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BioC 3.2: INSTALL report for fabia on moscato1

This page was generated on 2016-04-23 10:17:20 -0700 (Sat, 23 Apr 2016).

Package 332/1103HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
fabia 2.16.0
Sepp Hochreiter
Snapshot Date: 2016-04-22 16:20:12 -0700 (Fri, 22 Apr 2016)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_3_2/madman/Rpacks/fabia
Last Changed Rev: 109589 / Revision: 116712
Last Changed Date: 2015-10-13 12:36:05 -0700 (Tue, 13 Oct 2015)
zin1 Linux (Ubuntu 14.04.2 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
moscato1 Windows Server 2008 R2 Standard (64-bit) / x64 [ OK ] OK  OK  OK UNNEEDED, same version exists in internal repository
oaxaca Mac OS X Mavericks (10.9.5) / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: fabia
Version: 2.16.0
Command: rm -rf fabia.buildbin-libdir && mkdir fabia.buildbin-libdir && C:\cygwin\bin\curl.exe -O http://zin1/BBS/3.2/bioc/src/contrib/fabia_2.16.0.tar.gz && D:\biocbld\bbs-3.2-bioc\R\bin\R.exe CMD INSTALL --build --library=fabia.buildbin-libdir --merge-multiarch fabia_2.16.0.tar.gz && D:\biocbld\bbs-3.2-bioc\R\bin\R.exe CMD INSTALL fabia_2.16.0.zip && rm fabia_2.16.0.tar.gz fabia_2.16.0.zip
StartedAt: 2016-04-22 17:49:02 -0700 (Fri, 22 Apr 2016)
EndedAt: 2016-04-22 17:50:32 -0700 (Fri, 22 Apr 2016)
EllapsedTime: 90.6 seconds
RetCode: 0
Status:  OK  

Command output

##############################################################################
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###
### Running command:
###
###   rm -rf fabia.buildbin-libdir && mkdir fabia.buildbin-libdir  && C:\cygwin\bin\curl.exe -O http://zin1/BBS/3.2/bioc/src/contrib/fabia_2.16.0.tar.gz && D:\biocbld\bbs-3.2-bioc\R\bin\R.exe CMD INSTALL --build --library=fabia.buildbin-libdir --merge-multiarch fabia_2.16.0.tar.gz && D:\biocbld\bbs-3.2-bioc\R\bin\R.exe CMD INSTALL fabia_2.16.0.zip  && rm fabia_2.16.0.tar.gz fabia_2.16.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
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  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100  228k  100  228k    0     0  13.9M      0 --:--:-- --:--:-- --:--:-- 20.3M

install for i386

* installing *source* package 'fabia' ...
** libs
  running 'src/Makefile.win' ...
rm -f fabia.o fabia.dll *.a *.o *.so *.dll
gcc -m32 -c fabiac.c -o fabia.o -I"D:/biocbld/BBS-3˜1.2-B/R/include" -Wall -O3
gcc -m32 -shared -s -static-libgcc fabia.o -L"D:/biocbld/BBS-3˜1.2-B/R/bin/i386"  -lR  -o fabia.dll 
rm -f fabia.o *.a *.o *.so
installing to D:/biocbld/bbs-3.2-bioc/meat/fabia.buildbin-libdir/fabia/libs/i386
** R
** demo
** inst
** preparing package for lazy loading
Creating a generic function for 'summary' from package 'base' in package 'fabia'
Creating a generic function for 'plot' from package 'graphics' in package 'fabia'
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded

install for x64

* installing *source* package 'fabia' ...
** libs
  running 'src/Makefile.win' ...
rm -f fabia.o fabia.dll *.a *.o *.so *.dll
gcc -m64 -c fabiac.c -o fabia.o -I"D:/biocbld/BBS-3˜1.2-B/R/include" -Wall -O3
gcc -m64 -shared -s -static-libgcc fabia.o -L"D:/biocbld/BBS-3˜1.2-B/R/bin/x64"  -lR  -o fabia.dll 
rm -f fabia.o *.a *.o *.so
installing to D:/biocbld/bbs-3.2-bioc/meat/fabia.buildbin-libdir/fabia/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'fabia' as fabia_2.16.0.zip
* DONE (fabia)
* installing to library 'D:/biocbld/bbs-3.2-bioc/R/library'
package 'fabia' successfully unpacked and MD5 sums checked