Britta Velten
| Snapshot Date: 2026-03-10 13:40 -0400 (Tue, 10 Mar 2026) |
| git_url: https://git.bioconductor.org/packages/graper |
| git_branch: devel |
| git_last_commit: 95474d7 |
| git_last_commit_date: 2025-10-29 10:49:21 -0400 (Wed, 29 Oct 2025) |
| Back to Multiple platform build/check report for BioC 3.23: simplified long |
|
This page was generated on 2026-03-11 11:33 -0400 (Wed, 11 Mar 2026).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) | x86_64 | R Under development (unstable) (2026-03-05 r89546) -- "Unsuffered Consequences" | 4719 |
| kjohnson3 | macOS 13.7.7 Ventura | arm64 | R Under development (unstable) (2026-03-01 r89506) -- "Unsuffered Consequences" | 2847 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 928/2360 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graper 1.27.0 (landing page) Britta Velten
| nebbiolo1 | Linux (Ubuntu 24.04.3 LTS) / x86_64 | OK | OK | OK | | ||||||||
| kjohnson3 | macOS 13.7.7 Ventura / arm64 | OK | OK | OK | ERROR | |||||||||
| See other builds for graper in R Universe. | ||||||||||||||
|
To the developers/maintainers of the graper package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: graper |
| Version: 1.27.0 |
| Command: /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.23-bioc/R/site-library --timings graper_1.27.0.tar.gz |
| StartedAt: 2026-03-10 23:49:49 -0400 (Tue, 10 Mar 2026) |
| EndedAt: 2026-03-10 23:51:20 -0400 (Tue, 10 Mar 2026) |
| EllapsedTime: 91.1 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: graper.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.23-bioc/R/site-library --timings graper_1.27.0.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/home/biocbuild/bbs-3.23-bioc/meat/graper.Rcheck’
* using R Under development (unstable) (2026-03-05 r89546)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
gcc (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
GNU Fortran (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0
* running under: Ubuntu 24.04.4 LTS
* using session charset: UTF-8
* current time: 2026-03-11 03:49:49 UTC
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.27.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0’
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... INFO
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* DONE
Status: 1 NOTE
See
‘/home/biocbuild/bbs-3.23-bioc/meat/graper.Rcheck/00check.log’
for details.
graper.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD INSTALL graper ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.23-bioc/R/site-library’ * installing *source* package ‘graper’ ... ** this is package ‘graper’ version ‘1.27.0’ ** using staged installation ** libs using C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0’ g++ -std=gnu++20 -I"/home/biocbuild/bbs-3.23-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -Werror=format-security -c RcppExports.cpp -o RcppExports.o g++ -std=gnu++20 -I"/home/biocbuild/bbs-3.23-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/BH/include' -I/usr/local/include -fpic -g -O2 -Wall -Werror=format-security -c fit_graper.cpp -o fit_graper.o g++ -std=gnu++20 -shared -L/home/biocbuild/bbs-3.23-bioc/R/lib -L/usr/local/lib -o graper.so RcppExports.o fit_graper.o -llapack -L/home/biocbuild/bbs-3.23-bioc/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/biocbuild/bbs-3.23-bioc/R/lib -lR installing to /home/biocbuild/bbs-3.23-bioc/R/site-library/00LOCK-graper/00new/graper/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (graper)
graper.Rcheck/tests/testthat.Rout
R Under development (unstable) (2026-03-05 r89546) -- "Unsuffered Consequences"
Copyright (C) 2026 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-872.458
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-598.346
ELB improved by 274.112
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-542.08
ELB improved by 56.2658
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-498.631
ELB improved by 43.4493
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-475.075
ELB improved by 23.5557
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-465.403
ELB improved by 9.67272
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-460.447
ELB improved by 4.95523
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-456.59
ELB improved by 3.85753
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-453.034
ELB improved by 3.55587
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.475
ELB improved by 3.55845
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.761
ELB improved by 3.71489
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.87
ELB improved by 3.89089
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.971
ELB improved by 3.89854
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.444
ELB improved by 3.52717
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.764
ELB improved by 2.67967
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.057
ELB improved by 1.70711
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.03
ELB improved by 1.02703
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.372
ELB improved by 0.658468
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.904
ELB improved by 0.467516
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.542
ELB improved by 0.362408
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.242
ELB improved by 0.300265
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.98
ELB improved by 0.261167
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.745
ELB improved by 0.235159
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.528
ELB improved by 0.21722
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.323
ELB improved by 0.205019
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.125
ELB improved by 0.197935
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.928
ELB improved by 0.196867
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.724
ELB improved by 0.204583
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.498
ELB improved by 0.225715
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.235
ELB improved by 0.262652
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.933
ELB improved by 0.302514
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.618
ELB improved by 0.314421
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.329
ELB improved by 0.288991
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.076
ELB improved by 0.253533
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.847
ELB improved by 0.228554
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.633
ELB improved by 0.21461
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.426
ELB improved by 0.207003
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.223
ELB improved by 0.202689
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.022
ELB improved by 0.200419
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.823
ELB improved by 0.199864
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.622
ELB improved by 0.201095
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.417
ELB improved by 0.204353
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.207
ELB improved by 0.209974
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.989
ELB improved by 0.218383
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.759
ELB improved by 0.230125
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.513
ELB improved by 0.245932
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.246
ELB improved by 0.266804
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.952
ELB improved by 0.294065
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.623
ELB improved by 0.329253
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.249
ELB improved by 0.373406
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.824
ELB improved by 0.425082
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.347
ELB improved by 0.47741
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.829
ELB improved by 0.517771
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.295
ELB improved by 0.533491
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.777
ELB improved by 0.518691
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.3
ELB improved by 0.47652
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.883
ELB improved by 0.417583
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.527
ELB improved by 0.355485
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.225
ELB improved by 0.301868
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.96
ELB improved by 0.265002
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.707
ELB improved by 0.253035
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.427
ELB improved by 0.280526
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.056
ELB improved by 0.370743
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.535
ELB improved by 0.521489
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.859
ELB improved by 0.675042
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.963
ELB improved by 0.896551
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.732
ELB improved by 1.23102
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.514
ELB improved by 1.21791
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.692
ELB improved by 0.822464
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.207
ELB improved by 0.484882
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.886
ELB improved by 0.320423
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.612
ELB improved by 0.274084
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.331
ELB improved by 0.281228
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.066
ELB improved by 0.264637
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.867
ELB improved by 0.199196
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.733
ELB improved by 0.134226
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.639
ELB improved by 0.0941468
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.567
ELB improved by 0.0716122
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.509
ELB improved by 0.0578262
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.461
ELB improved by 0.048472
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.419
ELB improved by 0.0416729
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.383
ELB improved by 0.0364727
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.35
ELB improved by 0.0322857
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.322
ELB improved by 0.0287474
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.296
ELB improved by 0.0256583
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.273
ELB improved by 0.0229316
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.253
ELB improved by 0.0205393
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.234
ELB improved by 0.0184707
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.217
ELB improved by 0.0167107
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.202
ELB improved by 0.0152336
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.188
ELB improved by 0.0140057
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.175
ELB improved by 0.0129902
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.163
ELB improved by 0.0121513
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.151
ELB improved by 0.011456
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.141
ELB improved by 0.0108746
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.13
ELB improved by 0.0103805
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.12
ELB improved by 0.00994946
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-872.388
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-555.334
ELB improved by 317.054
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-498.711
ELB improved by 56.6227
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-466.822
ELB improved by 31.8894
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-453.616
ELB improved by 13.2064
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.854
ELB improved by 5.76115
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.204
ELB improved by 3.65048
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-441.161
ELB improved by 3.04315
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.368
ELB improved by 2.7928
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.697
ELB improved by 2.67069
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.093
ELB improved by 2.60387
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.544
ELB improved by 2.54958
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.084
ELB improved by 2.45965
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.802
ELB improved by 2.28194
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.808
ELB improved by 1.99403
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.174
ELB improved by 1.63439
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.891
ELB improved by 1.28257
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.886
ELB improved by 1.00485
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.063
ELB improved by 0.823835
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.338
ELB improved by 0.724837
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.659
ELB improved by 0.678735
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.996
ELB improved by 0.662927
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.332
ELB improved by 0.664252
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.661
ELB improved by 0.670945
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.986
ELB improved by 0.674992
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.31
ELB improved by 0.676126
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.631
ELB improved by 0.678313
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.945
ELB improved by 0.686264
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.241
ELB improved by 0.70441
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.504
ELB improved by 0.736279
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.721
ELB improved by 0.783553
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.876
ELB improved by 0.844761
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.963
ELB improved by 0.913635
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.985
ELB improved by 0.977904
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.964
ELB improved by 1.02037
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.94
ELB improved by 1.02421
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.958
ELB improved by 0.98181
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.056
ELB improved by 0.902407
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.242
ELB improved by 0.814
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.482
ELB improved by 0.759349
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.715
ELB improved by 0.767565
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.969
ELB improved by 0.746219
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.393
ELB improved by 0.575187
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.014
ELB improved by 0.379884
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.762
ELB improved by 0.251243
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.586
ELB improved by 0.176023
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.455
ELB improved by 0.131078
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.353
ELB improved by 0.102551
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.269
ELB improved by 0.0832483
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.2
ELB improved by 0.0694346
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.141
ELB improved by 0.05908
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.09
ELB improved by 0.051025
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.045
ELB improved by 0.0445748
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.006
ELB improved by 0.0392937
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.971
ELB improved by 0.0348959
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.94
ELB improved by 0.0311869
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.912
ELB improved by 0.0280293
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.887
ELB improved by 0.025323
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.864
ELB improved by 0.0229933
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.843
ELB improved by 0.0209828
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.823
ELB improved by 0.0192468
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.806
ELB improved by 0.0177495
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.789
ELB improved by 0.0164622
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.774
ELB improved by 0.0153614
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.759
ELB improved by 0.0144274
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.746
ELB improved by 0.013644
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.733
ELB improved by 0.0129969
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.72
ELB improved by 0.0124736
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.708
ELB improved by 0.0120619
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.696
ELB improved by 0.0117499
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.685
ELB improved by 0.0115245
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.674
ELB improved by 0.0113715
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.662
ELB improved by 0.0112748
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.651
ELB improved by 0.0112166
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.64
ELB improved by 0.0111787
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.629
ELB improved by 0.0111434
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.618
ELB improved by 0.0110957
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.607
ELB improved by 0.011025
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.596
ELB improved by 0.0109268
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.585
ELB improved by 0.0108028
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.574
ELB improved by 0.0106605
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.564
ELB improved by 0.0105116
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.553
ELB improved by 0.0103705
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.543
ELB improved by 0.0102524
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.533
ELB improved by 0.0101727
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.523
ELB improved by 0.0101464
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.513
ELB improved by 0.0101882
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.502
ELB improved by 0.0103132
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.492
ELB improved by 0.0105376
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.481
ELB improved by 0.0108789
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.47
ELB improved by 0.0113559
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.458
ELB improved by 0.0119876
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.445
ELB improved by 0.0127902
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.431
ELB improved by 0.0137708
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.416
ELB improved by 0.0149166
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.4
ELB improved by 0.0161796
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.382
ELB improved by 0.0174577
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.364
ELB improved by 0.0185817
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.345
ELB improved by 0.0193229
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.325
ELB improved by 0.0194393
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.306
ELB improved by 0.0187606
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.289
ELB improved by 0.0172778
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.274
ELB improved by 0.0151773
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.261
ELB improved by 0.0127802
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.251
ELB improved by 0.0104218
iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.242
ELB improved by 0.00834495
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-856.726
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-569.201
ELB improved by 287.525
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-506.821
ELB improved by 62.3793
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-465.562
ELB improved by 41.2588
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.857
ELB improved by 17.7051
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.576
ELB improved by 7.28149
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-436.38
ELB improved by 4.19602
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.095
ELB improved by 3.28518
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.066
ELB improved by 3.02852
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.061
ELB improved by 3.00468
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.028
ELB improved by 3.03392
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.035
ELB improved by 2.99223
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.256
ELB improved by 2.77906
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.897
ELB improved by 2.3596
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.086
ELB improved by 1.8109
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.801
ELB improved by 1.2852
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.906
ELB improved by 0.894169
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.257
ELB improved by 0.649579
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.749
ELB improved by 0.508325
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.322
ELB improved by 0.426459
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.946
ELB improved by 0.375888
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.605
ELB improved by 0.341393
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.29
ELB improved by 0.31519
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.996
ELB improved by 0.293437
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.722
ELB improved by 0.27436
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.465
ELB improved by 0.257257
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.223
ELB improved by 0.241937
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.994
ELB improved by 0.22841
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.777
ELB improved by 0.216717
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.571
ELB improved by 0.206865
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.372
ELB improved by 0.198801
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.179
ELB improved by 0.192424
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.992
ELB improved by 0.187592
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.808
ELB improved by 0.184138
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.626
ELB improved by 0.181874
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.445
ELB improved by 0.180593
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.265
ELB improved by 0.180068
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.085
ELB improved by 0.180053
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.905
ELB improved by 0.180278
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.724
ELB improved by 0.18046
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.544
ELB improved by 0.180307
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.364
ELB improved by 0.179541
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.187
ELB improved by 0.17791
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.011
ELB improved by 0.175221
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.84
ELB improved by 0.17135
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.674
ELB improved by 0.166254
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.514
ELB improved by 0.159972
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.361
ELB improved by 0.152609
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.217
ELB improved by 0.144321
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.082
ELB improved by 0.135307
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.956
ELB improved by 0.125803
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.84
ELB improved by 0.116089
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.733
ELB improved by 0.106478
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.636
ELB improved by 0.0973078
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.547
ELB improved by 0.0889067
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.465
ELB improved by 0.0815753
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.39
ELB improved by 0.0755782
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.319
ELB improved by 0.0711595
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.25
ELB improved by 0.0685786
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.182
ELB improved by 0.0681522
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.112
ELB improved by 0.0702633
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.036
ELB improved by 0.0752383
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.953
ELB improved by 0.0829026
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.862
ELB improved by 0.0917008
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.764
ELB improved by 0.0980617
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.666
ELB improved by 0.0979073
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.576
ELB improved by 0.0903062
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.497
ELB improved by 0.0784868
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.431
ELB improved by 0.0664715
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.374
ELB improved by 0.056436
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.325
ELB improved by 0.0489201
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.281
ELB improved by 0.0438245
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.24
ELB improved by 0.040994
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.2
ELB improved by 0.0404497
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.157
ELB improved by 0.042501
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.11
ELB improved by 0.0478144
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.052
ELB improved by 0.0573373
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.981
ELB improved by 0.0716901
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.891
ELB improved by 0.0894741
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.786
ELB improved by 0.105368
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.673
ELB improved by 0.11236
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.564
ELB improved by 0.10891
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.464
ELB improved by 0.100126
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.374
ELB improved by 0.0908137
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.291
ELB improved by 0.0821356
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.218
ELB improved by 0.0732158
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.155
ELB improved by 0.0631636
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.103
ELB improved by 0.0521204
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.062
ELB improved by 0.0411893
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.03
ELB improved by 0.0316409
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.006
ELB improved by 0.0242014
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.987
ELB improved by 0.0188954
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.972
ELB improved by 0.0153113
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.959
ELB improved by 0.0129308
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.947
ELB improved by 0.0113196
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.937
ELB improved by 0.0101778
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.928
ELB improved by 0.00931931
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-829.202
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-593.744
ELB improved by 235.458
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-536.106
ELB improved by 57.6384
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-486.277
ELB improved by 49.8281
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.392
ELB improved by 31.8855
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.808
ELB improved by 14.584
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.891
ELB improved by 6.9174
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.405
ELB improved by 4.48566
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.791
ELB improved by 3.61355
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.492
ELB improved by 3.29977
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.306
ELB improved by 3.18583
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.148
ELB improved by 3.15813
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.968
ELB improved by 3.18002
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.755
ELB improved by 3.21218
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.594
ELB improved by 3.16148
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.698
ELB improved by 2.89606
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.299
ELB improved by 2.3992
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.49
ELB improved by 1.80908
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.208
ELB improved by 1.28199
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.326
ELB improved by 0.881205
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.736
ELB improved by 0.590761
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.346
ELB improved by 0.390182
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.082
ELB improved by 0.263892
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.892
ELB improved by 0.189495
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.746
ELB improved by 0.145939
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.627
ELB improved by 0.119436
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.524
ELB improved by 0.102346
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.434
ELB improved by 0.0906755
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.351
ELB improved by 0.0823223
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.275
ELB improved by 0.0761395
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.204
ELB improved by 0.0714691
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.136
ELB improved by 0.0679165
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.071
ELB improved by 0.0652365
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.007
ELB improved by 0.0632721
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.945
ELB improved by 0.0619216
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.884
ELB improved by 0.0611194
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.824
ELB improved by 0.0608245
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.762
ELB improved by 0.061014
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.701
ELB improved by 0.0616792
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.638
ELB improved by 0.0628233
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.574
ELB improved by 0.0644599
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.507
ELB improved by 0.0666131
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.438
ELB improved by 0.0693173
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.365
ELB improved by 0.072618
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.288
ELB improved by 0.0765727
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.207
ELB improved by 0.081253
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.12
ELB improved by 0.0867468
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.027
ELB improved by 0.0931615
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.927
ELB improved by 0.100629
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.817
ELB improved by 0.109313
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.698
ELB improved by 0.119417
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.567
ELB improved by 0.131199
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.422
ELB improved by 0.14499
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.26
ELB improved by 0.161228
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.08
ELB improved by 0.180501
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.876
ELB improved by 0.203622
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.645
ELB improved by 0.231729
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.378
ELB improved by 0.266344
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.069
ELB improved by 0.309133
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.709
ELB improved by 0.360518
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.292
ELB improved by 0.416153
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.829
ELB improved by 0.463931
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.338
ELB improved by 0.490599
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.844
ELB improved by 0.494214
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.362
ELB improved by 0.481742
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.903
ELB improved by 0.458792
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.475
ELB improved by 0.428112
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.083
ELB improved by 0.392028
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.73
ELB improved by 0.353281
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.415
ELB improved by 0.314612
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.137
ELB improved by 0.278235
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.891
ELB improved by 0.245626
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.674
ELB improved by 0.217573
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.479
ELB improved by 0.194321
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.304
ELB improved by 0.175641
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.143
ELB improved by 0.160851
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.994
ELB improved by 0.148902
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.855
ELB improved by 0.138689
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.726
ELB improved by 0.129348
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.606
ELB improved by 0.120097
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.496
ELB improved by 0.109784
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.399
ELB improved by 0.0972198
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.316
ELB improved by 0.0824847
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.249
ELB improved by 0.0673948
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.195
ELB improved by 0.0541117
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.151
ELB improved by 0.0436803
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.115
ELB improved by 0.03596
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.085
ELB improved by 0.0303044
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.059
ELB improved by 0.0260693
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.036
ELB improved by 0.0227814
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.016
ELB improved by 0.0201337
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.998
ELB improved by 0.017936
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.982
ELB improved by 0.0160708
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.967
ELB improved by 0.014463
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.954
ELB improved by 0.0130628
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.943
ELB improved by 0.0118345
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.932
ELB improved by 0.0107517
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.922
ELB improved by 0.00979359
ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
>
> proc.time()
user system elapsed
2.442 0.236 2.665
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.052 | 0.023 | 0.075 | |
| getPIPs | 0.047 | 0.015 | 0.062 | |
| graper | 0.085 | 0.015 | 0.100 | |
| makeExampleData | 0.010 | 0.001 | 0.010 | |
| makeExampleDataWithUnequalGroups | 0.012 | 0.001 | 0.013 | |
| plotELBO | 0.327 | 0.020 | 0.347 | |
| plotGroupPenalties | 1.068 | 0.055 | 1.123 | |
| plotPosterior | 0.630 | 0.017 | 0.648 | |
| predict.graper | 2.052 | 0.066 | 2.119 | |
| print.graper | 0.050 | 0.012 | 0.062 | |