| Back to Rapid builds (Linux only) of a subset of BioC 3.21 Report updated every 6 hours |
This page was generated on 2025-04-01 18:16 -0400 (Tue, 01 Apr 2025).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| teran2 | Linux (Ubuntu 24.04.1 LTS) | x86_64 | R Under development (unstable) (2025-01-20 r87609) -- "Unsuffered Consequences" | 871 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 145/217 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | |||||||
| MSnbase 2.33.4 (landing page) Laurent Gatto
| teran2 | Linux (Ubuntu 24.04.1 LTS) / x86_64 | ERROR | ERROR | skipped | |||||||
|
To the developers/maintainers of the MSnbase package: - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: MSnbase |
| Version: 2.33.4 |
| Command: /home/rapidbuild/bbs-3.21-bioc-rapid/R/bin/R CMD build --keep-empty-dirs --no-resave-data MSnbase |
| StartedAt: 2025-04-01 18:14:59 -0400 (Tue, 01 Apr 2025) |
| EndedAt: 2025-04-01 18:15:00 -0400 (Tue, 01 Apr 2025) |
| EllapsedTime: 0.6 seconds |
| RetCode: 1 |
| Status: ERROR |
| PackageFile: None |
| PackageFileSize: NA |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/rapidbuild/bbs-3.21-bioc-rapid/R/bin/R CMD build --keep-empty-dirs --no-resave-data MSnbase ### ############################################################################## ############################################################################## * checking for file ‘MSnbase/DESCRIPTION’ ... OK cp: error writing '/tmp/RtmpPQzOhQ/Rbuild2cca5f58103164/MSnbase/R/map.R': No space left on device cp: error writing '/tmp/RtmpPQzOhQ/Rbuild2cca5f58103164/MSnbase/R/matching.R': No space left on device cp: error writing '/tmp/RtmpPQzOhQ/Rbuild2cca5f58103164/MSnbase/R/methods-Chromatogram.R': No space left on device cp: error writing '/tmp/RtmpPQzOhQ/Rbuild2cca5f58103164/MSnbase/R/methods-MChromatograms.R': No space left on device cp: error writing '/tmp/RtmpPQzOhQ/Rbuild2cca5f58103164/MSnbase/R/methods-MIAPE.R': No space left on device cp: error writing '/tmp/RtmpPQzOhQ/Rbuild2cca5f58103164/MSnbase/R/methods-MSnExp.R': No space left on device cp: error writing '/tmp/RtmpPQzOhQ/Rbuild2cca5f58103164/MSnbase/R/methods-MSnProcess.R': No space left on device cp: error writing '/tmp/RtmpPQzOhQ/Rbuild2cca5f58103164/MSnbase/R/methods-MSnSet.R': No space left on device cp: error writing '/tmp/RtmpPQzOhQ/Rbuild2cca5f58103164/MSnbase/R/methods-MSnSetList.R': No space left on device cp: error writing '/tmp/RtmpPQzOhQ/Rbuild2cca5f58103164/MSnbase/R/methods-MSpectra.R': No space left on device cp: error writing '/tmp/RtmpPQzOhQ/Rbuild2cca5f58103164/MSnbase/R/methods-OnDiskMSnExp.R': No space left on device cp: error writing '/tmp/RtmpPQzOhQ/Rbuild2cca5f58103164/MSnbase/R/methods-ReporterIons.R': No space left on device cp: error writing '/tmp/RtmpPQzOhQ/Rbuild2cca5f58103164/MSnbase/R/methods-Spectrum.R': No space left on device cp: error writing '/tmp/RtmpPQzOhQ/Rbuild2cca5f58103164/MSnbase/R/methods-Spectrum1.R': No space left on device cp: error writing '/tmp/RtmpPQzOhQ/Rbuild2cca5f58103164/MSnbase/R/methods-Spectrum2.R': No space left on device cp: error writing '/tmp/RtmpPQzOhQ/Rbuild2cca5f58103164/MSnbase/R/methods-all.equal.R': No space left on device cp: error writing '/tmp/RtmpPQzOhQ/Rbuild2cca5f58103164/MSnbase/R/methods-filters.R': No space left on device cp: error writing '/tmp/RtmpPQzOhQ/Rbuild2cca5f58103164/MSnbase/R/methods-fragments.R': No space left on device cp: error writing '/tmp/RtmpPQzOhQ/Rbuild2cca5f58103164/MSnbase/R/methods-mzR.R': No space left on device cp: error writing '/tmp/RtmpPQzOhQ/Rbuild2cca5f58103164/MSnbase/R/methods-other.R': No space left on device cp: error writing '/tmp/RtmpPQzOhQ/Rbuild2cca5f58103164/MSnbase/R/methods-pSet.R': No space left on device cp: error writing '/tmp/RtmpPQzOhQ/Rbuild2cca5f58103164/MSnbase/R/methods-updateObjectTo.R': No space left on device cp: error writing '/tmp/RtmpPQzOhQ/Rbuild2cca5f58103164/MSnbase/R/methods-write.R': No space left on device cp: error writing '/tmp/RtmpPQzOhQ/Rbuild2cca5f58103164/MSnbase/R/missing-data.R': No space left on device cp: error writing '/tmp/RtmpPQzOhQ/Rbuild2cca5f58103164/MSnbase/R/nadata.R': No space left on device cp: error writing '/tmp/RtmpPQzOhQ/Rbuild2cca5f58103164/MSnbase/R/options.R': No space left on device cp: error writing '/tmp/RtmpPQzOhQ/Rbuild2cca5f58103164/MSnbase/R/plotting-MSnExp.R': No space left on device cp: error writing '/tmp/RtmpPQzOhQ/Rbuild2cca5f58103164/MSnbase/R/plotting-MSnSet.R': No space left on device cp: error writing '/tmp/RtmpPQzOhQ/Rbuild2cca5f58103164/MSnbase/R/plotting-Spectrum.R': No space left on device cp: error writing '/tmp/RtmpPQzOhQ/Rbuild2cca5f58103164/MSnbase/R/plotting-Spectrum1.R': No space left on device cp: error writing '/tmp/RtmpPQzOhQ/Rbuild2cca5f58103164/MSnbase/R/plotting-Spectrum2.R': No space left on device cp: error writing '/tmp/RtmpPQzOhQ/Rbuild2cca5f58103164/MSnbase/R/plotting-dataframe.R': No space left on device cp: error writing '/tmp/RtmpPQzOhQ/Rbuild2cca5f58103164/MSnbase/R/quantitation-MS2-labelfree.R': No space left on device cp: error writing '/tmp/RtmpPQzOhQ/Rbuild2cca5f58103164/MSnbase/R/readChromData.R': No space left on device cp: error writing '/tmp/RtmpPQzOhQ/Rbuild2cca5f58103164/MSnbase/R/readMSData.R': No space left on device cp: error writing '/tmp/RtmpPQzOhQ/Rbuild2cca5f58103164/MSnbase/R/readMSData2.R': No space left on device cp: error writing '/tmp/RtmpPQzOhQ/Rbuild2cca5f58103164/MSnbase/R/readMSnSet.R': No space left on device cp: error writing '/tmp/RtmpPQzOhQ/Rbuild2cca5f58103164/MSnbase/R/readMzXMLData.R': No space left on device cp: error writing '/tmp/RtmpPQzOhQ/Rbuild2cca5f58103164/MSnbase/R/readWriteMgfData.R': No space left on device cp: error writing '/tmp/RtmpPQzOhQ/Rbuild2cca5f58103164/MSnbase/R/readWriteMzTab.R': No space left on device cp: error writing '/tmp/RtmpPQzOhQ/Rbuild2cca5f58103164/MSnbase/R/utils.R': No space left on device cp: error writing '/tmp/RtmpPQzOhQ/Rbuild2cca5f58103164/MSnbase/R/writeMSData.R': No space left on device cp: error writing '/tmp/RtmpPQzOhQ/Rbuild2cca5f58103164/MSnbase/R/zzz.R': No space left on device cp: cannot create directory '/tmp/RtmpPQzOhQ/Rbuild2cca5f58103164/MSnbase/data': No space left on device cp: cannot create directory '/tmp/RtmpPQzOhQ/Rbuild2cca5f58103164/MSnbase/inst': No space left on device cp: cannot create directory '/tmp/RtmpPQzOhQ/Rbuild2cca5f58103164/MSnbase/man': No space left on device cp: cannot create directory '/tmp/RtmpPQzOhQ/Rbuild2cca5f58103164/MSnbase/pkgdown': No space left on device cp: cannot create directory '/tmp/RtmpPQzOhQ/Rbuild2cca5f58103164/MSnbase/src': No space left on device cp: cannot create directory '/tmp/RtmpPQzOhQ/Rbuild2cca5f58103164/MSnbase/tests': No space left on device cp: error writing '/tmp/RtmpPQzOhQ/Rbuild2cca5f58103164/MSnbase/vignettes/Figures/MSnbase-io-out.tex': No space left on device cp: error writing '/tmp/RtmpPQzOhQ/Rbuild2cca5f58103164/MSnbase/vignettes/Figures/Makefile': No space left on device cp: error writing '/tmp/RtmpPQzOhQ/Rbuild2cca5f58103164/MSnbase/vignettes/Figures/itraqchem.pdf': No space left on device cp: error writing '/tmp/RtmpPQzOhQ/Rbuild2cca5f58103164/MSnbase/vignettes/Figures/itraqchem.png': No space left on device cp: error writing '/tmp/RtmpPQzOhQ/Rbuild2cca5f58103164/MSnbase/vignettes/Figures/msnset.png': No space left on device cp: error writing '/tmp/RtmpPQzOhQ/Rbuild2cca5f58103164/MSnbase/vignettes/Figures/plot2d-figure.png': No space left on device cp: error writing '/tmp/RtmpPQzOhQ/Rbuild2cca5f58103164/MSnbase/vignettes/Figures/plotDensity-figure.png': No space left on device cp: error writing '/tmp/RtmpPQzOhQ/Rbuild2cca5f58103164/MSnbase/vignettes/Figures/plotMzDelta-pride12011.pdf': No space left on device cp: error writing '/tmp/RtmpPQzOhQ/Rbuild2cca5f58103164/MSnbase/vignettes/Figures/plotMzDelta-pride12011.png': No space left on device cp: error writing '/tmp/RtmpPQzOhQ/Rbuild2cca5f58103164/MSnbase/vignettes/Figures/tmt10comp.pdf': No space left on device cp: error writing '/tmp/RtmpPQzOhQ/Rbuild2cca5f58103164/MSnbase/vignettes/Figures/tmt10comp.png': No space left on device cp: error writing '/tmp/RtmpPQzOhQ/Rbuild2cca5f58103164/MSnbase/vignettes/Bugs.md': No space left on device cp: error writing '/tmp/RtmpPQzOhQ/Rbuild2cca5f58103164/MSnbase/vignettes/Foreword.md': No space left on device cp: error writing '/tmp/RtmpPQzOhQ/Rbuild2cca5f58103164/MSnbase/vignettes/MSnbase.bib': No space left on device cp: error writing '/tmp/RtmpPQzOhQ/Rbuild2cca5f58103164/MSnbase/vignettes/v01-MSnbase-demo.Rmd': No space left on device cp: error writing '/tmp/RtmpPQzOhQ/Rbuild2cca5f58103164/MSnbase/vignettes/v02-MSnbase-io.Rmd': No space left on device cp: error writing '/tmp/RtmpPQzOhQ/Rbuild2cca5f58103164/MSnbase/vignettes/v03-MSnbase-centroiding.Rmd': No space left on device cp: error writing '/tmp/RtmpPQzOhQ/Rbuild2cca5f58103164/MSnbase/vignettes/v04-benchmarking.Rmd': No space left on device cp: error writing '/tmp/RtmpPQzOhQ/Rbuild2cca5f58103164/MSnbase/vignettes/v05-MSnbase-development.Rmd': No space left on device cp: error writing '/tmp/RtmpPQzOhQ/Rbuild2cca5f58103164/MSnbase/.Rbuildignore': No space left on device cp: error writing '/tmp/RtmpPQzOhQ/Rbuild2cca5f58103164/MSnbase/.Rinstignore': No space left on device cp: error writing '/tmp/RtmpPQzOhQ/Rbuild2cca5f58103164/MSnbase/.editorconfig': No space left on device cp: error writing '/tmp/RtmpPQzOhQ/Rbuild2cca5f58103164/MSnbase/.gitignore': No space left on device cp: error writing '/tmp/RtmpPQzOhQ/Rbuild2cca5f58103164/MSnbase/CONDUCT.md': No space left on device cp: error writing '/tmp/RtmpPQzOhQ/Rbuild2cca5f58103164/MSnbase/NAMESPACE': No space left on device cp: error writing '/tmp/RtmpPQzOhQ/Rbuild2cca5f58103164/MSnbase/README.md': No space left on device ERROR copying to build directory failed