BioC experimental data: CHECK report for waveTilingData on linux2.bioconductor.org
This page was generated on 2015-10-24 19:25:31 -0400 (Sat, 24 Oct 2015).
waveTilingData 1.7.0 Kristof De Beuf
Snapshot Date: 2015-10-24 10:15:05 -0400 (Sat, 24 Oct 2015) | URL: https://hedgehog.fhcrc.org/bioc-data/trunk/experiment/pkgs/waveTilingData | Last Changed Rev: 3462 / Revision: 3473 | Last Changed Date: 2015-10-13 16:20:35 -0400 (Tue, 13 Oct 2015) |
| linux2.bioconductor.org | Linux (Ubuntu 14.04.2 LTS) / x86_64 | NotNeeded | OK | [ OK ] | |  |
windows2.bioconductor.org | Windows Server 2012 R2 Enterprise SP1 (64-bit) / x64 | NotNeeded | OK | OK | OK | |
morelia | Mac OS X Mavericks (10.9.5) / x86_64 | NotNeeded | OK | OK | OK | |
Summary
Package: waveTilingData |
Version: 1.7.0 |
Command: /home/biocbuild/bbs-3.3-bioc/R/bin/R CMD check --no-vignettes --timings waveTilingData_1.7.0.tar.gz |
StartedAt: 2015-10-24 12:55:02 -0400 (Sat, 24 Oct 2015) |
EndedAt: 2015-10-24 12:57:33 -0400 (Sat, 24 Oct 2015) |
EllapsedTime: 151.4 seconds |
RetCode: 0 |
Status: OK |
CheckDir: waveTilingData.Rcheck |
Warnings: 0 |
Command output
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### Running command:
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### /home/biocbuild/bbs-3.3-bioc/R/bin/R CMD check --no-vignettes --timings waveTilingData_1.7.0.tar.gz
###
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* using log directory ‘/home/biocbuild/bbs-3.3-data-experiment/meat/waveTilingData.Rcheck’
* using R Under development (unstable) (2015-09-09 r69333)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘waveTilingData/DESCRIPTION’ ... OK
* this is package ‘waveTilingData’ version ‘1.7.0’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘waveTilingData’ can be installed ... [1s/1s] OK
* checking installed package size ... NOTE
installed size is 240.9Mb
sub-directories of 1Mb or more:
data 240.8Mb
* checking package directory ... OK
* checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... NOTE
Error in .requirePackage(package) :
unable to find required package 'waveTiling'
Calls: <Anonymous> ... .findInheritedMethods -> getClass -> getClassDef -> .requirePackage
Execution halted
* checking data for ASCII and uncompressed saves ... OK
* checking examples ... [65s/65s] OK
Examples with CPU or elapsed time > 5s
user system elapsed
leafdev 30.198 0.383 30.620
leafdevBQ 22.684 0.216 22.922
leafdevMapAndFilterTAIR9 9.507 0.052 9.559
* checking PDF version of manual ... OK
* DONE
Status: 3 NOTEs
See
‘/home/biocbuild/bbs-3.3-data-experiment/meat/waveTilingData.Rcheck/00check.log’
for details.
waveTilingData.Rcheck/00install.out:
* installing *source* package ‘waveTilingData’ ...
** data
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (waveTilingData)
waveTilingData.Rcheck/waveTilingData-Ex.timings:
name | user | system | elapsed
|
leafdev | 30.198 | 0.383 | 30.620 |
|
leafdevBQ | 22.684 | 0.216 | 22.922 |
|
leafdevFit | 0.682 | 0.032 | 0.714 |
|
leafdevInfCompare | 0.841 | 0.020 | 0.861 |
|
leafdevMapAndFilterTAIR9 | 9.507 | 0.052 | 9.559 |
|