Britta Velten
| Snapshot Date: 2024-06-09 14:00 -0400 (Sun, 09 Jun 2024) |
| git_url: https://git.bioconductor.org/packages/graper |
| git_branch: devel |
| git_last_commit: 7b45fcc |
| git_last_commit_date: 2024-04-30 11:11:42 -0400 (Tue, 30 Apr 2024) |
| Back to Multiple platform build/check report for BioC 3.20: simplified long |
|
This page was generated on 2024-06-11 15:41 -0400 (Tue, 11 Jun 2024).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 22.04.3 LTS) | x86_64 | 4.4.0 RC (2024-04-16 r86468) -- "Puppy Cup" | 4679 |
| palomino4 | Windows Server 2022 Datacenter | x64 | 4.4.0 RC (2024-04-16 r86468 ucrt) -- "Puppy Cup" | 4414 |
| merida1 | macOS 12.7.4 Monterey | x86_64 | 4.4.0 Patched (2024-04-24 r86482) -- "Puppy Cup" | 4441 |
| kjohnson1 | macOS 13.6.6 Ventura | arm64 | 4.4.0 Patched (2024-04-24 r86482) -- "Puppy Cup" | 4394 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 882/2239 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graper 1.21.0 (landing page) Britta Velten
| nebbiolo2 | Linux (Ubuntu 22.04.3 LTS) / x86_64 | OK | OK | OK | | ||||||||
| palomino4 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | | ||||||||
| merida1 | macOS 12.7.4 Monterey / x86_64 | OK | OK | WARNINGS | OK | | ||||||||
| kjohnson1 | macOS 13.6.6 Ventura / arm64 | OK | OK | WARNINGS | OK | | ||||||||
|
To the developers/maintainers of the graper package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: graper |
| Version: 1.21.0 |
| Command: /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.21.0.tar.gz |
| StartedAt: 2024-06-10 04:27:59 -0400 (Mon, 10 Jun 2024) |
| EndedAt: 2024-06-10 04:30:11 -0400 (Mon, 10 Jun 2024) |
| EllapsedTime: 131.4 seconds |
| RetCode: 0 |
| Status: WARNINGS |
| CheckDir: graper.Rcheck |
| Warnings: 1 |
##############################################################################
##############################################################################
###
### Running command:
###
### /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.21.0.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/Users/biocbuild/bbs-3.20-bioc/meat/graper.Rcheck’
* using R version 4.4.0 Patched (2024-04-24 r86482)
* using platform: x86_64-apple-darwin20
* R was compiled by
Apple clang version 14.0.0 (clang-1400.0.29.202)
GNU Fortran (GCC) 12.2.0
* running under: macOS Monterey 12.7.4
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.21.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... WARNING
Found the following significant warnings:
/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/BH/include/boost/math/tools/config.hpp:23:6: warning: "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-W#warnings]
# warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)"
See ‘/Users/biocbuild/bbs-3.20-bioc/meat/graper.Rcheck/00install.out’ for details.
* used C++ compiler: ‘Apple clang version 14.0.0 (clang-1400.0.29.202)’
* used SDK: ‘MacOSX11.3.sdk’
* checking C++ specification ... NOTE
Specified C++11: please drop specification unless essential
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE
Status: 1 WARNING, 3 NOTEs
See
‘/Users/biocbuild/bbs-3.20-bioc/meat/graper.Rcheck/00check.log’
for details.
graper.Rcheck/00install.out
##############################################################################
##############################################################################
###
### Running command:
###
### /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL graper
###
##############################################################################
##############################################################################
* installing to library ‘/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library’
* installing *source* package ‘graper’ ...
** using staged installation
** libs
using C++ compiler: ‘Apple clang version 14.0.0 (clang-1400.0.29.202)’
using C++11
using SDK: ‘MacOSX11.3.sdk’
clang++ -arch x86_64 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/BH/include' -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o
clang++ -arch x86_64 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/BH/include' -I/opt/R/x86_64/include -fPIC -falign-functions=64 -Wall -g -O2 -c fit_graper.cpp -o fit_graper.o
In file included from fit_graper.cpp:4:
In file included from ./graper_linear_dense_ff.h:2:
In file included from /Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/BH/include/boost/math/special_functions/digamma.hpp:15:
In file included from /Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/BH/include/boost/math/special_functions/math_fwd.hpp:29:
In file included from /Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/BH/include/boost/math/special_functions/detail/round_fwd.hpp:11:
/Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/BH/include/boost/math/tools/config.hpp:23:6: warning: "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-W#warnings]
# warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)"
^
1 warning generated.
clang++ -arch x86_64 -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/x86_64/lib -o graper.so RcppExports.o fit_graper.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/opt/gfortran/lib/gcc/x86_64-apple-darwin20.0/12.2.0 -L/opt/gfortran/lib -lgfortran -lquadmath -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Library/Frameworks/R.framework/Versions/4.4-x86_64/Resources/library/00LOCK-graper/00new/graper/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (graper)
graper.Rcheck/tests/testthat.Rout
R version 4.4.0 Patched (2024-04-24 r86482) -- "Puppy Cup"
Copyright (C) 2024 The R Foundation for Statistical Computing
Platform: x86_64-apple-darwin20
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-849.284
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-570.748
ELB improved by 278.536
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-508.456
ELB improved by 62.2921
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-469.779
ELB improved by 38.6769
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-453.116
ELB improved by 16.6635
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.293
ELB improved by 6.82256
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.963
ELB improved by 3.32984
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.956
ELB improved by 2.00732
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.502
ELB improved by 1.45416
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.305
ELB improved by 1.19709
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.243
ELB improved by 1.06151
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.268
ELB improved by 0.974768
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.363
ELB improved by 0.905684
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.522
ELB improved by 0.840578
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.749
ELB improved by 0.773257
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.048
ELB improved by 0.701051
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.424
ELB improved by 0.623595
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.882
ELB improved by 0.542617
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.42
ELB improved by 0.461619
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.035
ELB improved by 0.384949
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.718
ELB improved by 0.316496
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.46
ELB improved by 0.258646
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.248
ELB improved by 0.211989
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.072
ELB improved by 0.175681
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.924
ELB improved by 0.148106
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.797
ELB improved by 0.127453
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.685
ELB improved by 0.112078
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.584
ELB improved by 0.100648
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.492
ELB improved by 0.0921602
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.406
ELB improved by 0.0858894
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.324
ELB improved by 0.0813337
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.246
ELB improved by 0.0781572
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.17
ELB improved by 0.0761471
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.095
ELB improved by 0.0751834
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.02
ELB improved by 0.0752202
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.943
ELB improved by 0.0762732
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.865
ELB improved by 0.0784165
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.783
ELB improved by 0.0817817
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.697
ELB improved by 0.0865633
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.604
ELB improved by 0.0930246
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.502
ELB improved by 0.101507
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.39
ELB improved by 0.112435
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.263
ELB improved by 0.126323
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.12
ELB improved by 0.143765
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.954
ELB improved by 0.16542
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.762
ELB improved by 0.19198
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.538
ELB improved by 0.224103
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.276
ELB improved by 0.262323
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.969
ELB improved by 0.306893
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.611
ELB improved by 0.357535
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.198
ELB improved by 0.413096
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.727
ELB improved by 0.471172
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.199
ELB improved by 0.527977
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.62
ELB improved by 0.578802
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.001
ELB improved by 0.619225
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.355
ELB improved by 0.646594
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.694
ELB improved by 0.660809
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.03
ELB improved by 0.663769
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.372
ELB improved by 0.657745
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.728
ELB improved by 0.64376
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.107
ELB improved by 0.620996
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.52
ELB improved by 0.587582
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.978
ELB improved by 0.542232
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.492
ELB improved by 0.485753
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.07
ELB improved by 0.421552
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.715
ELB improved by 0.354936
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.424
ELB improved by 0.291705
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.187
ELB improved by 0.236901
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.992
ELB improved by 0.194498
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.824
ELB improved by 0.168482
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.658
ELB improved by 0.165641
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.46
ELB improved by 0.198459
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.186
ELB improved by 0.273562
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.838
ELB improved by 0.348439
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.475
ELB improved by 0.362867
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.134
ELB improved by 0.340638
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.813
ELB improved by 0.321439
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.498
ELB improved by 0.314948
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.173
ELB improved by 0.324841
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.818
ELB improved by 0.35473
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.415
ELB improved by 0.402926
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.972
ELB improved by 0.443607
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.549
ELB improved by 0.422716
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.202
ELB improved by 0.346934
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.929
ELB improved by 0.272696
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.715
ELB improved by 0.214588
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.551
ELB improved by 0.16411
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.43
ELB improved by 0.120224
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.344
ELB improved by 0.0868287
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.279
ELB improved by 0.0645337
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.229
ELB improved by 0.0505803
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.187
ELB improved by 0.0417763
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.151
ELB improved by 0.0358374
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.12
ELB improved by 0.031396
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.092
ELB improved by 0.0277164
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.067
ELB improved by 0.0244567
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.046
ELB improved by 0.0214913
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.027
ELB improved by 0.0187865
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.011
ELB improved by 0.016335
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.997
ELB improved by 0.0141355
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.984
ELB improved by 0.0121918
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.974
ELB improved by 0.0105108
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.965
ELB improved by 0.00909402
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-872.747
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-574.045
ELB improved by 298.703
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-517.681
ELB improved by 56.3637
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-482.758
ELB improved by 34.923
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-465.873
ELB improved by 16.8852
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-458.592
ELB improved by 7.28106
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.206
ELB improved by 4.38534
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.361
ELB improved by 3.84539
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.554
ELB improved by 3.80697
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.797
ELB improved by 3.75687
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.342
ELB improved by 3.45499
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.481
ELB improved by 2.86119
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.333
ELB improved by 2.14775
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.801
ELB improved by 1.5324
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.695
ELB improved by 1.10568
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.852
ELB improved by 0.84331
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.162
ELB improved by 0.689869
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.561
ELB improved by 0.601101
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.011
ELB improved by 0.549665
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.491
ELB improved by 0.520152
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.987
ELB improved by 0.50398
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.491
ELB improved by 0.496156
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.997
ELB improved by 0.493532
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.503
ELB improved by 0.493989
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.007
ELB improved by 0.496174
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.508
ELB improved by 0.4995
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.004
ELB improved by 0.504203
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.492
ELB improved by 0.511314
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.97
ELB improved by 0.52266
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.428
ELB improved by 0.541131
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.857
ELB improved by 0.571702
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.233
ELB improved by 0.623961
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.516
ELB improved by 0.717003
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.635
ELB improved by 0.881279
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.524
ELB improved by 1.11042
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.29
ELB improved by 1.23444
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.173
ELB improved by 1.11674
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.273
ELB improved by 0.89952
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.568
ELB improved by 0.705632
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.013
ELB improved by 0.55494
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.575
ELB improved by 0.438134
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.223
ELB improved by 0.352009
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.926
ELB improved by 0.296644
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.662
ELB improved by 0.263781
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.423
ELB improved by 0.2396
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.21
ELB improved by 0.212518
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.031
ELB improved by 0.179286
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.886
ELB improved by 0.14469
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.772
ELB improved by 0.114656
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.68
ELB improved by 0.0914875
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.606
ELB improved by 0.0745022
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.543
ELB improved by 0.0621492
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.49
ELB improved by 0.0531
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.444
ELB improved by 0.0464457
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.402
ELB improved by 0.041596
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.364
ELB improved by 0.0381703
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.328
ELB improved by 0.0359381
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.293
ELB improved by 0.0347873
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.259
ELB improved by 0.0346989
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.223
ELB improved by 0.0357032
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.185
ELB improved by 0.0377869
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.144
ELB improved by 0.0407181
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.101
ELB improved by 0.0438096
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.055
ELB improved by 0.0458269
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.009
ELB improved by 0.0454042
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.967
ELB improved by 0.0419608
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.931
ELB improved by 0.036249
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.901
ELB improved by 0.0298001
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.877
ELB improved by 0.0239087
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.858
ELB improved by 0.019166
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.843
ELB improved by 0.0156067
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.83
ELB improved by 0.013017
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.819
ELB improved by 0.0111395
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.809
ELB improved by 0.00975762
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-861.876
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-562.269
ELB improved by 299.607
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-501.047
ELB improved by 61.2219
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-463.593
ELB improved by 37.4541
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.084
ELB improved by 13.5082
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.735
ELB improved by 5.34989
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.25
ELB improved by 3.48498
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.39
ELB improved by 2.85949
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.754
ELB improved by 2.63589
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.172
ELB improved by 2.58214
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.573
ELB improved by 2.59929
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.954
ELB improved by 2.61887
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.387
ELB improved by 2.56717
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.987
ELB improved by 2.39949
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.844
ELB improved by 2.14319
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.987
ELB improved by 1.85674
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.426
ELB improved by 1.56142
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.133
ELB improved by 1.29314
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.014
ELB improved by 1.11872
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.954
ELB improved by 1.06033
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.863
ELB improved by 1.09061
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.696
ELB improved by 1.16706
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.447
ELB improved by 1.24896
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.143
ELB improved by 1.30439
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.824
ELB improved by 1.3186
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.527
ELB improved by 1.29752
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.267
ELB improved by 1.25998
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.041
ELB improved by 1.22544
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.834
ELB improved by 1.20749
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.619
ELB improved by 1.21511
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.358
ELB improved by 1.2608
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.974
ELB improved by 1.38356
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.266
ELB improved by 1.70799
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.967
ELB improved by 2.29927
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.637
ELB improved by 2.33023
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.876
ELB improved by 1.76068
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.643
ELB improved by 1.23321
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.772
ELB improved by 0.87047
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.112
ELB improved by 0.660178
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.56
ELB improved by 0.552125
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.091
ELB improved by 0.469156
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.733
ELB improved by 0.357539
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.489
ELB improved by 0.244572
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.322
ELB improved by 0.166752
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.2
ELB improved by 0.122081
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.103
ELB improved by 0.0968473
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.021
ELB improved by 0.0819628
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.948
ELB improved by 0.0733862
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.878
ELB improved by 0.0700727
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.805
ELB improved by 0.0728311
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.721
ELB improved by 0.0833614
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.621
ELB improved by 0.100845
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.506
ELB improved by 0.114651
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.398
ELB improved by 0.107857
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.315
ELB improved by 0.0828041
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.257
ELB improved by 0.0584002
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.214
ELB improved by 0.0424413
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.182
ELB improved by 0.0325555
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.156
ELB improved by 0.0258389
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.135
ELB improved by 0.0209069
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.118
ELB improved by 0.0171954
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.104
ELB improved by 0.0144089
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.091
ELB improved by 0.0123272
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.08
ELB improved by 0.0107672
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.071
ELB improved by 0.00958244
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-898.933
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-599.914
ELB improved by 299.02
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-544.747
ELB improved by 55.1671
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-505.456
ELB improved by 39.2908
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-484.788
ELB improved by 20.6676
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-475.663
ELB improved by 9.12533
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-470.065
ELB improved by 5.59845
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-465.091
ELB improved by 4.97394
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-460.003
ELB improved by 5.08789
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.652
ELB improved by 5.35087
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.389
ELB improved by 5.26274
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.864
ELB improved by 4.52552
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.52
ELB improved by 3.34355
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.316
ELB improved by 2.2041
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.928
ELB improved by 1.38801
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.037
ELB improved by 0.890847
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.428
ELB improved by 0.609409
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.972
ELB improved by 0.455344
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.596
ELB improved by 0.376407
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.245
ELB improved by 0.350859
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.864
ELB improved by 0.380814
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.392
ELB improved by 0.472778
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.816
ELB improved by 0.57578
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.207
ELB improved by 0.608386
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.604
ELB improved by 0.603395
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.992
ELB improved by 0.612054
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.349
ELB improved by 0.642582
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.64
ELB improved by 0.709212
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.817
ELB improved by 0.822983
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.834
ELB improved by 0.983222
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.646
ELB improved by 1.18774
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.208
ELB improved by 1.43828
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.466
ELB improved by 1.74207
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.36
ELB improved by 2.10548
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.852
ELB improved by 2.50829
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.992
ELB improved by 2.86039
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.997
ELB improved by 2.99422
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.21
ELB improved by 2.78707
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.886
ELB improved by 2.32422
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.079
ELB improved by 1.80758
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.751
ELB improved by 1.32765
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.831
ELB improved by 0.919955
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.189
ELB improved by 0.641512
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.683
ELB improved by 0.506876
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.158
ELB improved by 0.524579
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.511
ELB improved by 0.646502
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.913
ELB improved by 0.598355
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.523
ELB improved by 0.390275
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.284
ELB improved by 0.238859
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.123
ELB improved by 0.160767
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.003
ELB improved by 0.1205
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.907
ELB improved by 0.0962236
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.828
ELB improved by 0.0785577
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.764
ELB improved by 0.0642452
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.711
ELB improved by 0.0524531
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.668
ELB improved by 0.0429795
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.633
ELB improved by 0.0355734
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.603
ELB improved by 0.0298527
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.577
ELB improved by 0.0254141
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.556
ELB improved by 0.0219196
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.536
ELB improved by 0.0191192
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.52
ELB improved by 0.0168386
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.505
ELB improved by 0.0149575
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.491
ELB improved by 0.013391
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.479
ELB improved by 0.0120771
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.468
ELB improved by 0.0109689
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.458
ELB improved by 0.0100301
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.449
ELB improved by 0.00923142
ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
>
> proc.time()
user system elapsed
4.734 0.479 5.918
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.087 | 0.049 | 0.213 | |
| getPIPs | 0.081 | 0.052 | 0.265 | |
| graper | 0.134 | 0.069 | 0.282 | |
| makeExampleData | 0.018 | 0.003 | 0.023 | |
| makeExampleDataWithUnequalGroups | 0.046 | 0.005 | 0.056 | |
| plotELBO | 0.421 | 0.047 | 0.553 | |
| plotGroupPenalties | 1.752 | 0.079 | 2.157 | |
| plotPosterior | 1.255 | 0.077 | 1.772 | |
| predict.graper | 3.173 | 0.252 | 4.202 | |
| print.graper | 0.076 | 0.035 | 0.132 | |