PWMEnrich 1.2.0
Robert Stojnic
| Snapshot Date: 2013-03-24 16:21:20 -0700 (Sun, 24 Mar 2013) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_11/madman/Rpacks/PWMEnrich | | Last Changed Rev: 70050 / Revision: 74773 | | Last Changed Date: 2012-10-01 15:16:24 -0700 (Mon, 01 Oct 2012) |
| lamb1 | Linux (openSUSE 12.1) / x86_64 | [ ERROR ] | skipped | |
| moscato1 | Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64 | ERROR | skipped | skipped |
| perceval | Mac OS X Leopard (10.5.8) / i386 | ERROR | skipped | skipped |
* checking for file ‘PWMEnrich/DESCRIPTION’ ... OK
* preparing ‘PWMEnrich’:
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
* creating vignettes ... ERROR
Loading required package: Biostrings
Loading required package: BiocGenerics
Attaching package: ‘BiocGenerics’
The following object(s) are masked from ‘package:stats’:
xtabs
The following object(s) are masked from ‘package:base’:
Filter, Find, Map, Position, Reduce, anyDuplicated, cbind,
colnames, duplicated, eval, get, intersect, lapply, mapply, mget,
order, paste, pmax, pmax.int, pmin, pmin.int, rbind, rep.int,
rownames, sapply, setdiff, table, tapply, union, unique
Loading required package: IRanges
Loading required package: grid
Warning in data(PWMLogn.dm3.jaspar.insects) :
data set ‘PWMLogn.dm3.jaspar.insects’ not found
Warning: ‘read.DNAStringSet’ is deprecated.
Use ‘readDNAStringSet’ instead.
See help("Deprecated")
Error: processing vignette ‘PWMEnrich.Rnw’ failed with diagnostics:
chunk 1 (label = simple)
Error in motifEnrichment(sequences, PWMLogn.dm3.jaspar.insects) :
object ‘PWMLogn.dm3.jaspar.insects’ not found
Execution halted