Multiple platform build/check report for BioC 3.23 - CHECK results for graper on nebbiolo1

Hostname	OS	Arch (*)	R version	Installed pkgs
nebbiolo1	Linux (Ubuntu 24.04.4 LTS)	x86_64	4.6.0 RC (2026-04-17 r89917) -- "Because it was There"	4783
kjohnson3	macOS 13.7.7 Ventura	arm64	4.6.0 alpha (2026-04-08 r89818)	4701
Click on any hostname to see more info about the system (e.g. compilers) () as reported by 'uname -p', except on Windows and Mac OS X*

CHECK results for graper on nebbiolo1

To the developers/maintainers of the graper package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Summary

Package: graper

Version: 1.27.0

Command: /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.23-bioc/R/site-library --timings graper_1.27.0.tar.gz

StartedAt: 2026-04-23 00:41:36 -0400 (Thu, 23 Apr 2026)

EndedAt: 2026-04-23 00:43:07 -0400 (Thu, 23 Apr 2026)

EllapsedTime: 91.2 seconds

RetCode: 0

Status: OK

CheckDir: graper.Rcheck

Warnings: 0

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD check --install=check:graper.install-out.txt --library=/home/biocbuild/bbs-3.23-bioc/R/site-library --timings graper_1.27.0.tar.gz
###
##############################################################################
##############################################################################


* using log directory ‘/home/biocbuild/bbs-3.23-bioc/meat/graper.Rcheck’
* using R version 4.6.0 RC (2026-04-17 r89917)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    gcc (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0
    GNU Fortran (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0
* running under: Ubuntu 24.04.4 LTS
* using session charset: UTF-8
* current time: 2026-04-23 04:41:36 UTC
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.27.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0’
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... INFO
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘testthat.R’
 OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* DONE

Status: 1 NOTE
See
  ‘/home/biocbuild/bbs-3.23-bioc/meat/graper.Rcheck/00check.log’
for details.

Installation output

graper.Rcheck/00install.out

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.23-bioc/R/bin/R CMD INSTALL graper
###
##############################################################################
##############################################################################


* installing to library ‘/home/biocbuild/bbs-3.23-bioc/R/site-library’
* installing *source* package ‘graper’ ...
** this is package ‘graper’ version ‘1.27.0’
** using staged installation
** libs
using C++ compiler: ‘g++ (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0’
g++ -std=gnu++20 -I"/home/biocbuild/bbs-3.23-bioc/R/include" -DNDEBUG  -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/BH/include' -I/usr/local/include    -fpic  -g -O2  -Wall -Werror=format-security  -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++20 -I"/home/biocbuild/bbs-3.23-bioc/R/include" -DNDEBUG  -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/RcppArmadillo/include' -I'/home/biocbuild/bbs-3.23-bioc/R/site-library/BH/include' -I/usr/local/include    -fpic  -g -O2  -Wall -Werror=format-security  -c fit_graper.cpp -o fit_graper.o
g++ -std=gnu++20 -shared -L/home/biocbuild/bbs-3.23-bioc/R/lib -L/usr/local/lib -o graper.so RcppExports.o fit_graper.o -llapack -L/home/biocbuild/bbs-3.23-bioc/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/biocbuild/bbs-3.23-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.23-bioc/R/site-library/00LOCK-graper/00new/graper/libs
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (graper)

Tests output

graper.Rcheck/tests/testthat.Rout


R version 4.6.0 RC (2026-04-17 r89917) -- "Because it was There"
Copyright (C) 2026 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> library(testthat)
> library(graper)
> 
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-836.912
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-553.168
ELB improved by 283.744

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-492.884
ELB improved by 60.2838

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-458.616
ELB improved by 34.2684

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.106
ELB improved by 13.5098

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-439.076
ELB improved by 6.02961

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.192
ELB improved by 3.88373

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.72
ELB improved by 3.47214

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.161
ELB improved by 3.55914

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.414
ELB improved by 3.74669

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.595
ELB improved by 3.81919

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.001
ELB improved by 3.59427

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.956
ELB improved by 3.04546

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.567
ELB improved by 2.38808

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.697
ELB improved by 1.8705

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.127
ELB improved by 1.56958

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.691
ELB improved by 1.43672

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.285
ELB improved by 1.40548

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.861
ELB improved by 1.42464

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.397
ELB improved by 1.46335

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.875
ELB improved by 1.52177

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.262
ELB improved by 1.61375

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.519
ELB improved by 1.74248

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.626
ELB improved by 1.89294

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.597
ELB improved by 2.02969

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.492
ELB improved by 2.10477

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.42
ELB improved by 2.07133

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.528
ELB improved by 1.89233

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-385.96
ELB improved by 1.56817

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-384.788
ELB improved by 1.17184

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.976
ELB improved by 0.812159

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.425
ELB improved by 0.550831

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-383.041
ELB improved by 0.38417

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.758
ELB improved by 0.282793

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.537
ELB improved by 0.221655

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.351
ELB improved by 0.185915

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.183
ELB improved by 0.167861

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-382.019
ELB improved by 0.163244

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.852
ELB improved by 0.167456

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.681
ELB improved by 0.171295

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.518
ELB improved by 0.162569

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.379
ELB improved by 0.138914

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.268
ELB improved by 0.111268

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.18
ELB improved by 0.088483

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.109
ELB improved by 0.0708966

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.052
ELB improved by 0.0562656

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-381.009
ELB improved by 0.0437776

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.975
ELB improved by 0.0337265

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.949
ELB improved by 0.0262573

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.928
ELB improved by 0.0210042

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.91
ELB improved by 0.0173683

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.895
ELB improved by 0.0148043

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.882
ELB improved by 0.0129219

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.871
ELB improved by 0.0114739

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.861
ELB improved by 0.0103115

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-380.851
ELB improved by 0.00934669

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-917.475
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-581.783
ELB improved by 335.692

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-526.087
ELB improved by 55.6966

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-496.408
ELB improved by 29.679

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-485.52
ELB improved by 10.8882

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-480.414
ELB improved by 5.10517

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-476.732
ELB improved by 3.68268

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-473.51
ELB improved by 3.22174

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-470.493
ELB improved by 3.01717

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-467.636
ELB improved by 2.85636

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-464.974
ELB improved by 2.6622

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-462.575
ELB improved by 2.39922

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-460.512
ELB improved by 2.06266

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-458.824
ELB improved by 1.6888

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-457.488
ELB improved by 1.33512

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-456.447
ELB improved by 1.0419

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-455.626
ELB improved by 0.820461

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.963
ELB improved by 0.663053

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.411
ELB improved by 0.55181

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-453.944
ELB improved by 0.467153

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-453.547
ELB improved by 0.396716

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-453.21
ELB improved by 0.337425

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.92
ELB improved by 0.289824

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.667
ELB improved by 0.253289

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.441
ELB improved by 0.225709

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.236
ELB improved by 0.204701

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-452.048
ELB improved by 0.188323

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.873
ELB improved by 0.175191

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.709
ELB improved by 0.164369

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.553
ELB improved by 0.155224

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.406
ELB improved by 0.147319

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.266
ELB improved by 0.140344

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.132
ELB improved by 0.134071

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.003
ELB improved by 0.128331

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.88
ELB improved by 0.123

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.762
ELB improved by 0.117985

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.649
ELB improved by 0.113225

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.54
ELB improved by 0.108682

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.436
ELB improved by 0.10434

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.336
ELB improved by 0.100201

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.24
ELB improved by 0.0962854

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.147
ELB improved by 0.0926287

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.058
ELB improved by 0.0892806

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.971
ELB improved by 0.0863028

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.888
ELB improved by 0.0837657

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.806
ELB improved by 0.0817413

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.726
ELB improved by 0.0802914

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.646
ELB improved by 0.0794473

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.567
ELB improved by 0.0791842

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.487
ELB improved by 0.0793997

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.408
ELB improved by 0.0799127

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.327
ELB improved by 0.0805011

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.246
ELB improved by 0.0809735

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.165
ELB improved by 0.0812383

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.084
ELB improved by 0.0813231

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-449.002
ELB improved by 0.0813265

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.921
ELB improved by 0.0813315

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.84
ELB improved by 0.0813271

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.758
ELB improved by 0.0811825

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.678
ELB improved by 0.0806954

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.598
ELB improved by 0.0797027

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.52
ELB improved by 0.0781893

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.443
ELB improved by 0.0763135

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.369
ELB improved by 0.0743277

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.297
ELB improved by 0.0724646

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.226
ELB improved by 0.0708692

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.156
ELB improved by 0.0695955

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.088
ELB improved by 0.0686385

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-448.02
ELB improved by 0.0679662

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.952
ELB improved by 0.0675407

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.885
ELB improved by 0.0673261

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.817
ELB improved by 0.0672915

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.75
ELB improved by 0.0674101

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.682
ELB improved by 0.0676579

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.614
ELB improved by 0.0680123

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.546
ELB improved by 0.0684524

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.477
ELB improved by 0.0689587

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.407
ELB improved by 0.0695155

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.337
ELB improved by 0.0701142

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.267
ELB improved by 0.070761

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.195
ELB improved by 0.0714889

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.123
ELB improved by 0.0723797

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.049
ELB improved by 0.0735995

iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.974
ELB improved by 0.0754594

iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.895
ELB improved by 0.078513

iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.811
ELB improved by 0.0836917

iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.719
ELB improved by 0.0924041

iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.613
ELB improved by 0.10624

iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.487
ELB improved by 0.12535

iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.342
ELB improved by 0.144992

iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.188
ELB improved by 0.154794

iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.04
ELB improved by 0.148044

iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.91
ELB improved by 0.129834

iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.8
ELB improved by 0.109342

iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.709
ELB improved by 0.0913642

iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.632
ELB improved by 0.0768084

iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.567
ELB improved by 0.0652635

iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.511
ELB improved by 0.0561611

iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.462
ELB improved by 0.0490352

iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.418
ELB improved by 0.0435248

iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.379
ELB improved by 0.0393419

iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.343
ELB improved by 0.0362497

iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.309
ELB improved by 0.0340509

iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.276
ELB improved by 0.0325796

iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.244
ELB improved by 0.0316928

iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.213
ELB improved by 0.0312626

iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.182
ELB improved by 0.0311663

iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.151
ELB improved by 0.0312786

iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.119
ELB improved by 0.0314664

iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.088
ELB improved by 0.0315904

iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.056
ELB improved by 0.0315183

iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-445.025
ELB improved by 0.0311501

iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.994
ELB improved by 0.0304493

iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.965
ELB improved by 0.0294642

iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.937
ELB improved by 0.0283255

iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.909
ELB improved by 0.0272207

iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.883
ELB improved by 0.0263611

iteration 118
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.857
ELB improved by 0.0259596

iteration 119
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.831
ELB improved by 0.0262344

iteration 120
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.803
ELB improved by 0.0274397

iteration 121
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.774
ELB improved by 0.0299221

iteration 122
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.739
ELB improved by 0.0342032

iteration 123
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.698
ELB improved by 0.0410852

iteration 124
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.647
ELB improved by 0.0517497

iteration 125
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.579
ELB improved by 0.06773

iteration 126
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.488
ELB improved by 0.0904364

iteration 127
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.369
ELB improved by 0.119793

iteration 128
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.216
ELB improved by 0.152343

iteration 129
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.035
ELB improved by 0.181331

iteration 130
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.835
ELB improved by 0.200176

iteration 131
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.63
ELB improved by 0.204283

iteration 132
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.44
ELB improved by 0.19088

iteration 133
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.276
ELB improved by 0.163219

iteration 134
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.146
ELB improved by 0.130529

iteration 135
Updating parameters of variational distributions...
Calculating ELB..
ELB=-443.045
ELB improved by 0.100513

iteration 136
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.969
ELB improved by 0.0760901

iteration 137
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.912
ELB improved by 0.0572787

iteration 138
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.869
ELB improved by 0.0431641

iteration 139
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.836
ELB improved by 0.0327233

iteration 140
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.811
ELB improved by 0.0250615

iteration 141
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.792
ELB improved by 0.01946

iteration 142
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.776
ELB improved by 0.0153656

iteration 143
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.764
ELB improved by 0.0123645

iteration 144
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.754
ELB improved by 0.0101533

iteration 145
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.745
ELB improved by 0.00851181

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-879.804
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-586.569
ELB improved by 293.235

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-527.45
ELB improved by 59.1189

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-487.843
ELB improved by 39.6077

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-471.209
ELB improved by 16.6341

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-464.435
ELB improved by 6.77339

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-459.675
ELB improved by 4.76002

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-455.434
ELB improved by 4.24076

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.233
ELB improved by 4.20137

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.836
ELB improved by 4.39714

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.248
ELB improved by 4.58768

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.776
ELB improved by 4.47254

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.909
ELB improved by 3.86616

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.986
ELB improved by 2.92356

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.983
ELB improved by 2.00307

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.654
ELB improved by 1.32871

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.753
ELB improved by 0.901154

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.114
ELB improved by 0.638909

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.635
ELB improved by 0.478875

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.255
ELB improved by 0.380472

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.937
ELB improved by 0.317582

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.662
ELB improved by 0.274957

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.418
ELB improved by 0.244293

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.197
ELB improved by 0.221062

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.994
ELB improved by 0.202683

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.807
ELB improved by 0.18759

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.632
ELB improved by 0.174784

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.468
ELB improved by 0.163607

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.315
ELB improved by 0.153622

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.17
ELB improved by 0.144542

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.034
ELB improved by 0.136183

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.905
ELB improved by 0.128435

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.784
ELB improved by 0.121239

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.67
ELB improved by 0.11457

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.561
ELB improved by 0.108428

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.458
ELB improved by 0.102831

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.361
ELB improved by 0.0978153

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.267
ELB improved by 0.0934393

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.177
ELB improved by 0.0897993

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.09
ELB improved by 0.0870555

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.005
ELB improved by 0.0854853

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.919
ELB improved by 0.0855893

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.831
ELB improved by 0.0883046

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.735
ELB improved by 0.0954125

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.625
ELB improved by 0.110105

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.489
ELB improved by 0.13657

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.315
ELB improved by 0.174012

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.111
ELB improved by 0.204043

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.909
ELB improved by 0.201934

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.735
ELB improved by 0.174191

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.59
ELB improved by 0.144121

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.469
ELB improved by 0.121347

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.364
ELB improved by 0.105225

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.271
ELB improved by 0.0933667

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.186
ELB improved by 0.0841242

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.11
ELB improved by 0.0766024

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.039
ELB improved by 0.0703274

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.974
ELB improved by 0.0650258

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.914
ELB improved by 0.0605193

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.857
ELB improved by 0.0566795

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.804
ELB improved by 0.0534082

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.753
ELB improved by 0.0506274

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.705
ELB improved by 0.048275

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.659
ELB improved by 0.0463004

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.614
ELB improved by 0.0446628

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.571
ELB improved by 0.0433296

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.528
ELB improved by 0.0422748

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.487
ELB improved by 0.0414784

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.446
ELB improved by 0.0409258

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.405
ELB improved by 0.0406064

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.365
ELB improved by 0.040514

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.324
ELB improved by 0.040645

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.283
ELB improved by 0.0409981

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.242
ELB improved by 0.0415728

iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.199
ELB improved by 0.0423678

iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.156
ELB improved by 0.0433792

iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.111
ELB improved by 0.0445986

iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.065
ELB improved by 0.0460115

iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.018
ELB improved by 0.0475956

iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.968
ELB improved by 0.0493213

iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.917
ELB improved by 0.0511519

iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.864
ELB improved by 0.0530459

iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.809
ELB improved by 0.054959

iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.752
ELB improved by 0.0568457

iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.694
ELB improved by 0.0586591

iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.633
ELB improved by 0.0603491

iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.571
ELB improved by 0.0618583

iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.508
ELB improved by 0.0631173

iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.444
ELB improved by 0.0640414

iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.38
ELB improved by 0.0645297

iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.315
ELB improved by 0.0644713

iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.252
ELB improved by 0.0637583

iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.189
ELB improved by 0.0623059

iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.129
ELB improved by 0.0600749

iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.072
ELB improved by 0.0570898

iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.019
ELB improved by 0.0534436

iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.969
ELB improved by 0.0492889

iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.925
ELB improved by 0.0448142

iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.884
ELB improved by 0.0402159

iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.849
ELB improved by 0.0356717

iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.817
ELB improved by 0.0313243

iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.79
ELB improved by 0.027274

iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.766
ELB improved by 0.0235807

iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.746
ELB improved by 0.020271

iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.729
ELB improved by 0.0173468

iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.714
ELB improved by 0.0147938

iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.701
ELB improved by 0.0125878

iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.691
ELB improved by 0.0106993

iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.682
ELB improved by 0.0090964

ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-812.711
ELB improved by inf

iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-576.246
ELB improved by 236.465

iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-516.218
ELB improved by 60.028

iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-467.221
ELB improved by 48.9968

iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.168
ELB improved by 25.0526

iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.513
ELB improved by 8.65573

iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.692
ELB improved by 3.82048

iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.288
ELB improved by 2.40407

iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.398
ELB improved by 1.89003

iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.716
ELB improved by 1.68174

iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.116
ELB improved by 1.60065

iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.524
ELB improved by 1.59145

iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.888
ELB improved by 1.6367

iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.161
ELB improved by 1.72632

iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.325
ELB improved by 1.83637

iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.413
ELB improved by 1.91228

iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.537
ELB improved by 1.87576

iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-409.86
ELB improved by 1.67645

iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-408.51
ELB improved by 1.35015

iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.51
ELB improved by 1.00065

iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.794
ELB improved by 0.715955

iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-406.272
ELB improved by 0.522146

iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.868
ELB improved by 0.403334

iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.534
ELB improved by 0.334673

iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.236
ELB improved by 0.297329

iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.956
ELB improved by 0.280024

iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.679
ELB improved by 0.276803

iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.394
ELB improved by 0.284981

iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-404.091
ELB improved by 0.303882

iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.756
ELB improved by 0.334069

iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.38
ELB improved by 0.376667

iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.947
ELB improved by 0.432509

iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-402.446
ELB improved by 0.501259

iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.865
ELB improved by 0.580758

iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.199
ELB improved by 0.666037

iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.45
ELB improved by 0.749031

iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.627
ELB improved by 0.822729

iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.741
ELB improved by 0.886259

iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.796
ELB improved by 0.945313

iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.791
ELB improved by 1.0053

iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.728
ELB improved by 1.06232

iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.624
ELB improved by 1.10409

iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.508
ELB improved by 1.11583

iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.427
ELB improved by 1.08154

iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.44
ELB improved by 0.986431

iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.607
ELB improved by 0.833197

iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.954
ELB improved by 0.653093

iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.469
ELB improved by 0.485604

iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.115
ELB improved by 0.353803

iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.854
ELB improved by 0.260891

iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.655
ELB improved by 0.199274

iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.495
ELB improved by 0.159326

iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.362
ELB improved by 0.133456

iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.245
ELB improved by 0.116758

iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.139
ELB improved by 0.106411

iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.038
ELB improved by 0.100925

iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.938
ELB improved by 0.0995208

iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.836
ELB improved by 0.101743

iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.729
ELB improved by 0.107524

iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.611
ELB improved by 0.117914

iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.475
ELB improved by 0.135971

iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.31
ELB improved by 0.164908

iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.113
ELB improved by 0.197468

iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.909
ELB improved by 0.203355

iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.748
ELB improved by 0.161414

iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.646
ELB improved by 0.102202

iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.586
ELB improved by 0.0592814

iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.551
ELB improved by 0.0356953

iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.527
ELB improved by 0.0237267

iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.509
ELB improved by 0.0175202

iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.495
ELB improved by 0.0140548

iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.483
ELB improved by 0.0119216

iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.473
ELB improved by 0.0104708

iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.464
ELB improved by 0.0093959

ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
> 
> proc.time()
   user  system elapsed 
  2.442   0.210   2.641

Example timings

graper.Rcheck/graper-Ex.timings

name	user	system	elapsed
coef.graper	0.053	0.023	0.077
getPIPs	0.068	0.038	0.106
graper	0.082	0.018	0.100
makeExampleData	0.009	0.001	0.010
makeExampleDataWithUnequalGroups	0.011	0.000	0.011
plotELBO	0.294	0.028	0.322
plotGroupPenalties	0.922	0.009	0.932
plotPosterior	0.652	0.013	0.665
predict.graper	2.111	0.053	2.164
print.graper	0.051	0.014	0.064