitting Repeat 1 # weights: 305 initial value 102.561519 iter 10 value 93.993994 iter 20 value 93.920672 iter 30 value 93.920325 iter 40 value 93.913861 iter 50 value 93.697010 iter 60 value 93.695964 final value 93.695906 converged Fitting Repeat 2 # weights: 305 initial value 111.435682 iter 10 value 94.058124 iter 20 value 84.239396 iter 30 value 83.648307 iter 40 value 83.647715 iter 50 value 83.647569 iter 60 value 82.347934 iter 70 value 82.266450 iter 80 value 82.202290 iter 90 value 81.839538 iter 100 value 80.072532 final value 80.072532 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 94.597843 iter 10 value 93.999853 iter 20 value 93.992889 iter 30 value 93.827839 iter 40 value 88.311751 iter 50 value 81.137757 iter 60 value 78.404739 iter 70 value 78.059319 iter 80 value 77.970638 iter 90 value 77.969705 final value 77.969233 converged Fitting Repeat 4 # weights: 305 initial value 110.008586 iter 10 value 94.057636 iter 20 value 93.896228 iter 30 value 83.674667 iter 40 value 83.671925 iter 50 value 82.947769 final value 82.643880 converged Fitting Repeat 5 # weights: 305 initial value 102.792947 iter 10 value 94.057606 iter 20 value 87.458049 final value 87.056695 converged Fitting Repeat 1 # weights: 507 initial value 98.676755 iter 10 value 91.771701 iter 20 value 91.169253 final value 91.169021 converged Fitting Repeat 2 # weights: 507 initial value 95.932208 iter 10 value 84.115650 iter 20 value 81.620539 iter 30 value 80.951646 iter 40 value 80.786681 iter 50 value 80.760358 iter 60 value 80.759548 iter 70 value 80.755539 iter 80 value 80.513953 iter 90 value 80.405662 iter 100 value 80.405356 final value 80.405356 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 104.234437 iter 10 value 93.925211 iter 20 value 93.899335 iter 30 value 85.607405 iter 40 value 81.918569 iter 50 value 81.834714 iter 60 value 81.682431 iter 70 value 80.409002 iter 80 value 80.354560 iter 90 value 80.324724 iter 100 value 80.324598 final value 80.324598 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 95.445404 iter 10 value 94.060892 iter 20 value 94.052984 iter 30 value 93.692696 iter 40 value 87.259126 iter 50 value 81.392045 iter 60 value 78.734371 iter 70 value 78.233129 iter 80 value 78.226375 iter 90 value 78.225698 iter 100 value 78.225007 final value 78.225007 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 105.470095 iter 10 value 94.060921 iter 20 value 94.053788 iter 30 value 85.253426 iter 40 value 83.675463 iter 50 value 83.671528 iter 60 value 83.012641 iter 70 value 82.555702 iter 80 value 81.545923 iter 90 value 80.145559 iter 100 value 80.052015 final value 80.052015 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 99.404965 final value 94.052910 converged Fitting Repeat 2 # weights: 103 initial value 100.846260 iter 10 value 93.836067 final value 93.836066 converged Fitting Repeat 3 # weights: 103 initial value 103.200457 final value 94.052910 converged Fitting Repeat 4 # weights: 103 initial value 102.156193 final value 94.052910 converged Fitting Repeat 5 # weights: 103 initial value 94.431554 final value 94.052910 converged Fitting Repeat 1 # weights: 305 initial value 118.816000 final value 94.052910 converged Fitting Repeat 2 # weights: 305 initial value 103.596554 final value 92.954172 converged Fitting Repeat 3 # weights: 305 initial value 95.394902 final value 94.052911 converged Fitting Repeat 4 # weights: 305 initial value 101.797405 iter 10 value 93.177921 iter 20 value 93.171479 final value 93.171476 converged Fitting Repeat 5 # weights: 305 initial value 114.993163 final value 94.052910 converged Fitting Repeat 1 # weights: 507 initial value 97.469959 iter 10 value 90.667750 iter 20 value 90.343025 final value 90.343023 converged Fitting Repeat 2 # weights: 507 initial value 96.025637 final value 93.482759 converged Fitting Repeat 3 # weights: 507 initial value 130.070827 final value 93.836066 converged Fitting Repeat 4 # weights: 507 initial value 100.871391 final value 93.836066 converged Fitting Repeat 5 # weights: 507 initial value 111.670046 iter 10 value 93.836083 final value 93.836066 converged Fitting Repeat 1 # weights: 103 initial value 100.103365 iter 10 value 94.055214 iter 20 value 93.927509 iter 30 value 93.075938 iter 40 value 93.054270 iter 50 value 93.049244 iter 50 value 93.049244 final value 93.049244 converged Fitting Repeat 2 # weights: 103 initial value 97.797156 iter 10 value 93.588050 iter 20 value 93.164152 iter 30 value 93.065072 iter 40 value 89.827425 iter 50 value 86.334897 iter 60 value 85.864930 iter 70 value 84.878626 iter 80 value 83.069011 iter 90 value 82.007096 iter 100 value 81.623782 final value 81.623782 stopped after 100 iterations Fitting Repeat 3 # weights: 103 initial value 102.738689 iter 10 value 92.667881 iter 20 value 87.487178 iter 30 value 85.703991 iter 40 value 85.538000 iter 50 value 84.342071 iter 60 value 82.685423 iter 70 value 82.059078 iter 80 value 81.896969 final value 81.849440 converged Fitting Repeat 4 # weights: 103 initial value 112.288430 iter 10 value 93.997426 iter 20 value 92.659866 iter 30 value 89.546526 iter 40 value 86.711816 iter 50 value 82.631041 iter 60 value 81.986302 iter 70 value 81.850166 final value 81.849440 converged Fitting Repeat 5 # weights: 103 initial value 96.735437 iter 10 value 94.065942 iter 20 value 94.054872 iter 30 value 93.267021 iter 40 value 93.066912 iter 50 value 92.888944 iter 60 value 85.510643 iter 70 value 82.708756 iter 80 value 82.516813 iter 90 value 82.431466 iter 100 value 81.860895 final value 81.860895 stopped after 100 iterations Fitting Repeat 1 # weights: 305 initial value 114.014843 iter 10 value 93.832590 iter 20 value 90.095540 iter 30 value 84.183751 iter 40 value 83.342631 iter 50 value 83.045719 iter 60 value 81.865006 iter 70 value 80.968174 iter 80 value 80.797935 iter 90 value 80.604187 iter 100 value 80.379041 final value 80.379041 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 100.498377 iter 10 value 93.334562 iter 20 value 87.378542 iter 30 value 83.541860 iter 40 value 82.356870 iter 50 value 82.076718 iter 60 value 81.912146 iter 70 value 81.869293 iter 80 value 81.833584 iter 90 value 81.766435 iter 100 value 81.476359 final value 81.476359 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 100.057983 iter 10 value 93.631472 iter 20 value 93.081640 iter 30 value 93.009615 iter 40 value 91.971310 iter 50 value 89.076532 iter 60 value 85.768608 iter 70 value 83.924582 iter 80 value 83.424287 iter 90 value 83.246759 iter 100 value 82.658406 final value 82.658406 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 103.439308 iter 10 value 94.761013 iter 20 value 87.598733 iter 30 value 83.571747 iter 40 value 83.389924 iter 50 value 83.065678 iter 60 value 82.659986 iter 70 value 82.269661 iter 80 value 81.773467 iter 90 value 81.389417 iter 100 value 81.300442 final value 81.300442 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 100.538730 iter 10 value 94.146469 iter 20 value 92.151226 iter 30 value 88.532187 iter 40 value 85.102280 iter 50 value 84.776801 iter 60 value 84.706219 iter 70 value 84.333941 iter 80 value 83.900927 iter 90 value 83.234574 iter 100 value 82.900970 final value 82.900970 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 103.467906 iter 10 value 94.108718 iter 20 value 89.524828 iter 30 value 84.821153 iter 40 value 84.535595 iter 50 value 84.447791 iter 60 value 84.363662 iter 70 value 82.848545 iter 80 value 82.320611 iter 90 value 81.981294 iter 100 value 81.317556 final value 81.317556 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 107.670231 iter 10 value 94.737765 iter 20 value 92.028071 iter 30 value 84.297562 iter 40 value 82.534953 iter 50 value 82.141077 iter 60 value 81.931183 iter 70 value 81.766894 iter 80 value 81.638766 iter 90 value 81.414405 iter 100 value 80.866171 final value 80.866171 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 126.352923 iter 10 value 90.434103 iter 20 value 85.702707 iter 30 value 85.203204 iter 40 value 84.472515 iter 50 value 82.716372 iter 60 value 82.453080 iter 70 value 82.201409 iter 80 value 81.927129 iter 90 value 81.274742 iter 100 value 80.705198 final value 80.705198 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 112.210321 iter 10 value 94.231904 iter 20 value 93.392418 iter 30 value 88.273472 iter 40 value 84.866869 iter 50 value 83.134301 iter 60 value 82.745114 iter 70 value 82.394026 iter 80 value 81.397895 iter 90 value 81.253467 iter 100 value 81.132281 final value 81.132281 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 124.201882 iter 10 value 93.999826 iter 20 value 90.619577 iter 30 value 84.908302 iter 40 value 83.291709 iter 50 value 82.965549 iter 60 value 82.653866 iter 70 value 82.487686 iter 80 value 82.404094 iter 90 value 82.307038 iter 100 value 82.217090 final value 82.217090 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 96.893138 iter 10 value 93.837880 iter 10 value 93.837879 iter 10 value 93.837879 final value 93.837879 converged Fitting Repeat 2 # weights: 103 initial value 96.754738 final value 94.054387 converged Fitting Repeat 3 # weights: 103 initial value 97.577964 iter 10 value 94.054550 iter 20 value 94.052274 iter 30 value 93.838210 final value 93.836296 converged Fitting Repeat 4 # weights: 103 initial value 94.181933 final value 94.054486 converged Fitting Repeat 5 # weights: 103 initial value 102.085495 final value 94.054623 converged Fitting Repeat 1 # weights: 305 initial value 109.660588 iter 10 value 94.060908 iter 20 value 94.054410 iter 30 value 92.961832 iter 40 value 86.894361 iter 50 value 86.843568 iter 60 value 86.280608 iter 70 value 86.272113 iter 80 value 86.271970 iter 90 value 86.266012 iter 100 value 83.766767 final value 83.766767 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 104.109075 iter 10 value 92.458529 iter 20 value 92.457607 final value 92.456049 converged Fitting Repeat 3 # weights: 305 initial value 98.211774 iter 10 value 94.057160 iter 20 value 94.053073 iter 30 value 86.736120 iter 40 value 84.289624 iter 50 value 84.175285 iter 60 value 84.164553 iter 70 value 84.162138 iter 80 value 83.819672 iter 90 value 83.755843 iter 100 value 83.753704 final value 83.753704 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 112.006772 iter 10 value 94.058121 iter 20 value 93.964980 iter 30 value 83.997464 iter 40 value 83.971680 iter 50 value 83.965401 iter 60 value 83.912396 iter 70 value 83.896513 iter 80 value 83.306102 iter 90 value 80.964421 iter 100 value 80.471655 final value 80.471655 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 114.443989 iter 10 value 92.959541 iter 20 value 92.955502 iter 30 value 92.926694 iter 40 value 91.069102 iter 50 value 88.986906 iter 60 value 88.807737 iter 70 value 88.701852 iter 80 value 88.701534 iter 90 value 88.701374 final value 88.701312 converged Fitting Repeat 1 # weights: 507 initial value 103.752449 iter 10 value 94.059009 iter 20 value 93.747257 iter 30 value 92.955580 iter 40 value 84.896274 iter 50 value 84.328402 iter 60 value 84.298166 iter 70 value 84.294975 iter 70 value 84.294974 iter 70 value 84.294974 final value 84.294974 converged Fitting Repeat 2 # weights: 507 initial value 110.161803 iter 10 value 93.844149 iter 20 value 93.838894 iter 30 value 88.751299 iter 40 value 86.258331 iter 50 value 86.255137 iter 60 value 86.085716 iter 70 value 84.240398 iter 80 value 83.582807 iter 90 value 83.509530 iter 100 value 83.144378 final value 83.144378 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 101.524321 iter 10 value 93.844339 iter 20 value 93.837064 iter 30 value 92.960037 iter 40 value 92.937326 iter 50 value 91.029074 iter 60 value 87.997507 iter 70 value 81.459614 iter 80 value 80.904367 iter 90 value 80.900117 final value 80.899919 converged Fitting Repeat 4 # weights: 507 initial value 98.371734 iter 10 value 93.297032 iter 20 value 92.432758 iter 30 value 84.550838 iter 40 value 83.974549 final value 83.973964 converged Fitting Repeat 5 # weights: 507 initial value 95.678218 iter 10 value 93.843473 iter 20 value 84.922702 iter 30 value 82.423606 iter 40 value 81.291577 iter 50 value 81.276868 iter 60 value 80.993022 iter 70 value 80.806949 iter 80 value 80.715306 iter 90 value 80.713408 final value 80.708491 converged Fitting Repeat 1 # weights: 103 initial value 96.858585 final value 94.484211 converged Fitting Repeat 2 # weights: 103 initial value 94.922580 final value 94.484209 converged Fitting Repeat 3 # weights: 103 initial value 107.412494 final value 94.484211 converged Fitting Repeat 4 # weights: 103 initial value 95.478908 final value 94.484211 converged Fitting Repeat 5 # weights: 103 initial value 95.715415 final value 94.484211 converged Fitting Repeat 1 # weights: 305 initial value 105.718737 final value 94.325945 converged Fitting Repeat 2 # weights: 305 initial value 95.302708 final value 94.473118 converged Fitting Repeat 3 # weights: 305 initial value 97.110064 final value 94.484211 converged Fitting Repeat 4 # weights: 305 initial value 97.729589 final value 94.484211 converged Fitting Repeat 5 # weights: 305 initial value 120.364850 final value 94.484211 converged Fitting Repeat 1 # weights: 507 initial value 110.862486 final value 94.473118 converged Fitting Repeat 2 # weights: 507 initial value 105.390053 final value 94.473118 converged Fitting Repeat 3 # weights: 507 initial value 110.804401 final value 94.473118 converged Fitting Repeat 4 # weights: 507 initial value 106.377550 iter 10 value 93.778458 iter 20 value 92.991421 iter 30 value 92.962533 iter 40 value 92.962305 iter 40 value 92.962305 iter 40 value 92.962305 final value 92.962305 converged Fitting Repeat 5 # weights: 507 initial value 117.847362 iter 10 value 94.386120 final value 94.373383 converged Fitting Repeat 1 # weights: 103 initial value 99.017096 iter 10 value 94.500322 iter 20 value 92.219296 iter 30 value 89.750347 iter 40 value 86.245330 iter 50 value 85.593210 iter 60 value 85.559509 iter 70 value 85.558712 final value 85.558578 converged Fitting Repeat 2 # weights: 103 initial value 100.065435 iter 10 value 94.499123 iter 20 value 94.153278 iter 30 value 92.747529 iter 40 value 92.653320 iter 50 value 90.003614 iter 60 value 87.818574 iter 70 value 87.714916 iter 80 value 87.339484 iter 90 value 87.057956 iter 100 value 84.968395 final value 84.968395 stopped after 100 iterations Fitting Repeat 3 # weights: 103 initial value 102.866344 iter 10 value 94.488597 iter 20 value 94.385954 iter 30 value 94.366105 iter 40 value 93.899892 iter 50 value 88.103199 iter 60 value 86.009457 iter 70 value 85.009183 iter 80 value 84.611274 iter 90 value 84.588411 final value 84.588237 converged Fitting Repeat 4 # weights: 103 initial value 99.892015 iter 10 value 94.366980 iter 20 value 88.395352 iter 30 value 87.980342 iter 40 value 87.762089 iter 50 value 87.232239 iter 60 value 86.325475 iter 70 value 86.203718 iter 80 value 85.450073 iter 90 value 85.105270 iter 100 value 85.029969 final value 85.029969 stopped after 100 iterations Fitting Repeat 5 # weights: 103 initial value 97.011696 iter 10 value 94.488244 iter 20 value 94.371106 iter 30 value 94.343826 iter 40 value 94.173864 iter 50 value 87.217315 iter 60 value 86.535506 iter 70 value 86.391689 iter 80 value 85.850087 iter 90 value 85.306854 iter 100 value 85.126035 final value 85.126035 stopped after 100 iterations Fitting Repeat 1 # weights: 305 initial value 106.329305 iter 10 value 94.537594 iter 20 value 88.395016 iter 30 value 88.019435 iter 40 value 87.737419 iter 50 value 86.960756 iter 60 value 84.795146 iter 70 value 83.703309 iter 80 value 82.832039 iter 90 value 82.172023 iter 100 value 81.841409 final value 81.841409 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 122.018917 iter 10 value 94.412785 iter 20 value 92.448015 iter 30 value 88.671203 iter 40 value 86.725621 iter 50 value 85.140266 iter 60 value 84.747808 iter 70 value 84.580743 iter 80 value 84.539365 iter 90 value 84.331572 iter 100 value 83.838267 final value 83.838267 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 109.770056 iter 10 value 94.819726 iter 20 value 93.658103 iter 30 value 90.215888 iter 40 value 87.782094 iter 50 value 87.548662 iter 60 value 86.121682 iter 70 value 85.772586 iter 80 value 84.173414 iter 90 value 81.862573 iter 100 value 81.112991 final value 81.112991 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 103.131755 iter 10 value 96.062150 iter 20 value 94.516940 iter 30 value 94.260253 iter 40 value 87.087341 iter 50 value 85.289355 iter 60 value 83.313928 iter 70 value 82.717069 iter 80 value 82.081816 iter 90 value 81.561502 iter 100 value 81.511044 final value 81.511044 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 111.045944 iter 10 value 94.699107 iter 20 value 94.459456 iter 30 value 89.472728 iter 40 value 87.813462 iter 50 value 86.357105 iter 60 value 82.843899 iter 70 value 82.360797 iter 80 value 82.061613 iter 90 value 81.943479 iter 100 value 81.799100 final value 81.799100 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 104.099706 iter 10 value 95.126926 iter 20 value 91.232292 iter 30 value 88.392568 iter 40 value 87.293827 iter 50 value 85.538658 iter 60 value 85.444200 iter 70 value 84.854095 iter 80 value 84.715229 iter 90 value 84.543957 iter 100 value 84.044093 final value 84.044093 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 124.615468 iter 10 value 94.403815 iter 20 value 90.130709 iter 30 value 89.573070 iter 40 value 84.216373 iter 50 value 82.747115 iter 60 value 82.074842 iter 70 value 81.650320 iter 80 value 81.251086 iter 90 value 80.968059 iter 100 value 80.817444 final value 80.817444 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 115.234296 iter 10 value 94.806263 iter 20 value 94.382940 iter 30 value 94.320554 iter 40 value 93.561385 iter 50 value 88.138411 iter 60 value 85.647815 iter 70 value 85.248232 iter 80 value 85.112309 iter 90 value 84.063147 iter 100 value 83.592427 final value 83.592427 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 118.470323 iter 10 value 98.406871 iter 20 value 94.640870 iter 30 value 92.931682 iter 40 value 87.670754 iter 50 value 86.762072 iter 60 value 86.095206 iter 70 value 84.102593 iter 80 value 83.261629 iter 90 value 82.893889 iter 100 value 82.560226 final value 82.560226 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 110.409543 iter 10 value 94.856691 iter 20 value 90.707451 iter 30 value 85.725337 iter 40 value 85.053396 iter 50 value 83.228828 iter 60 value 82.773711 iter 70 value 82.495947 iter 80 value 82.155554 iter 90 value 81.847721 iter 100 value 81.757934 final value 81.757934 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 95.269793 final value 94.485669 converged Fitting Repeat 2 # weights: 103 initial value 109.969496 final value 94.485826 converged Fitting Repeat 3 # weights: 103 initial value 105.337630 final value 94.485921 converged Fitting Repeat 4 # weights: 103 initial value 108.692547 final value 94.485738 converged Fitting Repeat 5 # weights: 103 initial value 98.887983 final value 94.485657 converged Fitting Repeat 1 # weights: 305 initial value 95.739712 iter 10 value 94.390464 iter 20 value 94.312387 iter 30 value 94.302219 iter 40 value 92.839715 iter 50 value 89.011496 iter 60 value 88.934378 iter 70 value 88.931167 iter 80 value 83.695422 iter 90 value 82.880148 iter 100 value 82.447671 final value 82.447671 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 115.505197 iter 10 value 94.489168 iter 20 value 94.421278 iter 30 value 89.191138 iter 40 value 87.856220 iter 50 value 86.937184 iter 60 value 85.209580 iter 70 value 85.171380 iter 80 value 85.103553 iter 90 value 85.088097 final value 85.087885 converged Fitting Repeat 3 # weights: 305 initial value 97.585282 iter 10 value 94.486422 iter 20 value 94.466240 iter 30 value 94.312054 iter 40 value 93.263227 iter 50 value 93.078016 iter 60 value 92.850720 iter 70 value 92.479563 iter 80 value 84.145048 iter 90 value 84.125615 iter 100 value 84.101782 final value 84.101782 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 111.475990 iter 10 value 94.489212 iter 20 value 94.469052 iter 30 value 91.127762 iter 40 value 87.232172 iter 50 value 87.070490 final value 87.070425 converged Fitting Repeat 5 # weights: 305 initial value 95.942125 iter 10 value 94.477535 iter 20 value 94.461818 iter 30 value 94.251965 iter 40 value 92.837918 final value 92.837916 converged Fitting Repeat 1 # weights: 507 initial value 123.078119 iter 10 value 94.425421 iter 20 value 94.300218 iter 30 value 94.295898 iter 40 value 94.292311 final value 94.292284 converged Fitting Repeat 2 # weights: 507 initial value 107.887586 iter 10 value 94.394267 iter 20 value 94.391478 iter 30 value 94.388473 iter 40 value 94.386040 iter 50 value 89.113370 iter 60 value 89.077145 iter 70 value 88.933044 iter 80 value 87.821534 iter 90 value 87.751009 iter 100 value 87.749234 final value 87.749234 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 94.536053 iter 10 value 87.945858 iter 20 value 87.739265 iter 30 value 87.736512 iter 40 value 86.269971 iter 50 value 86.231482 iter 60 value 85.939381 iter 70 value 85.740874 iter 80 value 85.729296 iter 90 value 85.703753 iter 100 value 85.601666 final value 85.601666 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 97.787164 iter 10 value 94.492080 iter 20 value 94.478340 iter 30 value 87.763928 iter 40 value 87.242080 iter 50 value 87.240314 iter 60 value 87.234993 iter 70 value 87.232990 iter 80 value 87.232775 iter 90 value 87.211135 iter 100 value 87.012760 final value 87.012760 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 98.391596 iter 10 value 94.312756 iter 20 value 94.060606 iter 30 value 89.438577 iter 40 value 89.278281 iter 50 value 89.277630 iter 60 value 89.254405 iter 70 value 84.360513 iter 80 value 83.231117 iter 90 value 82.987732 iter 100 value 82.450080 final value 82.450080 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 96.816360 final value 94.484211 converged Fitting Repeat 2 # weights: 103 initial value 101.470869 final value 94.026542 converged Fitting Repeat 3 # weights: 103 initial value 100.393670 final value 94.484211 converged Fitting Repeat 4 # weights: 103 initial value 98.392981 final value 94.484211 converged Fitting Repeat 5 # weights: 103 initial value 102.972956 final value 94.484211 converged Fitting Repeat 1 # weights: 305 initial value 107.490526 final value 94.484211 converged Fitting Repeat 2 # weights: 305 initial value 107.266482 final value 94.484211 converged Fitting Repeat 3 # weights: 305 initial value 95.391725 final value 94.484211 converged Fitting Repeat 4 # weights: 305 initial value 95.692373 final value 94.484211 converged Fitting Repeat 5 # weights: 305 initial value 96.058681 final value 94.484211 converged Fitting Repeat 1 # weights: 507 initial value 98.341440 iter 10 value 93.157468 iter 10 value 93.157468 iter 10 value 93.157468 final value 93.157468 converged Fitting Repeat 2 # weights: 507 initial value 109.642761 final value 94.484211 converged Fitting Repeat 3 # weights: 507 initial value 97.671580 iter 10 value 94.339179 iter 20 value 88.756995 iter 30 value 87.378096 iter 40 value 87.030933 final value 87.030791 converged Fitting Repeat 4 # weights: 507 initial value 106.186481 iter 10 value 92.941167 iter 20 value 92.542429 iter 30 value 92.541496 iter 30 value 92.541496 iter 30 value 92.541496 final value 92.541496 converged Fitting Repeat 5 # weights: 507 initial value 104.792805 iter 10 value 93.299991 iter 20 value 84.676066 iter 30 value 83.198495 final value 83.196405 converged Fitting Repeat 1 # weights: 103 initial value 105.611007 iter 10 value 94.322781 iter 20 value 94.133978 iter 30 value 94.126473 iter 40 value 92.607701 iter 50 value 85.854520 iter 60 value 84.914219 iter 70 value 83.164748 iter 80 value 82.502060 iter 90 value 82.329710 final value 82.322789 converged Fitting Repeat 2 # weights: 103 initial value 97.574670 iter 10 value 94.486491 iter 20 value 92.232280 iter 30 value 85.695102 iter 40 value 84.991086 iter 50 value 83.763015 iter 60 value 81.855296 iter 70 value 81.201075 iter 80 value 81.100000 final value 81.099836 converged Fitting Repeat 3 # weights: 103 initial value 98.381106 iter 10 value 94.500360 iter 20 value 84.606551 iter 30 value 83.314889 iter 40 value 82.959117 iter 50 value 82.583220 iter 60 value 82.028687 iter 70 value 81.930261 iter 80 value 79.932047 iter 90 value 79.875761 iter 100 value 79.856429 final value 79.856429 stopped after 100 iterations Fitting Repeat 4 # weights: 103 initial value 94.801604 iter 10 value 89.585605 iter 20 value 83.163112 iter 30 value 82.275552 iter 40 value 82.068272 iter 50 value 81.356356 iter 60 value 81.314868 final value 81.314865 converged Fitting Repeat 5 # weights: 103 initial value 98.695532 iter 10 value 94.394098 iter 20 value 94.106297 iter 30 value 84.115781 iter 40 value 83.068244 iter 50 value 82.195494 iter 60 value 81.322888 iter 70 value 81.237478 iter 80 value 81.133579 iter 90 value 81.099842 final value 81.099836 converged Fitting Repeat 1 # weights: 305 initial value 120.703414 iter 10 value 94.143223 iter 20 value 84.650016 iter 30 value 81.985756 iter 40 value 79.705822 iter 50 value 79.019510 iter 60 value 78.761386 iter 70 value 78.541506 iter 80 value 78.529634 iter 90 value 78.494755 iter 100 value 78.457331 final value 78.457331 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 126.154577 iter 10 value 88.619294 iter 20 value 83.563449 iter 30 value 80.358946 iter 40 value 79.280552 iter 50 value 79.099072 iter 60 value 79.019466 iter 70 value 78.854309 iter 80 value 78.672543 iter 90 value 78.365886 iter 100 value 78.198708 final value 78.198708 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 103.049223 iter 10 value 94.497803 iter 20 value 94.033385 iter 30 value 83.410571 iter 40 value 82.327958 iter 50 value 81.761693 iter 60 value 81.201365 iter 70 value 81.002689 iter 80 value 80.560700 iter 90 value 79.227305 iter 100 value 78.779237 final value 78.779237 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 100.082672 iter 10 value 94.052979 iter 20 value 93.819772 iter 30 value 91.010502 iter 40 value 87.712105 iter 50 value 83.731834 iter 60 value 79.757290 iter 70 value 79.037492 iter 80 value 78.781125 iter 90 value 78.443143 iter 100 value 78.244255 final value 78.244255 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 106.436193 iter 10 value 94.510190 iter 20 value 94.318347 iter 30 value 93.255827 iter 40 value 91.716688 iter 50 value 83.534641 iter 60 value 80.417149 iter 70 value 79.628207 iter 80 value 78.969789 iter 90 value 78.827333 iter 100 value 78.747934 final value 78.747934 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 103.780850 iter 10 value 94.632055 iter 20 value 93.209054 iter 30 value 90.752346 iter 40 value 85.581054 iter 50 value 80.449524 iter 60 value 79.678734 iter 70 value 78.750860 iter 80 value 78.572586 iter 90 value 78.471659 iter 100 value 78.450582 final value 78.450582 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 108.774596 iter 10 value 96.243768 iter 20 value 89.962295 iter 30 value 85.351219 iter 40 value 84.070152 iter 50 value 82.922796 iter 60 value 82.019388 iter 70 value 81.294243 iter 80 value 79.617105 iter 90 value 79.132740 iter 100 value 78.779378 final value 78.779378 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 113.159271 iter 10 value 95.799229 iter 20 value 93.129745 iter 30 value 83.605138 iter 40 value 81.140172 iter 50 value 79.459618 iter 60 value 78.718542 iter 70 value 78.531871 iter 80 value 78.528172 iter 90 value 78.451811 iter 100 value 78.241544 final value 78.241544 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 111.200110 iter 10 value 94.374804 iter 20 value 83.866827 iter 30 value 82.741638 iter 40 value 81.921188 iter 50 value 81.376800 iter 60 value 80.040728 iter 70 value 79.437269 iter 80 value 79.192509 iter 90 value 78.658206 iter 100 value 78.497852 final value 78.497852 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 119.812464 iter 10 value 93.974639 iter 20 value 87.184665 iter 30 value 84.563331 iter 40 value 83.923750 iter 50 value 82.121663 iter 60 value 80.250286 iter 70 value 79.443300 iter 80 value 78.910894 iter 90 value 78.595391 iter 100 value 78.481933 final value 78.481933 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 105.657315 final value 94.486278 converged Fitting Repeat 2 # weights: 103 initial value 105.735649 iter 10 value 94.485775 final value 94.484275 converged Fitting Repeat 3 # weights: 103 initial value 98.164977 iter 10 value 94.485804 final value 94.484215 converged Fitting Repeat 4 # weights: 103 initial value 100.702375 iter 10 value 94.485881 final value 94.484319 converged Fitting Repeat 5 # weights: 103 initial value 99.690173 iter 10 value 94.028252 final value 94.028248 converged Fitting Repeat 1 # weights: 305 initial value 99.990861 iter 10 value 94.488768 iter 20 value 94.481028 iter 30 value 92.636458 final value 92.636396 converged Fitting Repeat 2 # weights: 305 initial value 103.324011 iter 10 value 92.562322 iter 20 value 91.722782 final value 91.722546 converged Fitting Repeat 3 # weights: 305 initial value 95.812617 iter 10 value 94.481459 iter 20 value 94.322796 final value 94.027652 converged Fitting Repeat 4 # weights: 305 initial value 99.269142 iter 10 value 94.477230 final value 94.027309 converged Fitting Repeat 5 # weights: 305 initial value 96.932147 iter 10 value 94.488628 iter 20 value 94.054066 iter 30 value 90.693897 iter 40 value 90.659899 iter 50 value 90.658874 iter 60 value 90.656277 iter 70 value 90.618934 iter 80 value 90.617359 iter 90 value 90.616314 iter 100 value 90.616239 final value 90.616239 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 119.950874 iter 10 value 94.123536 iter 20 value 94.050487 iter 30 value 91.505960 iter 40 value 91.003064 iter 50 value 89.815514 iter 60 value 89.796329 iter 70 value 89.773131 iter 80 value 89.771074 iter 90 value 82.271740 iter 100 value 80.313042 final value 80.313042 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 109.687023 iter 10 value 94.492211 iter 20 value 92.776414 final value 92.637324 converged Fitting Repeat 3 # weights: 507 initial value 101.554057 iter 10 value 92.391778 iter 20 value 87.493289 iter 30 value 83.096192 iter 40 value 82.299299 iter 50 value 81.920394 iter 60 value 80.747517 iter 70 value 80.746818 iter 80 value 80.442647 iter 90 value 79.996451 iter 100 value 78.789712 final value 78.789712 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 108.598560 iter 10 value 93.374029 iter 20 value 92.964330 iter 30 value 86.015087 iter 40 value 85.623642 iter 50 value 85.582688 final value 85.582351 converged Fitting Repeat 5 # weights: 507 initial value 111.129372 iter 10 value 94.492838 iter 20 value 94.484638 iter 30 value 92.636835 final value 92.636715 converged Fitting Repeat 1 # weights: 507 initial value 125.374340 iter 10 value 117.766696 iter 20 value 115.714927 iter 30 value 105.102116 iter 40 value 104.909369 iter 50 value 104.906396 iter 60 value 102.024882 iter 70 value 100.085337 iter 80 value 99.537370 iter 90 value 99.521088 iter 100 value 99.518062 final value 99.518062 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 120.617443 iter 10 value 117.624607 iter 20 value 117.600665 iter 30 value 117.506634 iter 40 value 117.499275 iter 50 value 115.666645 iter 60 value 107.447687 iter 70 value 106.956058 iter 80 value 106.796444 final value 106.770748 converged Fitting Repeat 3 # weights: 507 initial value 134.109278 iter 10 value 117.767217 iter 20 value 117.759667 final value 117.758997 converged Fitting Repeat 4 # weights: 507 initial value 125.386829 iter 10 value 117.766984 iter 20 value 117.763119 iter 30 value 117.760610 iter 40 value 115.124234 final value 114.657842 converged Fitting Repeat 5 # weights: 507 initial value 125.244561 iter 10 value 117.746514 iter 20 value 117.689506 iter 30 value 117.605671 iter 40 value 117.526812 iter 50 value 117.509969 final value 117.509860 converged svmRadial ranger Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases RUNIT TEST PROTOCOL -- Sat Jul 6 05:49:07 2024 *********************************************** Number of test functions: 7 Number of errors: 0 Number of failures: 0 1 Test Suite : HPiP RUnit Tests - 7 test functions, 0 errors, 0 failures Number of test functions: 7 Number of errors: 0 Number of failures: 0 Warning messages: 1: `repeats` has no meaning for this resampling method. 2: executing %dopar% sequentially: no parallel backend registered > > > > > proc.time() user system elapsed 54.844 1.335 73.953
HPiP.Rcheck/HPiP-Ex.timings
name | user | system | elapsed | |
FSmethod | 38.083 | 0.615 | 38.773 | |
FreqInteractors | 0.276 | 0.016 | 0.293 | |
calculateAAC | 0.046 | 0.000 | 0.046 | |
calculateAutocor | 0.707 | 0.016 | 0.725 | |
calculateCTDC | 0.092 | 0.000 | 0.092 | |
calculateCTDD | 0.738 | 0.000 | 0.740 | |
calculateCTDT | 0.265 | 0.000 | 0.266 | |
calculateCTriad | 0.447 | 0.012 | 0.460 | |
calculateDC | 0.127 | 0.000 | 0.127 | |
calculateF | 0.432 | 0.000 | 0.433 | |
calculateKSAAP | 0.138 | 0.000 | 0.139 | |
calculateQD_Sm | 2.365 | 0.048 | 2.419 | |
calculateTC | 2.354 | 0.024 | 2.383 | |
calculateTC_Sm | 0.346 | 0.000 | 0.347 | |
corr_plot | 38.181 | 0.356 | 38.599 | |
enrichfindP | 0.537 | 0.044 | 23.625 | |
enrichfind_hp | 0.086 | 0.020 | 1.844 | |
enrichplot | 0.512 | 0.011 | 0.525 | |
filter_missing_values | 0.001 | 0.001 | 0.002 | |
getFASTA | 0.089 | 0.008 | 6.121 | |
getHPI | 0.001 | 0.000 | 0.001 | |
get_negativePPI | 0.002 | 0.000 | 0.002 | |
get_positivePPI | 0 | 0 | 0 | |
impute_missing_data | 0.002 | 0.000 | 0.001 | |
plotPPI | 0.088 | 0.000 | 0.088 | |
pred_ensembel | 19.589 | 0.339 | 17.583 | |
var_imp | 40.521 | 0.795 | 41.396 | |