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This page was generated on 2024-12-07 15:24 -0500 (Sat, 07 Dec 2024).

HostnameOSArch (*)R versionInstalled pkgs
teran2Linux (Ubuntu 24.04.1 LTS)x86_64R Under development (unstable) (2024-11-14 r87333) -- "Unsuffered Consequences" 861
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Package 144/216HostnameOS / ArchINSTALLBUILDCHECK
MSnbase 2.33.2  (landing page)
Laurent Gatto
Snapshot Date: 2024-12-07 12:00 -0500 (Sat, 07 Dec 2024)
git_url: https://git.bioconductor.org/packages/MSnbase
git_branch: devel
git_last_commit: 7fad86f
git_last_commit_date: 2024-11-12 03:09:21 -0500 (Tue, 12 Nov 2024)
teran2Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    OK    ERROR  


CHECK results for MSnbase on teran2

To the developers/maintainers of the MSnbase package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: MSnbase
Version: 2.33.2
Command: /home/rapidbuild/bbs-3.21-bioc-rapid/R/bin/R CMD check --install=check:MSnbase.install-out.txt --library=/home/rapidbuild/bbs-3.21-bioc-rapid/R/site-library --timings MSnbase_2.33.2.tar.gz
StartedAt: 2024-12-07 14:44:40 -0500 (Sat, 07 Dec 2024)
EndedAt: 2024-12-07 14:44:43 -0500 (Sat, 07 Dec 2024)
EllapsedTime: 3.0 seconds
RetCode: 1
Status:   ERROR  
CheckDir: MSnbase.Rcheck
Warnings: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/rapidbuild/bbs-3.21-bioc-rapid/R/bin/R CMD check --install=check:MSnbase.install-out.txt --library=/home/rapidbuild/bbs-3.21-bioc-rapid/R/site-library --timings MSnbase_2.33.2.tar.gz
###
##############################################################################
##############################################################################


* using log directory ‘/media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/meat/MSnbase.Rcheck’
* using R Under development (unstable) (2024-11-14 r87333)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    gcc (Ubuntu 13.2.0-23ubuntu4) 13.2.0
    GNU Fortran (Ubuntu 13.2.0-23ubuntu4) 13.2.0
* running under: Ubuntu 24.04.1 LTS
* using session charset: UTF-8
* checking for file ‘MSnbase/DESCRIPTION’ ... OK
* this is package ‘MSnbase’ version ‘2.33.2’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... ERROR
Package suggested but not available: ‘rols’

The suggested packages are required for a complete check.
Checking can be attempted without them by setting the environment
variable _R_CHECK_FORCE_SUGGESTS_ to a false value.

See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE

Status: 1 ERROR
See
  ‘/media/volume/teran2_disk/rapidbuild/bbs-3.21-bioc-rapid/meat/MSnbase.Rcheck/00check.log’
for details.


Installation output


Tests output


Example timings