Britta Velten
| Snapshot Date: 2026-04-13 13:40 -0400 (Mon, 13 Apr 2026) |
| git_url: https://git.bioconductor.org/packages/graper |
| git_branch: devel |
| git_last_commit: 95474d7 |
| git_last_commit_date: 2025-10-29 10:49:21 -0400 (Wed, 29 Oct 2025) |
| Back to Multiple platform build/check report for BioC 3.23: simplified long |
|
This page was generated on 2026-04-14 11:35 -0400 (Tue, 14 Apr 2026).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 24.04.4 LTS) | x86_64 | 4.6.0 alpha (2026-04-05 r89794) | 4924 |
| kjohnson3 | macOS 13.7.7 Ventura | arm64 | 4.6.0 alpha (2026-04-08 r89818) | 4655 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 936/2394 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| graper 1.27.0 (landing page) Britta Velten
| nebbiolo1 | Linux (Ubuntu 24.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||||
| kjohnson3 | macOS 13.7.7 Ventura / arm64 | OK | OK | OK | OK | | ||||||||
| See other builds for graper in R Universe. | ||||||||||||||
|
To the developers/maintainers of the graper package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/graper.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: graper |
| Version: 1.27.0 |
| Command: /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.27.0.tar.gz |
| StartedAt: 2026-04-13 20:03:08 -0400 (Mon, 13 Apr 2026) |
| EndedAt: 2026-04-13 20:03:39 -0400 (Mon, 13 Apr 2026) |
| EllapsedTime: 30.4 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: graper.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:graper.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings graper_1.27.0.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/Users/biocbuild/bbs-3.23-bioc/meat/graper.Rcheck’
* using R version 4.6.0 alpha (2026-04-08 r89818)
* using platform: aarch64-apple-darwin23
* R was compiled by
Apple clang version 17.0.0 (clang-1700.3.19.1)
GNU Fortran (GCC) 14.2.0
* running under: macOS Tahoe 26.3.1
* using session charset: UTF-8
* current time: 2026-04-14 00:03:08 UTC
* using option ‘--no-vignettes’
* checking for file ‘graper/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘graper’ version ‘1.27.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘graper’ can be installed ... OK
* used C++ compiler: ‘Apple clang version 17.0.0 (clang-1700.6.4.2)’
* used SDK: ‘MacOSX26.2.sdk’
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... NOTE
checkRd: (-1) predict.graper.Rd:19-21: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:22: Lost braces in \itemize; meant \describe ?
checkRd: (-1) predict.graper.Rd:23-24: Lost braces in \itemize; meant \describe ?
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... INFO
Note: information on .o files is not available
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘testthat.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE
Status: 1 NOTE
See
‘/Users/biocbuild/bbs-3.23-bioc/meat/graper.Rcheck/00check.log’
for details.
graper.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL graper ### ############################################################################## ############################################################################## * installing to library ‘/Library/Frameworks/R.framework/Versions/4.6/Resources/library’ * installing *source* package ‘graper’ ... ** this is package ‘graper’ version ‘1.27.0’ ** using staged installation ** libs using C++ compiler: ‘Apple clang version 17.0.0 (clang-1700.6.4.2)’ using SDK: ‘MacOSX26.2.sdk’ clang++ -arch arm64 -std=gnu++20 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Library/Frameworks/R.framework/Versions/4.6/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.6/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.6/Resources/library/BH/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c RcppExports.cpp -o RcppExports.o clang++ -arch arm64 -std=gnu++20 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Library/Frameworks/R.framework/Versions/4.6/Resources/library/Rcpp/include' -I'/Library/Frameworks/R.framework/Versions/4.6/Resources/library/RcppArmadillo/include' -I'/Library/Frameworks/R.framework/Versions/4.6/Resources/library/BH/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c fit_graper.cpp -o fit_graper.o clang++ -arch arm64 -std=gnu++20 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/arm64/lib -o graper.so RcppExports.o fit_graper.o -L/Library/Frameworks/R.framework/Resources/lib -lRlapack -L/Library/Frameworks/R.framework/Resources/lib -lRblas -L/opt/gfortran/lib/gcc/aarch64-apple-darwin20.0/14.2.0 -L/opt/gfortran/lib -lemutls_w -lheapt_w -lgfortran -lquadmath -F/Library/Frameworks/R.framework/.. -framework R installing to /Library/Frameworks/R.framework/Versions/4.6/Resources/library/00LOCK-graper/00new/graper/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (graper)
graper.Rcheck/tests/testthat.Rout
R version 4.6.0 alpha (2026-04-08 r89818)
Copyright (C) 2026 The R Foundation for Statistical Computing
Platform: aarch64-apple-darwin23
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> library(testthat)
> library(graper)
>
> test_check("graper")
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-911.612
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-581.291
ELB improved by 330.321
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-521.019
ELB improved by 60.2725
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-484.928
ELB improved by 36.0902
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-470.051
ELB improved by 14.877
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-463.284
ELB improved by 6.76726
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-458.823
ELB improved by 4.46099
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-455.03
ELB improved by 3.79349
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-451.416
ELB improved by 3.61341
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.824
ELB improved by 3.59204
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.228
ELB improved by 3.59602
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.696
ELB improved by 3.53223
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.373
ELB improved by 3.32268
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-434.42
ELB improved by 2.95337
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.91
ELB improved by 2.51014
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.809
ELB improved by 2.1009
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.068
ELB improved by 1.74095
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.675
ELB improved by 1.39307
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.6
ELB improved by 1.07531
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.772
ELB improved by 0.827729
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.117
ELB improved by 0.655217
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.577
ELB improved by 0.540019
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.113
ELB improved by 0.463545
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.7
ELB improved by 0.412981
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.32
ELB improved by 0.380547
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.958
ELB improved by 0.361496
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.605
ELB improved by 0.352664
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.254
ELB improved by 0.351791
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.896
ELB improved by 0.357201
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.529
ELB improved by 0.36736
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.149
ELB improved by 0.380251
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.755
ELB improved by 0.393307
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.351
ELB improved by 0.404612
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.936
ELB improved by 0.414397
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.512
ELB improved by 0.424886
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.073
ELB improved by 0.438729
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.615
ELB improved by 0.457901
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.131
ELB improved by 0.48346
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.616
ELB improved by 0.515348
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.064
ELB improved by 0.551814
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.476
ELB improved by 0.58866
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.857
ELB improved by 0.619042
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.222
ELB improved by 0.634586
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.594
ELB improved by 0.627871
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.999
ELB improved by 0.595259
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-412.46
ELB improved by 0.53871
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.995
ELB improved by 0.465466
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.609
ELB improved by 0.385547
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.301
ELB improved by 0.308365
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-411.061
ELB improved by 0.240311
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.876
ELB improved by 0.184191
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.736
ELB improved by 0.140044
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.63
ELB improved by 0.106389
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.549
ELB improved by 0.0812205
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.486
ELB improved by 0.062592
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.437
ELB improved by 0.0488571
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.398
ELB improved by 0.038723
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.367
ELB improved by 0.0312159
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.342
ELB improved by 0.0256191
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.32
ELB improved by 0.0214117
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.302
ELB improved by 0.0182175
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.286
ELB improved by 0.0157652
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.272
ELB improved by 0.0138591
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.26
ELB improved by 0.0123576
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.249
ELB improved by 0.0111579
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.239
ELB improved by 0.0101853
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.229
ELB improved by 0.00938509
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-851.216
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-570.898
ELB improved by 280.318
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-505.584
ELB improved by 65.3136
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-460.289
ELB improved by 45.2954
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.179
ELB improved by 20.11
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.5
ELB improved by 8.67841
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.491
ELB improved by 5.00878
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.808
ELB improved by 3.68298
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.603
ELB improved by 3.20565
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.538
ELB improved by 3.06438
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-413.492
ELB improved by 3.04596
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-410.479
ELB improved by 3.01334
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-407.631
ELB improved by 2.84854
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-405.146
ELB improved by 2.48428
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-403.173
ELB improved by 1.97337
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-401.715
ELB improved by 1.45841
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-400.668
ELB improved by 1.04604
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.91
ELB improved by 0.758956
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-399.335
ELB improved by 0.57488
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.872
ELB improved by 0.46287
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.475
ELB improved by 0.39663
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-398.117
ELB improved by 0.357773
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.782
ELB improved by 0.334909
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.461
ELB improved by 0.321419
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-397.147
ELB improved by 0.313567
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.838
ELB improved by 0.309287
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.531
ELB improved by 0.307498
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-396.223
ELB improved by 0.307704
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.913
ELB improved by 0.309767
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.599
ELB improved by 0.313756
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-395.28
ELB improved by 0.319835
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.951
ELB improved by 0.328178
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.613
ELB improved by 0.338887
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-394.261
ELB improved by 0.351911
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.894
ELB improved by 0.366969
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.51
ELB improved by 0.38347
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-393.11
ELB improved by 0.400466
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.693
ELB improved by 0.416663
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-392.263
ELB improved by 0.430537
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.822
ELB improved by 0.440621
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-391.376
ELB improved by 0.445969
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.929
ELB improved by 0.446621
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.486
ELB improved by 0.443555
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-390.048
ELB improved by 0.437425
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.622
ELB improved by 0.42635
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-389.216
ELB improved by 0.405547
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.845
ELB improved by 0.371585
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.518
ELB improved by 0.326816
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.24
ELB improved by 0.277597
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-388.011
ELB improved by 0.229792
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.824
ELB improved by 0.186948
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.673
ELB improved by 0.150605
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.552
ELB improved by 0.120947
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.455
ELB improved by 0.0973579
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.376
ELB improved by 0.0788718
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.311
ELB improved by 0.0644772
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.258
ELB improved by 0.0532722
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.214
ELB improved by 0.0445176
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.176
ELB improved by 0.0376343
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.144
ELB improved by 0.0321796
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.116
ELB improved by 0.027819
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.092
ELB improved by 0.0243004
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.07
ELB improved by 0.0214336
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.051
ELB improved by 0.0190748
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.034
ELB improved by 0.0171147
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.019
ELB improved by 0.0154698
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-387.005
ELB improved by 0.0140762
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.992
ELB improved by 0.0128846
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.98
ELB improved by 0.0118569
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.969
ELB improved by 0.0109634
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.959
ELB improved by 0.0101809
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-386.949
ELB improved by 0.00949099
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-903.601
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-593.54
ELB improved by 310.061
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-530.388
ELB improved by 63.1519
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-487.541
ELB improved by 42.8478
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-468
ELB improved by 19.5411
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-459.49
ELB improved by 8.5095
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-454.419
ELB improved by 5.0707
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.332
ELB improved by 4.0872
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-446.493
ELB improved by 3.83906
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.7
ELB improved by 3.79254
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-438.948
ELB improved by 3.7523
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.358
ELB improved by 3.59022
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.158
ELB improved by 3.19957
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.576
ELB improved by 2.5829
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.68
ELB improved by 1.89562
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.366
ELB improved by 1.31368
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.461
ELB improved by 0.905369
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.813
ELB improved by 0.648147
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.322
ELB improved by 0.490971
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.932
ELB improved by 0.389482
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.615
ELB improved by 0.317054
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.353
ELB improved by 0.262266
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.132
ELB improved by 0.221016
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.941
ELB improved by 0.190754
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.772
ELB improved by 0.168892
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.619
ELB improved by 0.153111
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.477
ELB improved by 0.14168
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.344
ELB improved by 0.133442
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.216
ELB improved by 0.127659
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.092
ELB improved by 0.123865
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.971
ELB improved by 0.121754
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.85
ELB improved by 0.121127
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.728
ELB improved by 0.121846
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.604
ELB improved by 0.123816
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.477
ELB improved by 0.126969
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.346
ELB improved by 0.131255
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.209
ELB improved by 0.136631
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.066
ELB improved by 0.143056
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.916
ELB improved by 0.150482
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.757
ELB improved by 0.158853
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.589
ELB improved by 0.168096
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.41
ELB improved by 0.178124
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.222
ELB improved by 0.188829
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.022
ELB improved by 0.200088
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.81
ELB improved by 0.211755
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.586
ELB improved by 0.22366
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.351
ELB improved by 0.235601
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.103
ELB improved by 0.247326
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.845
ELB improved by 0.258524
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.576
ELB improved by 0.268808
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.298
ELB improved by 0.277731
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.013
ELB improved by 0.284814
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.724
ELB improved by 0.289605
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.432
ELB improved by 0.291748
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.141
ELB improved by 0.291023
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.854
ELB improved by 0.287321
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.573
ELB improved by 0.28051
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.303
ELB improved by 0.270214
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.047
ELB improved by 0.25569
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.811
ELB improved by 0.236139
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.6
ELB improved by 0.211548
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.416
ELB improved by 0.183431
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.262
ELB improved by 0.154489
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.134
ELB improved by 0.127379
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.031
ELB improved by 0.103742
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.946
ELB improved by 0.084106
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.878
ELB improved by 0.0682647
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.822
ELB improved by 0.0556875
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.777
ELB improved by 0.045773
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.739
ELB improved by 0.0379676
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.707
ELB improved by 0.031805
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.68
ELB improved by 0.0269099
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.657
ELB improved by 0.0229875
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.637
ELB improved by 0.0198108
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.62
ELB improved by 0.0172073
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.605
ELB improved by 0.0150477
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.592
ELB improved by 0.0132365
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.58
ELB improved by 0.0117033
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.57
ELB improved by 0.010396
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.56
ELB improved by 0.00927528
ELB converged
iteration 1
Updating parameters of variational distributions...
Calculating ELB..
ELB=-864.74
ELB improved by inf
iteration 2
Updating parameters of variational distributions...
Calculating ELB..
ELB=-593.931
ELB improved by 270.81
iteration 3
Updating parameters of variational distributions...
Calculating ELB..
ELB=-529.666
ELB improved by 64.2643
iteration 4
Updating parameters of variational distributions...
Calculating ELB..
ELB=-485.922
ELB improved by 43.7446
iteration 5
Updating parameters of variational distributions...
Calculating ELB..
ELB=-465.168
ELB improved by 20.7542
iteration 6
Updating parameters of variational distributions...
Calculating ELB..
ELB=-457.202
ELB improved by 7.96608
iteration 7
Updating parameters of variational distributions...
Calculating ELB..
ELB=-453.17
ELB improved by 4.03176
iteration 8
Updating parameters of variational distributions...
Calculating ELB..
ELB=-450.143
ELB improved by 3.02708
iteration 9
Updating parameters of variational distributions...
Calculating ELB..
ELB=-447.472
ELB improved by 2.67101
iteration 10
Updating parameters of variational distributions...
Calculating ELB..
ELB=-444.962
ELB improved by 2.50961
iteration 11
Updating parameters of variational distributions...
Calculating ELB..
ELB=-442.525
ELB improved by 2.43742
iteration 12
Updating parameters of variational distributions...
Calculating ELB..
ELB=-440.128
ELB improved by 2.39692
iteration 13
Updating parameters of variational distributions...
Calculating ELB..
ELB=-437.803
ELB improved by 2.32487
iteration 14
Updating parameters of variational distributions...
Calculating ELB..
ELB=-435.65
ELB improved by 2.15252
iteration 15
Updating parameters of variational distributions...
Calculating ELB..
ELB=-433.801
ELB improved by 1.84894
iteration 16
Updating parameters of variational distributions...
Calculating ELB..
ELB=-432.344
ELB improved by 1.45699
iteration 17
Updating parameters of variational distributions...
Calculating ELB..
ELB=-431.279
ELB improved by 1.06567
iteration 18
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.533
ELB improved by 0.746119
iteration 19
Updating parameters of variational distributions...
Calculating ELB..
ELB=-430.013
ELB improved by 0.519417
iteration 20
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.643
ELB improved by 0.370517
iteration 21
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.368
ELB improved by 0.274287
iteration 22
Updating parameters of variational distributions...
Calculating ELB..
ELB=-429.158
ELB improved by 0.210367
iteration 23
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.992
ELB improved by 0.166115
iteration 24
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.858
ELB improved by 0.134456
iteration 25
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.746
ELB improved by 0.111349
iteration 26
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.652
ELB improved by 0.0942445
iteration 27
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.571
ELB improved by 0.0813882
iteration 28
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.499
ELB improved by 0.0715286
iteration 29
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.435
ELB improved by 0.0637829
iteration 30
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.378
ELB improved by 0.0575415
iteration 31
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.325
ELB improved by 0.05239
iteration 32
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.277
ELB improved by 0.0480478
iteration 33
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.233
ELB improved by 0.0443237
iteration 34
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.192
ELB improved by 0.0410848
iteration 35
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.154
ELB improved by 0.0382372
iteration 36
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.118
ELB improved by 0.0357119
iteration 37
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.084
ELB improved by 0.0334575
iteration 38
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.053
ELB improved by 0.0314341
iteration 39
Updating parameters of variational distributions...
Calculating ELB..
ELB=-428.023
ELB improved by 0.0296103
iteration 40
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.995
ELB improved by 0.0279606
iteration 41
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.969
ELB improved by 0.0264639
iteration 42
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.944
ELB improved by 0.0251028
iteration 43
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.92
ELB improved by 0.0238621
iteration 44
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.897
ELB improved by 0.0227291
iteration 45
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.876
ELB improved by 0.0216927
iteration 46
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.855
ELB improved by 0.0207431
iteration 47
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.835
ELB improved by 0.019872
iteration 48
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.816
ELB improved by 0.0190717
iteration 49
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.798
ELB improved by 0.0183356
iteration 50
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.78
ELB improved by 0.017658
iteration 51
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.763
ELB improved by 0.0170335
iteration 52
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.746
ELB improved by 0.0164575
iteration 53
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.73
ELB improved by 0.0159258
iteration 54
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.715
ELB improved by 0.0154347
iteration 55
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.7
ELB improved by 0.0149809
iteration 56
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.685
ELB improved by 0.0145613
iteration 57
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.671
ELB improved by 0.0141733
iteration 58
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.658
ELB improved by 0.0138145
iteration 59
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.644
ELB improved by 0.0134826
iteration 60
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.631
ELB improved by 0.0131759
iteration 61
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.618
ELB improved by 0.0128925
iteration 62
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.605
ELB improved by 0.012631
iteration 63
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.593
ELB improved by 0.01239
iteration 64
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.581
ELB improved by 0.0121683
iteration 65
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.569
ELB improved by 0.0119648
iteration 66
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.557
ELB improved by 0.0117786
iteration 67
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.545
ELB improved by 0.0116091
iteration 68
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.534
ELB improved by 0.0114554
iteration 69
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.523
ELB improved by 0.0113172
iteration 70
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.511
ELB improved by 0.011194
iteration 71
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.5
ELB improved by 0.0110854
iteration 72
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.489
ELB improved by 0.0109914
iteration 73
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.478
ELB improved by 0.0109117
iteration 74
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.468
ELB improved by 0.0108466
iteration 75
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.457
ELB improved by 0.010796
iteration 76
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.446
ELB improved by 0.0107604
iteration 77
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.435
ELB improved by 0.01074
iteration 78
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.425
ELB improved by 0.0107354
iteration 79
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.414
ELB improved by 0.0107473
iteration 80
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.403
ELB improved by 0.0107765
iteration 81
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.392
ELB improved by 0.010824
iteration 82
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.381
ELB improved by 0.010891
iteration 83
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.37
ELB improved by 0.010979
iteration 84
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.359
ELB improved by 0.0110896
iteration 85
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.348
ELB improved by 0.0112249
iteration 86
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.337
ELB improved by 0.0113872
iteration 87
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.325
ELB improved by 0.0115793
iteration 88
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.313
ELB improved by 0.0118044
iteration 89
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.301
ELB improved by 0.0120664
iteration 90
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.289
ELB improved by 0.01237
iteration 91
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.276
ELB improved by 0.0127206
iteration 92
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.263
ELB improved by 0.0131249
iteration 93
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.249
ELB improved by 0.0135907
iteration 94
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.235
ELB improved by 0.0141278
iteration 95
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.221
ELB improved by 0.0147481
iteration 96
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.205
ELB improved by 0.0154662
iteration 97
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.189
ELB improved by 0.0163005
iteration 98
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.171
ELB improved by 0.0172742
iteration 99
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.153
ELB improved by 0.0184167
iteration 100
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.133
ELB improved by 0.0197666
iteration 101
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.112
ELB improved by 0.0213741
iteration 102
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.089
ELB improved by 0.0233071
iteration 103
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.063
ELB improved by 0.025658
iteration 104
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.034
ELB improved by 0.0285559
iteration 105
Updating parameters of variational distributions...
Calculating ELB..
ELB=-427.002
ELB improved by 0.0321853
iteration 106
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.965
ELB improved by 0.0368159
iteration 107
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.923
ELB improved by 0.0428507
iteration 108
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.872
ELB improved by 0.0509029
iteration 109
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.81
ELB improved by 0.061915
iteration 110
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.732
ELB improved by 0.077327
iteration 111
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.633
ELB improved by 0.0992711
iteration 112
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.502
ELB improved by 0.130672
iteration 113
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.327
ELB improved by 0.174971
iteration 114
Updating parameters of variational distributions...
Calculating ELB..
ELB=-426.092
ELB improved by 0.235161
iteration 115
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.78
ELB improved by 0.312497
iteration 116
Updating parameters of variational distributions...
Calculating ELB..
ELB=-425.374
ELB improved by 0.406101
iteration 117
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.862
ELB improved by 0.512014
iteration 118
Updating parameters of variational distributions...
Calculating ELB..
ELB=-424.244
ELB improved by 0.617392
iteration 119
Updating parameters of variational distributions...
Calculating ELB..
ELB=-423.544
ELB improved by 0.70059
iteration 120
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.798
ELB improved by 0.745807
iteration 121
Updating parameters of variational distributions...
Calculating ELB..
ELB=-422.053
ELB improved by 0.744848
iteration 122
Updating parameters of variational distributions...
Calculating ELB..
ELB=-421.357
ELB improved by 0.696307
iteration 123
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.745
ELB improved by 0.611716
iteration 124
Updating parameters of variational distributions...
Calculating ELB..
ELB=-420.235
ELB improved by 0.509666
iteration 125
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.828
ELB improved by 0.407393
iteration 126
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.511
ELB improved by 0.317076
iteration 127
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.266
ELB improved by 0.244837
iteration 128
Updating parameters of variational distributions...
Calculating ELB..
ELB=-419.074
ELB improved by 0.191847
iteration 129
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.917
ELB improved by 0.156878
iteration 130
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.778
ELB improved by 0.138908
iteration 131
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.639
ELB improved by 0.139131
iteration 132
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.477
ELB improved by 0.162168
iteration 133
Updating parameters of variational distributions...
Calculating ELB..
ELB=-418.264
ELB improved by 0.213604
iteration 134
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.979
ELB improved by 0.284253
iteration 135
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.648
ELB improved by 0.330843
iteration 136
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.328
ELB improved by 0.320436
iteration 137
Updating parameters of variational distributions...
Calculating ELB..
ELB=-417.045
ELB improved by 0.282671
iteration 138
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.792
ELB improved by 0.252852
iteration 139
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.555
ELB improved by 0.237043
iteration 140
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.32
ELB improved by 0.235552
iteration 141
Updating parameters of variational distributions...
Calculating ELB..
ELB=-416.065
ELB improved by 0.255165
iteration 142
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.771
ELB improved by 0.294214
iteration 143
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.443
ELB improved by 0.327959
iteration 144
Updating parameters of variational distributions...
Calculating ELB..
ELB=-415.117
ELB improved by 0.325307
iteration 145
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.837
ELB improved by 0.280308
iteration 146
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.624
ELB improved by 0.213372
iteration 147
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.474
ELB improved by 0.149921
iteration 148
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.372
ELB improved by 0.102135
iteration 149
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.302
ELB improved by 0.0693104
iteration 150
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.255
ELB improved by 0.0472678
iteration 151
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.222
ELB improved by 0.0326342
iteration 152
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.199
ELB improved by 0.0230818
iteration 153
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.182
ELB improved by 0.0169388
iteration 154
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.169
ELB improved by 0.0130015
iteration 155
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.159
ELB improved by 0.0104453
iteration 156
Updating parameters of variational distributions...
Calculating ELB..
ELB=-414.15
ELB improved by 0.00873738
ELB converged
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 24 ]
>
> proc.time()
user system elapsed
1.071 0.080 1.150
graper.Rcheck/graper-Ex.timings
| name | user | system | elapsed | |
| coef.graper | 0.028 | 0.006 | 0.034 | |
| getPIPs | 0.027 | 0.004 | 0.031 | |
| graper | 0.043 | 0.006 | 0.050 | |
| makeExampleData | 0.004 | 0.000 | 0.004 | |
| makeExampleDataWithUnequalGroups | 0.005 | 0.001 | 0.004 | |
| plotELBO | 0.120 | 0.006 | 0.131 | |
| plotGroupPenalties | 0.329 | 0.005 | 0.334 | |
| plotPosterior | 0.250 | 0.006 | 0.257 | |
| predict.graper | 1.015 | 0.027 | 1.044 | |
| print.graper | 0.026 | 0.004 | 0.031 | |