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Package 530/658HostnameOS / ArchBUILDCHECKBUILD BIN
ReportingTools 1.99.3
Jason A. Hackney , Gabriel Becker
Snapshot Date: 2013-03-24 17:01:43 -0700 (Sun, 24 Mar 2013)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/ReportingTools
Last Changed Rev: 74740 / Revision: 74774
Last Changed Date: 2013-03-23 06:30:49 -0700 (Sat, 23 Mar 2013)
george2 Linux (Ubuntu 12.04.1 LTS) / x86_64  OK  OK 
moscato2 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK  OK  OK 
petty Mac OS X Leopard (10.5.8) / i386  OK  OK [ OK ]

Summary

Package: ReportingTools
Version: 1.99.3
Command: rm -rf ReportingTools.buildbin-libdir && mkdir ReportingTools.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh ReportingTools_1.99.3.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R ReportingTools.buildbin-libdir
StartedAt: 2013-03-25 05:39:32 -0700 (Mon, 25 Mar 2013)
EndedAt: 2013-03-25 05:40:29 -0700 (Mon, 25 Mar 2013)
EllapsedTime: 57.3 seconds
RetCode: 0
Status:  OK 
PackageFile: ReportingTools_1.99.3.tgz
PackageFileSize: 1.979 MiB

Command output

>>>>>>> 
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=ReportingTools.buildbin-libdir ReportingTools_1.99.3.tar.gz'
>>>>>>> 

* installing *source* package 'ReportingTools' ...
** R
** data
** inst
** byte-compile and prepare package for lazy loading
in method for 'objectToHTML' with signature 'object="trellis"': no definition for class "trellis"
in method for 'objectToHTML' with signature 'object="ggplot"': no definition for class "ggplot"
No methods found in "GenomicRanges" for requests: summary
in method for 'publish' with signature 'object="trellis",publicationType="HTMLReport"': no definition for class "trellis"
Note: no visible binding for '<<-' assignment to '.->.basePath' 
Note: no visible binding for '<<-' assignment to '.->.handlers' 
Note: no visible binding for '<<-' assignment to '.->.report' 
Note: no visible binding for '<<-' assignment to '.->.reportDirectory' 
Note: no visible binding for '<<-' assignment to '.->.shortName' 
Note: no visible binding for '<<-' assignment to '.->.title' 
Note: no visible binding for '<<-' assignment to '.reportDirectory' 
Note: no visible binding for '<<-' assignment to '.->.basePath' 
Note: no visible binding for '<<-' assignment to '.->.handlers' 
Note: no visible binding for '<<-' assignment to '.->.modifyDF' 
Note: no visible binding for '<<-' assignment to '.->.report' 
Note: no visible binding for '<<-' assignment to '.->.reportDirectory' 
Note: no visible binding for '<<-' assignment to '.->.shortName' 
Note: no visible binding for '<<-' assignment to '.->.title' 
Note: no visible binding for '<<-' assignment to '.->.toDF' 
Note: no visible binding for '<<-' assignment to '.->.toHTML' 
Note: no visible binding for '<<-' assignment to '.reportDirectory' 
** help
*** installing help indices
** building package indices
** installing vignettes
   'basicReportingTools.Rnw' 
   'knitr.Rmd' 
processing file: knitr.Rmd
output file: /Users/biocbuild/bbs-2.12-bioc/meat/ReportingTools.buildbin-libdir/ReportingTools/doc/knitr.R
   'microarrayAnalysis.Rnw' 
   'rnaseqAnalysis.Rnw' 
   'shiny.Rnw' 
** testing if installed package can be loaded
No methods found in "GenomicRanges" for requests: summary
* DONE (ReportingTools)