BioC experimental data: CHECK report for geuvPack on morelia
This page was generated on 2015-11-25 16:26:40 -0800 (Wed, 25 Nov 2015).
geuvPack 1.3.1 VJ Carey
Snapshot Date: 2015-11-25 07:17:28 -0800 (Wed, 25 Nov 2015) | URL: https://hedgehog.fhcrc.org/bioc-data/trunk/experiment/pkgs/geuvPack | Last Changed Rev: 3476 / Revision: 3504 | Last Changed Date: 2015-11-01 20:43:43 -0800 (Sun, 01 Nov 2015) |
| zin2 | Linux (Ubuntu 14.04.2 LTS) / x86_64 | NotNeeded | OK | OK | |  |
moscato2 | Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64 | NotNeeded | OK | OK | OK | |
morelia | Mac OS X Mavericks (10.9.5) / x86_64 | NotNeeded | OK | [ OK ] | OK | |
Summary
Package: geuvPack |
Version: 1.3.1 |
Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD check --no-vignettes --timings geuvPack_1.3.1.tar.gz |
StartedAt: 2015-11-25 10:36:29 -0800 (Wed, 25 Nov 2015) |
EndedAt: 2015-11-25 10:38:49 -0800 (Wed, 25 Nov 2015) |
EllapsedTime: 140.7 seconds |
RetCode: 0 |
Status: OK |
CheckDir: geuvPack.Rcheck |
Warnings: 0 |
Command output
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### Running command:
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### /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD check --no-vignettes --timings geuvPack_1.3.1.tar.gz
###
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* using log directory ‘/Users/biocbuild/bbs-3.3-data-experiment/meat/geuvPack.Rcheck’
* using R Under development (unstable) (2015-11-08 r69614)
* using platform: x86_64-apple-darwin13.4.0 (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘geuvPack/DESCRIPTION’ ... OK
* this is package ‘geuvPack’ version ‘1.3.1’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘geuvPack’ can be installed ... [9s/10s] OK
* checking installed package size ... NOTE
installed size is 78.9Mb
sub-directories of 1Mb or more:
data 78.8Mb
* checking package directory ... OK
* checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ... [13s/15s] OK
Examples with CPU or elapsed time > 5s
user system elapsed
geuFPKM 9.112 0.258 10.329
* checking PDF version of manual ... OK
* DONE
Status: 2 NOTEs
See
‘/Users/biocbuild/bbs-3.3-data-experiment/meat/geuvPack.Rcheck/00check.log’
for details.
geuvPack.Rcheck/00install.out:
* installing *source* package ‘geuvPack’ ...
** R
** data
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (geuvPack)
geuvPack.Rcheck/geuvPack-Ex.timings:
name | user | system | elapsed
|
geuFPKM | 9.112 | 0.258 | 10.329 |
|
gtpath | 0.001 | 0.001 | 0.001 |
|