BiocParallel 0.6.1
Bioconductor Package Maintainer
| Snapshot Date: 2014-10-07 17:20:37 -0700 (Tue, 07 Oct 2014) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_14/madman/Rpacks/BiocParallel | | Last Changed Rev: 90584 / Revision: 95116 | | Last Changed Date: 2014-05-21 05:37:46 -0700 (Wed, 21 May 2014) |
| zin2 | Linux (Ubuntu 12.04.4 LTS) / x86_64 | OK | OK | OK | |
| moscato2 | Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64 | OK | OK | OK | OK |
| petty | Mac OS X Snow Leopard (10.6.8) / x86_64 | OK | OK | OK | OK |
| morelia | Mac OS X Mavericks (10.9.5) / x86_64 | OK | [ OK ] | OK | OK |
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### Running command:
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### /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data BiocParallel
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* checking for file ‘BiocParallel/DESCRIPTION’ ... OK
* preparing ‘BiocParallel’:
* checking DESCRIPTION meta-information ... OK
* installing the package to process help pages
* building the PDF package manual
Hmm ... looks like a package
Converting Rd files to LaTeX .
Creating pdf output from LaTeX ...
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[]\T1/fi4/m/n/10 logical(1)\T1/ptm/m/n/10 Flag to de-ter-mine in apply-like fun
c-tions (see e.g. [][]\T1/fi4/m/n/10 bplapply[][][]\T1/ptm/m/n/10 ) whether
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[]\T1/fi4/m/n/10 logical(1)\T1/ptm/m/n/10 BatchJobs cre-ates tem-po-rary di-rec
-to-ries in the \T1/fi4/m/n/10 work.dir\T1/ptm/m/n/10 . If \T1/fi4/m/n/10 clean
up
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[]\T1/ptm/m/n/10 See \T1/fi4/m/n/10 showMethods{bplapply} \T1/ptm/m/n/10 for ad
-di-tional meth-ods, e.g., \T1/fi4/m/n/10 method?bplapply("MulticoreParam")\T1/
ptm/m/n/10 .
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[]\T1/ptm/m/n/10 See \T1/fi4/m/n/10 showMethods{bplapply} \T1/ptm/m/n/10 for ad
-di-tional meth-ods, e.g., \T1/fi4/m/n/10 method?bplapply("MulticoreParam")\T1/
ptm/m/n/10 .
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[]\T1/fi4/m/n/10 logical(1)\T1/ptm/m/n/10 Flag to de-ter-mine in apply-like fun
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[]\T1/fi4/m/n/10 logical(1) \T1/ptm/m/n/10 in-di-cat-ing whether forked chil-dr
en will be ter-mi-nated be-fore \T1/fi4/m/n/10 bplapply
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[]\T1/ptm/m/n/10 Make this the de-fault \T1/fi4/m/n/10 BiocParallelParam \T1/pt
m/m/n/10 for sub-se-quent eval-u-a-tions? If \T1/fi4/m/n/10 FALSE\T1/ptm/m/n/10
,
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\T1/fi4/m/n/10 registered(bpparamClass)\T1/ptm/m/n/10 . If \T1/fi4/m/n/10 bppar
amClass \T1/ptm/m/n/10 is miss-ing, use \T1/fi4/m/n/10 name <- names(registered
())[1]\T1/ptm/m/n/10 .
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[]\T1/ptm/m/n/10 Use \T1/fi4/m/n/10 as(cl, "SnowParam") \T1/ptm/m/n/10 to co-er
ce a clus-ter cre-ated di-rectly by \T1/fi4/m/n/10 parallel::param \T1/ptm/m/n/
10 to a \T1/fi4/m/n/10 SnowParam
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[]\T1/fi4/m/n/10 logical(1)\T1/ptm/m/n/10 Flag to de-ter-mine in apply-like fun
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[]\T1/fi4/m/n/10 logical(1)\T1/ptm/m/n/10 BatchJobs cre-ates tem-po-rary di-rec
-to-ries in the \T1/fi4/m/n/10 work.dir\T1/ptm/m/n/10 . If \T1/fi4/m/n/10 clean
up
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[]\T1/ptm/m/n/10 See \T1/fi4/m/n/10 showMethods{bplapply} \T1/ptm/m/n/10 for ad
-di-tional meth-ods, e.g., \T1/fi4/m/n/10 method?bplapply("MulticoreParam")\T1/
ptm/m/n/10 .
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[]\T1/ptm/m/n/10 See \T1/fi4/m/n/10 showMethods{bplapply} \T1/ptm/m/n/10 for ad
-di-tional meth-ods, e.g., \T1/fi4/m/n/10 method?bplapply("MulticoreParam")\T1/
ptm/m/n/10 .
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[]\T1/fi4/m/n/10 logical(1)\T1/ptm/m/n/10 Flag to de-ter-mine in apply-like fun
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[]\T1/fi4/m/n/10 logical(1) \T1/ptm/m/n/10 in-di-cat-ing whether forked chil-dr
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[]\T1/ptm/m/n/10 Make this the de-fault \T1/fi4/m/n/10 BiocParallelParam \T1/pt
m/m/n/10 for sub-se-quent eval-u-a-tions? If \T1/fi4/m/n/10 FALSE\T1/ptm/m/n/10
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