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INSTALL report for STATegRa on tokay2

This page was generated on 2020-10-17 11:57:52 -0400 (Sat, 17 Oct 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE STATegRa PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 1744/1905HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
STATegRa 1.24.0
David Gomez-Cabrero , NĂºria Planell
Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020)
URL: https://git.bioconductor.org/packages/STATegRa
Branch: RELEASE_3_11
Last Commit: 3250fa3
Last Changed Date: 2020-04-27 14:44:41 -0400 (Mon, 27 Apr 2020)
malbec2 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  OK UNNEEDED, same version exists in internal repository
tokay2 Windows Server 2012 R2 Standard / x64 [ OK ] OK  OK  NA 
machv2 macOS 10.14.6 Mojave / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: STATegRa
Version: 1.24.0
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/STATegRa_1.24.0.tar.gz && rm -rf STATegRa.buildbin-libdir && mkdir STATegRa.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=STATegRa.buildbin-libdir STATegRa_1.24.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL STATegRa_1.24.0.zip && rm STATegRa_1.24.0.tar.gz STATegRa_1.24.0.zip
StartedAt: 2020-10-16 17:21:29 -0400 (Fri, 16 Oct 2020)
EndedAt: 2020-10-16 17:22:48 -0400 (Fri, 16 Oct 2020)
EllapsedTime: 79.2 seconds
RetCode: 0
Status:  OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc/src/contrib/STATegRa_1.24.0.tar.gz && rm -rf STATegRa.buildbin-libdir && mkdir STATegRa.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=STATegRa.buildbin-libdir STATegRa_1.24.0.tar.gz && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL STATegRa_1.24.0.zip && rm STATegRa_1.24.0.tar.gz STATegRa_1.24.0.zip
###
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  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
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  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 3176k  100 3176k    0     0  30.3M      0 --:--:-- --:--:-- --:--:-- 32.6M

install for i386

* installing *source* package 'STATegRa' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'STATegRa'
    finding HTML links ... done
    STATegRa-defunct                        html  
    STATegRa                                html  
    STATegRaUsersGuide                      html  
    STATegRa_data                           html  
    STATegRa_data_TCGA_BRCA                 html  
    bioDist                                 html  
    bioDistFeature                          html  
    bioDistFeaturePlot                      html  
    bioDistW                                html  
    bioDistWPlot                            html  
    bioDistclass                            html  
    bioMap                                  html  
    caClass-class                           html  
    combiningMappings                       html  
    createOmicsExpressionSet                html  
    getInitialData                          html  
    getLoadings                             html  
    getMethodInfo                           html  
    getPreprocessing                        html  
    getScores                               html  
    getVAF                                  html  
    holistOmics                             html  
    modelSelection                          html  
    finding level-2 HTML links ... done

    omicsCompAnalysis                       html  
    omicsNPC                                html  
    plotRes                                 html  
    plotVAF                                 html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'STATegRa' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'STATegRa' as STATegRa_1.24.0.zip
* DONE (STATegRa)
* installing to library 'C:/Users/biocbuild/bbs-3.11-bioc/R/library'
package 'STATegRa' successfully unpacked and MD5 sums checked