BioC experimental data: CHECK report for waveTilingData on windows2.bioconductor.org
This page was generated on 2015-10-24 19:25:50 -0400 (Sat, 24 Oct 2015).
waveTilingData 1.7.0 Kristof De Beuf
Snapshot Date: 2015-10-24 10:15:05 -0400 (Sat, 24 Oct 2015) | URL: https://hedgehog.fhcrc.org/bioc-data/trunk/experiment/pkgs/waveTilingData | Last Changed Rev: 3462 / Revision: 3473 | Last Changed Date: 2015-10-13 16:20:35 -0400 (Tue, 13 Oct 2015) |
| linux2.bioconductor.org | Linux (Ubuntu 14.04.2 LTS) / x86_64 | NotNeeded | OK | OK | |  |
windows2.bioconductor.org | Windows Server 2012 R2 Enterprise SP1 (64-bit) / x64 | NotNeeded | OK | [ OK ] | OK | |
morelia | Mac OS X Mavericks (10.9.5) / x86_64 | NotNeeded | OK | OK | OK | |
Summary
Package: waveTilingData
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Version: 1.7.0
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Command: rm -rf waveTilingData.buildbin-libdir waveTilingData.Rcheck && mkdir waveTilingData.buildbin-libdir waveTilingData.Rcheck && c:\biocbld\bbs-3.3-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=waveTilingData.buildbin-libdir waveTilingData_1.7.0.tar.gz >waveTilingData.Rcheck\00install.out 2>&1 && cp waveTilingData.Rcheck\00install.out waveTilingData-install.out && c:\biocbld\bbs-3.3-bioc\R\bin\R.exe CMD check --library=waveTilingData.buildbin-libdir --install="check:waveTilingData-install.out" --force-multiarch --no-vignettes --timings waveTilingData_1.7.0.tar.gz
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StartedAt: 2015-10-24 13:07:25 -0400 (Sat, 24 Oct 2015)
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EndedAt: 2015-10-24 13:10:57 -0400 (Sat, 24 Oct 2015)
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EllapsedTime: 212.1 seconds
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RetCode: 0
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Status: OK
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CheckDir: waveTilingData.Rcheck
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Warnings: 0
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Command output
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### Running command:
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### rm -rf waveTilingData.buildbin-libdir waveTilingData.Rcheck && mkdir waveTilingData.buildbin-libdir waveTilingData.Rcheck && c:\biocbld\bbs-3.3-bioc\R\bin\R.exe CMD INSTALL --build --merge-multiarch --library=waveTilingData.buildbin-libdir waveTilingData_1.7.0.tar.gz >waveTilingData.Rcheck\00install.out 2>&1 && cp waveTilingData.Rcheck\00install.out waveTilingData-install.out && c:\biocbld\bbs-3.3-bioc\R\bin\R.exe CMD check --library=waveTilingData.buildbin-libdir --install="check:waveTilingData-install.out" --force-multiarch --no-vignettes --timings waveTilingData_1.7.0.tar.gz
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* using log directory 'c:/biocbld/bbs-3.3-data-experiment/meat/waveTilingData.Rcheck'
* using R Under development (unstable) (2015-09-22 r69418)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'waveTilingData/DESCRIPTION' ... OK
* this is package 'waveTilingData' version '1.7.0'
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'waveTilingData' can be installed ... OK
* checking installed package size ... NOTE
installed size is 240.8Mb
sub-directories of 1Mb or more:
data 240.8Mb
* checking package directory ... OK
* checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the namespace can be loaded with stated dependencies ... OK
** checking whether the namespace can be unloaded cleanly ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... NOTE
Error in .requirePackage(package) :
unable to find required package 'waveTiling'
Calls: <Anonymous> ... .findInheritedMethods -> getClass -> getClassDef -> .requirePackage
Execution halted
* checking data for ASCII and uncompressed saves ... OK
* checking examples ...
** running examples for arch 'i386' ... [56s] OK
Examples with CPU or elapsed time > 5s
user system elapsed
leafdev 26.61 0.66 27.34
leafdevBQ 17.18 0.45 17.66
leafdevMapAndFilterTAIR9 8.68 0.11 8.80
** running examples for arch 'x64' ... [48s] OK
Examples with CPU or elapsed time > 5s
user system elapsed
leafdev 23.59 0.44 24.07
leafdevBQ 14.61 0.31 14.92
leafdevMapAndFilterTAIR9 7.06 0.09 7.16
* checking PDF version of manual ... OK
* DONE
Status: 3 NOTEs
See
'c:/biocbld/bbs-3.3-data-experiment/meat/waveTilingData.Rcheck/00check.log'
for details.
waveTilingData.Rcheck/00install.out:
install for i386
* installing *source* package 'waveTilingData' ...
** data
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
install for x64
* installing *source* package 'waveTilingData' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'waveTilingData' as waveTilingData_1.7.0.zip
* DONE (waveTilingData)
waveTilingData.Rcheck/examples_i386/waveTilingData-Ex.timings:
name | user | system | elapsed
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leafdev | 26.61 | 0.66 | 27.34 |
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leafdevBQ | 17.18 | 0.45 | 17.66 |
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leafdevFit | 0.8 | 0.0 | 0.8 |
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leafdevInfCompare | 0.77 | 0.04 | 0.81 |
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leafdevMapAndFilterTAIR9 | 8.68 | 0.11 | 8.80 |
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waveTilingData.Rcheck/examples_x64/waveTilingData-Ex.timings:
name | user | system | elapsed
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leafdev | 23.59 | 0.44 | 24.07 |
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leafdevBQ | 14.61 | 0.31 | 14.92 |
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leafdevFit | 0.70 | 0.03 | 0.73 |
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leafdevInfCompare | 0.71 | 0.05 | 0.75 |
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leafdevMapAndFilterTAIR9 | 7.06 | 0.09 | 7.16 |
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