Multiple platform build/check report for BioC 3.20 - CHECK results for graper on kjohnson1

Hostname	OS	Arch (*)	R version	Installed pkgs
nebbiolo2	Linux (Ubuntu 22.04.3 LTS)	x86_64	4.4.0 RC (2024-04-16 r86468) -- "Puppy Cup"	4679
palomino4	Windows Server 2022 Datacenter	x64	4.4.0 RC (2024-04-16 r86468 ucrt) -- "Puppy Cup"	4414
merida1	macOS 12.7.4 Monterey	x86_64	4.4.0 Patched (2024-04-24 r86482) -- "Puppy Cup"	4441
kjohnson1	macOS 13.6.6 Ventura	arm64	4.4.0 Patched (2024-04-24 r86482) -- "Puppy Cup"	4394
Click on any hostname to see more info about the system (e.g. compilers) () as reported by 'uname -p', except on Windows and Mac OS X*

CHECK results for graper on kjohnson1

To the developers/maintainers of the graper package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Summary

Package: graper

Version: 1.21.0

Command: /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.21.0.tar.gz

StartedAt: 2024-06-10 21:29:13 -0400 (Mon, 10 Jun 2024)

EndedAt: 2024-06-10 21:30:24 -0400 (Mon, 10 Jun 2024)

EllapsedTime: 71.1 seconds

RetCode: 0

Status: WARNINGS

CheckDir: graper.Rcheck

Warnings: 1

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.21.0.tar.gz
###
##############################################################################
##############################################################################


* using log directory ‘/Users/biocbuild/bbs-3.20-bioc/meat/graper.Rcheck’
* using R version 4.4.0 Patched (2024-04-24 r86482)
* using platform: aarch64-apple-darwin20
* R was compiled by
    Apple clang version 14.0.0 (clang-1400.0.29.202)
    GNU Fortran (GCC) 12.2.0
* running under: macOS Ventura 13.6.6
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.21.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... WARNING
Found the following significant warnings:
  /Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/BH/include/boost/math/tools/config.hpp:23:6: warning: "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-W#warnings]
  #    warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)"
See ‘/Users/biocbuild/bbs-3.20-bioc/meat/graper.Rcheck/00install.out’ for details.
* used C++ compiler: ‘Apple clang version 15.0.0 (clang-1500.0.40.1)’
* used SDK: ‘MacOSX11.3.sdk’
* checking C++ specification ... NOTE
  Specified C++11: please drop specification unless essential
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘testthat.R’
 OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE

Status: 1 WARNING, 3 NOTEs
See
  ‘/Users/biocbuild/bbs-3.20-bioc/meat/graper.Rcheck/00check.log’
for details.

Installation output

graper.Rcheck/00install.out

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL graper
###
##############################################################################
##############################################################################


* installing to library ‘/Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library’
* installing *source* package ‘graper’ ...
** using staged installation
** libs
using C++ compiler: ‘Apple clang version 15.0.0 (clang-1500.0.40.1)’
using C++11
using SDK: ‘MacOSX11.3.sdk’
clang++ -arch arm64 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/BH/include' -I/opt/R/arm64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c RcppExports.cpp -o RcppExports.o
clang++ -arch arm64 -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/BH/include' -I/opt/R/arm64/include    -fPIC  -falign-functions=64 -Wall -g -O2   -c fit_graper.cpp -o fit_graper.o
In file included from fit_graper.cpp:4:
In file included from ./graper_linear_dense_ff.h:2:
In file included from /Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/BH/include/boost/math/special_functions/digamma.hpp:15:
In file included from /Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/BH/include/boost/math/special_functions/math_fwd.hpp:29:
In file included from /Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/BH/include/boost/math/special_functions/detail/round_fwd.hpp:11:
/Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/BH/include/boost/math/tools/config.hpp:23:6: warning: "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-W#warnings]
#    warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)"
     ^
1 warning generated.
clang++ -arch arm64 -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/arm64/lib -o graper.so RcppExports.o fit_graper.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/opt/gfortran/lib/gcc/aarch64-apple-darwin20.0/12.2.0 -L/opt/gfortran/lib -lgfortran -lemutls_w -lquadmath -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Library/Frameworks/R.framework/Versions/4.4-arm64/Resources/library/00LOCK-graper/00new/graper/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (graper)

Tests output

graper.Rcheck/tests/testthat.Rout


R version 4.4.0 Patched (2024-04-24 r86482) -- "Puppy Cup"
Copyright (C) 2024 The R Foundation for Statistical Computing
Platform: aarch64-apple-darwin20

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> library(testthat)
> library(graper)
> 
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-880.413
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-568.517
ELB improved by 311.897

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-510.168
ELB improved by 58.3481

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-476.711
ELB improved by 33.4571

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-462.694
ELB improved by 14.0174

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-456.438
ELB improved by 6.25584

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.814
ELB improved by 3.62446

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.079
ELB improved by 2.73462

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.705
ELB improved by 2.37399

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.535
ELB improved by 2.17043

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.513
ELB improved by 2.02121

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.612
ELB improved by 1.90153

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.808
ELB improved by 1.80384

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.093
ELB improved by 1.71529

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.479
ELB improved by 1.6134

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.004
ELB improved by 1.47513

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.713
ELB improved by 1.2912

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.64
ELB improved by 1.07283

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.794
ELB improved by 0.846269

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.154
ELB improved by 0.64002

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.681
ELB improved by 0.473122

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.33
ELB improved by 0.350639

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.063
ELB improved by 0.266727

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.852
ELB improved by 0.211099

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.678
ELB improved by 0.174084

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.53
ELB improved by 0.148618

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.399
ELB improved by 0.130193

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.283
ELB improved by 0.116123

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.178
ELB improved by 0.104855

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.083
ELB improved by 0.0954856

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.995
ELB improved by 0.0874789

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.915
ELB improved by 0.0805049

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.841
ELB improved by 0.0743524

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.772
ELB improved by 0.068881

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.708
ELB improved by 0.0639948

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.648
ELB improved by 0.0596268

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.592
ELB improved by 0.0557287

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.54
ELB improved by 0.0522646

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.491
ELB improved by 0.0492058

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.444
ELB improved by 0.0465278

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.4
ELB improved by 0.0442077

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.358
ELB improved by 0.0422235

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.317
ELB improved by 0.0405538

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.278
ELB improved by 0.0391776

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.24
ELB improved by 0.0380756

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.203
ELB improved by 0.0372303

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.166
ELB improved by 0.0366264

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.13
ELB improved by 0.0362512

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.094
ELB improved by 0.0360946

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.058
ELB improved by 0.036149

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.021
ELB improved by 0.0364091

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.985
ELB improved by 0.0368713

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.947
ELB improved by 0.0375338

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.909
ELB improved by 0.0383958

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.869
ELB improved by 0.039457

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.828
ELB improved by 0.0407176

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.786
ELB improved by 0.0421771

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.742
ELB improved by 0.0438344

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.697
ELB improved by 0.0456867

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.649
ELB improved by 0.0477294

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.599
ELB improved by 0.0499551

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.547
ELB improved by 0.0523534

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.492
ELB improved by 0.0549107

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.434
ELB improved by 0.0576103

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.374
ELB improved by 0.0604324

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.31
ELB improved by 0.0633553

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.244
ELB improved by 0.0663569

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.175
ELB improved by 0.0694161

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.102
ELB improved by 0.0725157

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.026
ELB improved by 0.0756447

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.948
ELB improved by 0.0788012

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.866
ELB improved by 0.081995

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.78
ELB improved by 0.0852497

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.692
ELB improved by 0.0886041

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.6
ELB improved by 0.0921134

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.504
ELB improved by 0.0958495

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.404
ELB improved by 0.099901

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.3
ELB improved by 0.104374

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.19
ELB improved by 0.109395

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.075
ELB improved by 0.115111

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.953
ELB improved by 0.121695

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.824
ELB improved by 0.129355

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.686
ELB improved by 0.138333

iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.537
ELB improved by 0.148898

iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.375
ELB improved by 0.161314

iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.2
ELB improved by 0.175733

iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.008
ELB improved by 0.191981

iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.799
ELB improved by 0.20923

iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.573
ELB improved by 0.225774

iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.333
ELB improved by 0.239323

iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.085
ELB improved by 0.248027

iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.834
ELB improved by 0.251474

iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.583
ELB improved by 0.250657

iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.336
ELB improved by 0.247121

iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.094
ELB improved by 0.242188

iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.857
ELB improved by 0.236593

iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.627
ELB improved by 0.230406

iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.404
ELB improved by 0.223174

iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.19
ELB improved by 0.214265

iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.986
ELB improved by 0.203303

iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.796
ELB improved by 0.190482

iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.619
ELB improved by 0.176602

iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.456
ELB improved by 0.16273

iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.307
ELB improved by 0.149665

iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.169
ELB improved by 0.13753

iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.043
ELB improved by 0.125826

iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.929
ELB improved by 0.11394

iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.828
ELB improved by 0.101688

iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.738
ELB improved by 0.0894069

iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.661
ELB improved by 0.0776077

iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.594
ELB improved by 0.0666494

iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.537
ELB improved by 0.0566887

iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.49
ELB improved by 0.0477809

iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.45
ELB improved by 0.0399525

iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.416
ELB improved by 0.0332091

iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.389
ELB improved by 0.0275163

iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.366
ELB improved by 0.0227938

iteration 118
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.347
ELB improved by 0.0189264

iteration 119
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.331
ELB improved by 0.0157847

iteration 120
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.318
ELB improved by 0.0132417

iteration 121
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.307
ELB improved by 0.0111841

iteration 122
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.297
ELB improved by 0.00951628

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-863.829
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-554.672
ELB improved by 309.157

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-497.304
ELB improved by 57.3677

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-462.425
ELB improved by 34.8795

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.778
ELB improved by 14.6473

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.932
ELB improved by 5.84571

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.509
ELB improved by 3.42337

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.864
ELB improved by 2.6442

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.525
ELB improved by 2.3392

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.306
ELB improved by 2.21877

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.131
ELB improved by 2.17535

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.962
ELB improved by 2.16913

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.775
ELB improved by 2.18733

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.548
ELB improved by 2.22624

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.266
ELB improved by 2.28252

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.916
ELB improved by 2.34938

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.506
ELB improved by 2.41073

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.094
ELB improved by 2.41214

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.86
ELB improved by 2.23395

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.043
ELB improved by 1.81642

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.745
ELB improved by 1.2979

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.882
ELB improved by 0.863472

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.305
ELB improved by 0.577084

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.898
ELB improved by 0.406581

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.594
ELB improved by 0.304543

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.353
ELB improved by 0.240483

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.154
ELB improved by 0.199136

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.981
ELB improved by 0.172643

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.825
ELB improved by 0.156032

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.679
ELB improved by 0.145842

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.54
ELB improved by 0.139775

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.403
ELB improved by 0.136407

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.268
ELB improved by 0.134894

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.134
ELB improved by 0.134741

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.998
ELB improved by 0.135662

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.86
ELB improved by 0.137501

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.72
ELB improved by 0.140198

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.576
ELB improved by 0.143769

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.428
ELB improved by 0.148318

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.274
ELB improved by 0.154052

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.113
ELB improved by 0.161326

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.942
ELB improved by 0.170722

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.759
ELB improved by 0.183193

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.559
ELB improved by 0.200302

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.334
ELB improved by 0.22456

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.074
ELB improved by 0.259608

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.765
ELB improved by 0.309133

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.393
ELB improved by 0.372712

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.951
ELB improved by 0.44149

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.446
ELB improved by 0.505243

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.882
ELB improved by 0.564072

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.259
ELB improved by 0.622347

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.58
ELB improved by 0.679293

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.85
ELB improved by 0.730155

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.08
ELB improved by 0.770126

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.283
ELB improved by 0.796681

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.474
ELB improved by 0.808899

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.672
ELB improved by 0.802079

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.909
ELB improved by 0.762999

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.23
ELB improved by 0.679504

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.671
ELB improved by 0.558785

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.245
ELB improved by 0.426103

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.938
ELB improved by 0.306343

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.726
ELB improved by 0.212275

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.581
ELB improved by 0.144886

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.482
ELB improved by 0.099086

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.414
ELB improved by 0.0686535

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.365
ELB improved by 0.0484935

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.33
ELB improved by 0.0350344

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.304
ELB improved by 0.0259342

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.284
ELB improved by 0.0196921

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.269
ELB improved by 0.0153466

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.257
ELB improved by 0.0122758

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.247
ELB improved by 0.0100717

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.238
ELB improved by 0.00846351

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-878.033
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-600.939
ELB improved by 277.094

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-539.206
ELB improved by 61.7321

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-493.392
ELB improved by 45.814

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-468.434
ELB improved by 24.959

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-456.604
ELB improved by 11.8293

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.239
ELB improved by 7.36527

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.611
ELB improved by 6.62815

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.753
ELB improved by 6.85774

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.788
ELB improved by 6.965

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.367
ELB improved by 6.42141

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.282
ELB improved by 5.08439

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.908
ELB improved by 3.37456

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.855
ELB improved by 2.05266

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.521
ELB improved by 1.33386

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.535
ELB improved by 0.985915

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.722
ELB improved by 0.813214

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.992
ELB improved by 0.729956

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.296
ELB improved by 0.696534

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.607
ELB improved by 0.688899

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.916
ELB improved by 0.691153

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.221
ELB improved by 0.694905

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.523
ELB improved by 0.697367

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.827
ELB improved by 0.696262

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.139
ELB improved by 0.688479

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.466
ELB improved by 0.672808

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.814
ELB improved by 0.651264

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.187
ELB improved by 0.627797

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.58
ELB improved by 0.606221

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.992
ELB improved by 0.588866

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.415
ELB improved by 0.576219

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.848
ELB improved by 0.567126

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.289
ELB improved by 0.559134

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.74
ELB improved by 0.548784

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.208
ELB improved by 0.532008

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.703
ELB improved by 0.504949

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.238
ELB improved by 0.465342

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.824
ELB improved by 0.413854

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.47
ELB improved by 0.354356

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.177
ELB improved by 0.292772

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.942
ELB improved by 0.235172

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.756
ELB improved by 0.186087

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.608
ELB improved by 0.147763

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.487
ELB improved by 0.120539

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.384
ELB improved by 0.103902

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.286
ELB improved by 0.0974633

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.185
ELB improved by 0.100867

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.074
ELB improved by 0.110913

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.958
ELB improved by 0.116581

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.853
ELB improved by 0.104575

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.775
ELB improved by 0.0786459

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.72
ELB improved by 0.0547944

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.68
ELB improved by 0.0396843

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.649
ELB improved by 0.0310547

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.623
ELB improved by 0.0257869

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.601
ELB improved by 0.0221652

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.582
ELB improved by 0.0194306

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.564
ELB improved by 0.0172469

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.549
ELB improved by 0.0154466

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.535
ELB improved by 0.013933

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.522
ELB improved by 0.0126425

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.511
ELB improved by 0.0115306

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.5
ELB improved by 0.010564

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.491
ELB improved by 0.00971745

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-878.94
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-565.051
ELB improved by 313.888

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-509.087
ELB improved by 55.9642

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-478.204
ELB improved by 30.8828

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-465.581
ELB improved by 12.6235

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-460.147
ELB improved by 5.43313

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-456.585
ELB improved by 3.56205

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-453.501
ELB improved by 3.08461

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.491
ELB improved by 3.0093

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.407
ELB improved by 3.08458

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.242
ELB improved by 3.16497

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.145
ELB improved by 3.09714

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.369
ELB improved by 2.77556

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.118
ELB improved by 2.25149

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.415
ELB improved by 1.70232

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.143
ELB improved by 1.27238

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.148
ELB improved by 0.995288

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.31
ELB improved by 0.837502

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.555
ELB improved by 0.755015

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.84
ELB improved by 0.715519

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.14
ELB improved by 0.699364

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.445
ELB improved by 0.695418

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.747
ELB improved by 0.69759

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.045
ELB improved by 0.702801

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.335
ELB improved by 0.710006

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.615
ELB improved by 0.719842

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.88
ELB improved by 0.734613

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.121
ELB improved by 0.758701

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.321
ELB improved by 0.800215

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.447
ELB improved by 0.874598

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.444
ELB improved by 1.00256

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.282
ELB improved by 1.16157

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.061
ELB improved by 1.22166

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.938
ELB improved by 1.12284

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.989
ELB improved by 0.949308

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.223
ELB improved by 0.765196

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.622
ELB improved by 0.601207

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.151
ELB improved by 0.470914

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.778
ELB improved by 0.373366

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.479
ELB improved by 0.298979

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.241
ELB improved by 0.238369

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.053
ELB improved by 0.188082

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.904
ELB improved by 0.148745

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.783
ELB improved by 0.120426

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.682
ELB improved by 0.101337

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.593
ELB improved by 0.0889218

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.512
ELB improved by 0.0808149

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.437
ELB improved by 0.0750995

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.367
ELB improved by 0.0702031

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.302
ELB improved by 0.0648583

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.244
ELB improved by 0.0583327

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.193
ELB improved by 0.0507123

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.15
ELB improved by 0.0427878

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.115
ELB improved by 0.0354969

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.085
ELB improved by 0.0294117

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.061
ELB improved by 0.0246347

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.04
ELB improved by 0.0209809

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.022
ELB improved by 0.0181825

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.006
ELB improved by 0.0160001

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.991
ELB improved by 0.0142547

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.978
ELB improved by 0.0128226

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.967
ELB improved by 0.0116211

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.956
ELB improved by 0.010595

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.947
ELB improved by 0.00970664

ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
> 
> proc.time()
   user  system elapsed 
  2.755   0.218   2.971

Example timings

graper.Rcheck/graper-Ex.timings

name	user	system	elapsed
coef.graper	0.089	0.016	0.106
getPIPs	0.083	0.013	0.096
graper	0.136	0.019	0.159
makeExampleData	0.014	0.001	0.014
makeExampleDataWithUnequalGroups	0.038	0.002	0.040
plotELBO	0.268	0.017	0.286
plotGroupPenalties	0.756	0.023	0.783
plotPosterior	0.609	0.017	0.629
predict.graper	3.053	0.080	3.147
print.graper	0.082	0.011	0.093