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Package 107/234 | Hostname | OS | Arch | BUILD | CHECK | BUILD BIN |
iSNetwork 1.8.0 Elizabeth Whalen Last Changed Date: 2007-10-02 17:41:09 -0700 Last Changed Rev: 27709 | lamb1 | Linux (SUSE 10.1) | x86_64 | OK | WARNINGS | |
wellington | Linux (SUSE 9.2) | i686 | [ ERROR ] | skipped | ||
liverpool | Windows Server 2003 R2 (32-bit) | x64 | N O T S U P P O R T E D | |||
pitt | Mac OS X (10.4.10) | i386 | OK | OK | OK |
Package: iSNetwork |
Version: 1.8.0 |
Command: /loc/biocbuild/bbs-2.1-bioc/R/bin/R CMD build iSNetwork |
RetCode: 1 |
Time: 6.9 seconds |
Status: ERROR |
PackageFile: None |
* checking for file 'iSNetwork/DESCRIPTION' ... OK * preparing 'iSNetwork': * checking DESCRIPTION meta-information ... OK * installing the package to re-build vignettes * Installing *source* package 'iSNetwork' ... ** R ** inst ** preparing package for lazy loading Loading required package: graph Loading required package: Rgraphviz Loading required package: RGtk *** caught segfault *** address (nil), cause 'memory not mapped' Traceback: 1: dyn.load(file, ...) 2: library.dynam("RGtk", pkgname, libname) 3: f(libname, pkgname) 4: firstlib(which.lib.loc, package) 5: doTryCatch(return(expr), name, parentenv, handler) 6: tryCatchOne(expr, names, parentenv, handlers[[1]]) 7: tryCatchList(expr, classes, parentenv, handlers) 8: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1]], quote(doTryCatch))) call <- sys.call(-4) dcall <- deparse(call)[1] prefix <- paste("Error in", dcall, ": ") LONG <- 75 msg <- conditionMessage(e) sm <- strsplit(msg, "\n")[[1]] if (14 + nchar(dcall, type = "w") + nchar(sm[1], type = "w") > LONG) prefix <- paste(prefix, "\n ", sep = "") } else prefix <- "Error : " msg <- paste(prefix, conditionMessage(e), "\n", sep = "") .Internal(seterrmessage(msg[1])) if (!silent && identical(getOption("show.error.messages"), TRUE)) { cat(msg, file = stderr()) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error"))}) 9: try(firstlib(which.lib.loc, package)) 10: library(pkg, character.only = TRUE, logical.return = TRUE, lib.loc = lib.loc) 11: .getRequiredPackages2(pkgInfo, quietly, , useImports) 12: .getRequiredPackages() aborting ... /loc/biocbuild/bbs-2.1-bioc/R/bin/INSTALL: line 465: 14308 Done ( echo "options(warn=1); invisible(.libPaths(c(\"${lib}\", .libPaths()))); .getRequiredPackages(); tools:::makeLazyLoading(\"${R_PACKAGE_NAME}\", \"${lib}\")" ) 14309 Segmentation fault | R_DEFAULT_PACKAGES= LC_ALL=C "${R_EXE}" --vanilla --slave ERROR: lazy loading failed for package 'iSNetwork' ** Removing '/tmp/Rinst1414782867/iSNetwork' ERROR Installation failed. Removing '/tmp/Rinst1414782867'