Britta Velten
| Snapshot Date: 2024-07-05 14:00 -0400 (Fri, 05 Jul 2024) |
| git_url: https://git.bioconductor.org/packages/graper |
| git_branch: devel |
| git_last_commit: 7b45fcc |
| git_last_commit_date: 2024-04-30 11:11:42 -0400 (Tue, 30 Apr 2024) |
| Back to Multiple platform build/check report for BioC 3.20: simplified long |
|
This page was generated on 2024-07-06 11:44 -0400 (Sat, 06 Jul 2024).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 22.04.3 LTS) | x86_64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4643 |
| palomino6 | Windows Server 2022 Datacenter | x64 | 4.4.1 (2024-06-14 ucrt) -- "Race for Your Life" | 4414 |
| lconway | macOS 12.7.1 Monterey | x86_64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4442 |
| kjohnson3 | macOS 13.6.5 Ventura | arm64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 4391 |
| kunpeng2 | Linux (openEuler 22.03 LTS-SP1) | aarch64 | 4.4.1 (2024-06-14) -- "Race for Your Life" | 3833 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 883/2243 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graper 1.21.0 (landing page) Britta Velten
| nebbiolo2 | Linux (Ubuntu 22.04.3 LTS) / x86_64 | OK | OK | OK | | ||||||||
| palomino6 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | |||||||||
| lconway | macOS 12.7.1 Monterey / x86_64 | OK | OK | WARNINGS | OK | | ||||||||
| kjohnson3 | macOS 13.6.5 Ventura / arm64 | OK | OK | WARNINGS | OK | | ||||||||
| kunpeng2 | Linux (openEuler 22.03 LTS-SP1) / aarch64 | OK | OK | OK | ||||||||||
|
To the developers/maintainers of the graper package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. - See Martin Grigorov's blog post for how to debug Linux ARM64 related issues on a x86_64 host. |
| Package: graper |
| Version: 1.21.0 |
| Command: /home/biocbuild/R/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/R/R/site-library --no-vignettes --timings graper_1.21.0.tar.gz |
| StartedAt: 2024-07-06 05:26:09 -0000 (Sat, 06 Jul 2024) |
| EndedAt: 2024-07-06 05:27:13 -0000 (Sat, 06 Jul 2024) |
| EllapsedTime: 64.2 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: graper.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/R/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/R/R/site-library --no-vignettes --timings graper_1.21.0.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/home/biocbuild/bbs-3.20-bioc/meat/graper.Rcheck’
* using R version 4.4.1 (2024-06-14)
* using platform: aarch64-unknown-linux-gnu
* R was compiled by
gcc (GCC) 12.2.1 20220819 (openEuler 12.2.1-14)
GNU Fortran (GCC) 10.3.1
* running under: openEuler 22.03 (LTS-SP1)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.21.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘g++ (GCC) 10.3.1’
* checking C++ specification ... NOTE
Specified C++11: please drop specification unless essential
* checking installed package size ... NOTE
installed size is 7.7Mb
sub-directories of 1Mb or more:
libs 7.5Mb
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE
Status: 4 NOTEs
See
‘/home/biocbuild/bbs-3.20-bioc/meat/graper.Rcheck/00check.log’
for details.
graper.Rcheck/00install.out
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/R/R/bin/R CMD INSTALL graper
###
##############################################################################
##############################################################################
* installing to library ‘/home/biocbuild/R/R-4.4.1/site-library’
* installing *source* package ‘graper’ ...
** using staged installation
** libs
using C++ compiler: ‘g++ (GCC) 10.3.1’
using C++11
g++ -std=gnu++11 -I"/home/biocbuild/R/R-4.4.1/include" -DNDEBUG -I'/home/biocbuild/R/R-4.4.1/site-library/Rcpp/include' -I'/home/biocbuild/R/R-4.4.1/site-library/RcppArmadillo/include' -I'/home/biocbuild/R/R-4.4.1/site-library/BH/include' -I/usr/local/include -fPIC -g -O2 -Wall -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++11 -I"/home/biocbuild/R/R-4.4.1/include" -DNDEBUG -I'/home/biocbuild/R/R-4.4.1/site-library/Rcpp/include' -I'/home/biocbuild/R/R-4.4.1/site-library/RcppArmadillo/include' -I'/home/biocbuild/R/R-4.4.1/site-library/BH/include' -I/usr/local/include -fPIC -g -O2 -Wall -c fit_graper.cpp -o fit_graper.o
In file included from /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/math/special_functions/detail/round_fwd.hpp:11,
from /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/math/special_functions/math_fwd.hpp:29,
from /home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/math/special_functions/digamma.hpp:15,
from graper_linear_dense_ff.h:2,
from fit_graper.cpp:4:
/home/biocbuild/R/R-4.4.1/site-library/BH/include/boost/math/tools/config.hpp:23:6: warning: #warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)" [-Wcpp]
23 | # warning "The minimum language standard to use Boost.Math will be C++14 starting in July 2023 (Boost 1.82 release)"
| ^~~~~~~
g++ -std=gnu++11 -shared -L/home/biocbuild/R/R-4.4.1/lib -L/usr/local/lib -o graper.so RcppExports.o fit_graper.o -lopenblas -L/usr/lib/gcc/aarch64-linux-gnu/10.3.1 -lgfortran -lm -L/home/biocbuild/R/R-4.4.1/lib -lR
installing to /home/biocbuild/R/R-4.4.1/site-library/00LOCK-graper/00new/graper/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (graper)
graper.Rcheck/tests/testthat.Rout
R version 4.4.1 (2024-06-14) -- "Race for Your Life"
Copyright (C) 2024 The R Foundation for Statistical Computing
Platform: aarch64-unknown-linux-gnu
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-884.676
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-567.675
ELB improved by 317
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-503.071
ELB improved by 64.6045
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-467.453
ELB improved by 35.6175
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-453.349
ELB improved by 14.1036
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.25
ELB improved by 6.09941
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.452
ELB improved by 3.79776
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.471
ELB improved by 2.98164
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.817
ELB improved by 2.65358
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.296
ELB improved by 2.52074
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.847
ELB improved by 2.44905
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.465
ELB improved by 2.38268
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.16
ELB improved by 2.30455
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.956
ELB improved by 2.20442
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.901
ELB improved by 2.05451
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.074
ELB improved by 1.82746
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.524
ELB improved by 1.5497
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.228
ELB improved by 1.29614
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.11
ELB improved by 1.11826
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.12
ELB improved by 0.989615
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.278
ELB improved by 0.841627
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.615
ELB improved by 0.663288
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.116
ELB improved by 0.499453
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.737
ELB improved by 0.378156
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.44
ELB improved by 0.297533
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.194
ELB improved by 0.24578
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.982
ELB improved by 0.21237
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.791
ELB improved by 0.190284
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.616
ELB improved by 0.175325
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.451
ELB improved by 0.165076
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.293
ELB improved by 0.158148
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.139
ELB improved by 0.153725
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.988
ELB improved by 0.151313
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.837
ELB improved by 0.150613
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.686
ELB improved by 0.151444
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.532
ELB improved by 0.153718
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.375
ELB improved by 0.157419
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.212
ELB improved by 0.162608
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.043
ELB improved by 0.169425
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.865
ELB improved by 0.178104
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.676
ELB improved by 0.188988
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.473
ELB improved by 0.202547
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.254
ELB improved by 0.219393
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.013
ELB improved by 0.240276
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.747
ELB improved by 0.266057
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.45
ELB improved by 0.297639
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.114
ELB improved by 0.335832
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.733
ELB improved by 0.381145
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.299
ELB improved by 0.433455
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.808
ELB improved by 0.4915
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.256
ELB improved by 0.552173
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.646
ELB improved by 0.609976
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.988
ELB improved by 0.657536
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.3
ELB improved by 0.687896
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.602
ELB improved by 0.698451
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.905
ELB improved by 0.696741
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.195
ELB improved by 0.71004
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.402
ELB improved by 0.792731
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.435
ELB improved by 0.966972
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.364
ELB improved by 1.07074
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.409
ELB improved by 0.95588
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.681
ELB improved by 0.72787
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.189
ELB improved by 0.491735
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.884
ELB improved by 0.305264
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.698
ELB improved by 0.185766
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.582
ELB improved by 0.116313
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.505
ELB improved by 0.0766861
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.451
ELB improved by 0.0535544
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.412
ELB improved by 0.0394715
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.381
ELB improved by 0.0304705
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.357
ELB improved by 0.0244341
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.337
ELB improved by 0.020203
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.32
ELB improved by 0.0171183
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.305
ELB improved by 0.014791
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.292
ELB improved by 0.0129823
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.28
ELB improved by 0.0115404
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.27
ELB improved by 0.0103657
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.261
ELB improved by 0.00939134
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-837.122
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-586.137
ELB improved by 250.985
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-528.797
ELB improved by 57.3397
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-483.344
ELB improved by 45.4527
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-457.086
ELB improved by 26.2581
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.034
ELB improved by 11.0518
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.606
ELB improved by 5.42828
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.714
ELB improved by 3.89181
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.065
ELB improved by 3.64915
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.08
ELB improved by 3.98525
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.486
ELB improved by 4.594
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.328
ELB improved by 5.15815
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.087
ELB improved by 5.24117
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.475
ELB improved by 4.61125
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.922
ELB improved by 3.55309
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.452
ELB improved by 2.4705
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.87
ELB improved by 1.58164
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.885
ELB improved by 0.984607
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.255
ELB improved by 0.630413
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.828
ELB improved by 0.427426
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.518
ELB improved by 0.309946
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.278
ELB improved by 0.239351
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.084
ELB improved by 0.194558
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.919
ELB improved by 0.164464
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.776
ELB improved by 0.143216
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.648
ELB improved by 0.127624
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.533
ELB improved by 0.115863
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.426
ELB improved by 0.106827
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.326
ELB improved by 0.0998106
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.232
ELB improved by 0.0943412
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.142
ELB improved by 0.0900927
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.055
ELB improved by 0.0868338
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.97
ELB improved by 0.0843976
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.888
ELB improved by 0.0826628
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.806
ELB improved by 0.0815407
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.725
ELB improved by 0.0809663
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.644
ELB improved by 0.0808912
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.563
ELB improved by 0.0812776
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.481
ELB improved by 0.082094
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.398
ELB improved by 0.0833114
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.313
ELB improved by 0.084902
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.226
ELB improved by 0.0868404
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.137
ELB improved by 0.0891072
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.045
ELB improved by 0.0916948
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.95
ELB improved by 0.0946141
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.852
ELB improved by 0.0978993
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.751
ELB improved by 0.10161
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.645
ELB improved by 0.10583
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.534
ELB improved by 0.110666
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.418
ELB improved by 0.116239
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.295
ELB improved by 0.122688
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.165
ELB improved by 0.130153
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.027
ELB improved by 0.138777
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.878
ELB improved by 0.148694
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.718
ELB improved by 0.160021
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.545
ELB improved by 0.172854
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.358
ELB improved by 0.187279
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.154
ELB improved by 0.203404
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.933
ELB improved by 0.22143
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.691
ELB improved by 0.241764
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.426
ELB improved by 0.265099
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.134
ELB improved by 0.292237
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.811
ELB improved by 0.323163
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.455
ELB improved by 0.355106
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.074
ELB improved by 0.381064
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.682
ELB improved by 0.392272
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.298
ELB improved by 0.384272
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.938
ELB improved by 0.35982
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.612
ELB improved by 0.325634
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.325
ELB improved by 0.287809
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.074
ELB improved by 0.250198
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.859
ELB improved by 0.215647
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.671
ELB improved by 0.187717
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.499
ELB improved by 0.171874
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.32
ELB improved by 0.178719
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.084
ELB improved by 0.236056
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.671
ELB improved by 0.412951
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.957
ELB improved by 0.714832
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.234
ELB improved by 0.722157
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.816
ELB improved by 0.418636
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.601
ELB improved by 0.214955
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.479
ELB improved by 0.121741
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.396
ELB improved by 0.0827688
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.324
ELB improved by 0.0726406
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.241
ELB improved by 0.0824924
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.132
ELB improved by 0.109095
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.989
ELB improved by 0.14289
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.829
ELB improved by 0.159906
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.687
ELB improved by 0.141931
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.584
ELB improved by 0.103044
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.516
ELB improved by 0.0679291
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.471
ELB improved by 0.0450076
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.44
ELB improved by 0.0314477
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.417
ELB improved by 0.0231728
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.399
ELB improved by 0.0177094
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.385
ELB improved by 0.0138635
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.374
ELB improved by 0.0110718
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.365
ELB improved by 0.00902634
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-859.683
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-560.474
ELB improved by 299.209
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-504.352
ELB improved by 56.1215
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-474.705
ELB improved by 29.6472
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-462.109
ELB improved by 12.5962
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-455.761
ELB improved by 6.34782
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.953
ELB improved by 4.80788
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.228
ELB improved by 4.72564
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.307
ELB improved by 4.92039
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.439
ELB improved by 4.86884
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.149
ELB improved by 4.28908
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.92
ELB improved by 3.22979
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.768
ELB improved by 2.15148
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.316
ELB improved by 1.45263
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.202
ELB improved by 1.11334
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.29
ELB improved by 0.911767
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.59
ELB improved by 0.700601
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.08
ELB improved by 0.510028
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.699
ELB improved by 0.380431
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.4
ELB improved by 0.29903
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.154
ELB improved by 0.246069
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.945
ELB improved by 0.209368
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.763
ELB improved by 0.182332
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.601
ELB improved by 0.161416
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.457
ELB improved by 0.144648
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.326
ELB improved by 0.13085
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.206
ELB improved by 0.119271
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.097
ELB improved by 0.109395
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.996
ELB improved by 0.100853
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.903
ELB improved by 0.0933719
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.816
ELB improved by 0.0867441
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.735
ELB improved by 0.0808093
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.66
ELB improved by 0.075443
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.589
ELB improved by 0.0705476
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.523
ELB improved by 0.0660468
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.461
ELB improved by 0.0618811
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.403
ELB improved by 0.0580042
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.349
ELB improved by 0.0543802
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.298
ELB improved by 0.0509815
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.25
ELB improved by 0.0477871
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.205
ELB improved by 0.0447806
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.163
ELB improved by 0.0419496
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.124
ELB improved by 0.0392839
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.087
ELB improved by 0.0367755
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.053
ELB improved by 0.0344173
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.021
ELB improved by 0.032203
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.991
ELB improved by 0.0301266
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.962
ELB improved by 0.0281823
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.936
ELB improved by 0.0263642
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.911
ELB improved by 0.0246662
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.888
ELB improved by 0.0230826
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.867
ELB improved by 0.021607
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.846
ELB improved by 0.0202333
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.828
ELB improved by 0.0189556
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.81
ELB improved by 0.0177677
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.793
ELB improved by 0.0166638
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.777
ELB improved by 0.0156382
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.763
ELB improved by 0.0146854
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.749
ELB improved by 0.0138003
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.736
ELB improved by 0.0129778
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.724
ELB improved by 0.0122135
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.712
ELB improved by 0.0115029
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.701
ELB improved by 0.0108419
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.691
ELB improved by 0.0102269
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.682
ELB improved by 0.00965433
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-854.543
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-565.49
ELB improved by 289.053
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-505.882
ELB improved by 59.6078
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-470.692
ELB improved by 35.1904
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-455.278
ELB improved by 15.4135
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.893
ELB improved by 7.38564
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.71
ELB improved by 5.18254
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.081
ELB improved by 4.62927
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.39
ELB improved by 4.69093
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.498
ELB improved by 4.89173
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.685
ELB improved by 4.81358
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.528
ELB improved by 4.1566
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.492
ELB improved by 3.03614
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.572
ELB improved by 1.92047
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.428
ELB improved by 1.14348
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.718
ELB improved by 0.709855
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.23
ELB improved by 0.488169
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.858
ELB improved by 0.371795
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.554
ELB improved by 0.304375
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.293
ELB improved by 0.26061
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.064
ELB improved by 0.229564
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.858
ELB improved by 0.205591
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.673
ELB improved by 0.184651
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.509
ELB improved by 0.164155
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.365
ELB improved by 0.143894
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.24
ELB improved by 0.125466
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.13
ELB improved by 0.110344
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.031
ELB improved by 0.0988105
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.94
ELB improved by 0.0903214
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.856
ELB improved by 0.0841884
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.776
ELB improved by 0.0799118
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.699
ELB improved by 0.0772287
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.623
ELB improved by 0.0760715
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.547
ELB improved by 0.07653
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.468
ELB improved by 0.0788446
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.384
ELB improved by 0.0834408
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.293
ELB improved by 0.0910501
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.19
ELB improved by 0.103027
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.068
ELB improved by 0.122053
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.915
ELB improved by 0.153207
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.711
ELB improved by 0.203413
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.441
ELB improved by 0.270954
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.12
ELB improved by 0.320806
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.816
ELB improved by 0.303411
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.578
ELB improved by 0.23848
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.394
ELB improved by 0.184309
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.236
ELB improved by 0.157708
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.087
ELB improved by 0.148806
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.939
ELB improved by 0.147776
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.79
ELB improved by 0.14952
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.638
ELB improved by 0.151777
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.484
ELB improved by 0.153519
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.33
ELB improved by 0.15422
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.177
ELB improved by 0.15359
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.025
ELB improved by 0.151492
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.877
ELB improved by 0.147925
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.734
ELB improved by 0.143005
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.597
ELB improved by 0.136945
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.467
ELB improved by 0.13002
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.345
ELB improved by 0.122531
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.23
ELB improved by 0.114767
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.123
ELB improved by 0.106979
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.024
ELB improved by 0.0993648
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.931
ELB improved by 0.0920692
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.846
ELB improved by 0.0851834
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.768
ELB improved by 0.0787556
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.695
ELB improved by 0.072801
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.627
ELB improved by 0.0673116
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.565
ELB improved by 0.0622645
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.508
ELB improved by 0.0576287
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.454
ELB improved by 0.0533699
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.405
ELB improved by 0.0494536
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.359
ELB improved by 0.045847
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.316
ELB improved by 0.0425205
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.277
ELB improved by 0.0394476
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.24
ELB improved by 0.0366053
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.206
ELB improved by 0.0339735
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.175
ELB improved by 0.0315351
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.146
ELB improved by 0.0292749
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.118
ELB improved by 0.0271796
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.093
ELB improved by 0.0252376
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.07
ELB improved by 0.0234383
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.048
ELB improved by 0.021772
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.028
ELB improved by 0.0202297
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.009
ELB improved by 0.0188032
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.991
ELB improved by 0.0174845
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.975
ELB improved by 0.0162664
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.96
ELB improved by 0.0151419
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.946
ELB improved by 0.0141042
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.933
ELB improved by 0.0131472
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.92
ELB improved by 0.012265
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.909
ELB improved by 0.0114519
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.898
ELB improved by 0.0107027
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.888
ELB improved by 0.0100125
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.879
ELB improved by 0.00937664
ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
>
> proc.time()
user system elapsed
2.690 0.127 2.807
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.054 | 0.001 | 0.055 | |
| getPIPs | 0.05 | 0.00 | 0.05 | |
| graper | 0.069 | 0.008 | 0.077 | |
| makeExampleData | 0.009 | 0.000 | 0.009 | |
| makeExampleDataWithUnequalGroups | 0.010 | 0.000 | 0.009 | |
| plotELBO | 0.265 | 0.004 | 0.280 | |
| plotGroupPenalties | 1.085 | 0.004 | 1.092 | |
| plotPosterior | 0.720 | 0.000 | 0.722 | |
| predict.graper | 0.980 | 0.024 | 1.006 | |
| print.graper | 0.045 | 0.004 | 0.049 | |