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IMPORTANT NOTE: R was configured with --enable-strict-barrier on lamb1 |
Package 97/247 | Hostname | OS | Arch | BUILD | CHECK | BUILD BIN |
GLAD1.11.0Philippe HupeLast Changed Date: 2007-06-19 10:08:17 -0700 Last Changed Rev: 25475 | lamb1 | Linux (SUSE 10.1) | x86_64 | OK | OK | |
wellington | Linux (SUSE 9.2) | i686 | [ OK ] | OK | ||
liverpool | Windows Server 2003 R2 (32-bit) | x64 | OK | OK | OK | |
pitt | Mac OS X (10.4.10) | i386 | OK | OK | OK |
Package: GLAD |
Version: 1.11.0 |
Command: /loc/biocbuild/bbs-2.1-bioc/R/bin/R CMD build GLAD |
RetCode: 0 |
Time: 51.5 seconds |
Status: OK |
PackageFile: GLAD_1.11.0.tar.gz |
* checking for file 'GLAD/DESCRIPTION' ... OK * preparing 'GLAD': * checking DESCRIPTION meta-information ... OK * cleaning src * checking whether 'INDEX' is up-to-date ... OK * installing the package to re-build vignettes * Installing *source* package 'GLAD' ... Configuring variable environment ** libs gcc -std=gnu99 -I/loc/biocbuild/bbs-2.1-bioc/R/include -I/loc/biocbuild/bbs-2.1-bioc/R/include -I/usr/local/include -fpic -g -O2 -Wall -c distance.c -o distance.o g++ -I/loc/biocbuild/bbs-2.1-bioc/R/include -I/loc/biocbuild/bbs-2.1-bioc/R/include -I/usr/local/include -fpic -g -O2 -Wall -c glad.cpp -o glad.o glad.cpp: In function `void detectOutliers(double*, int*, int*, int*, int*, int*, double*, int*)': glad.cpp:112: warning: comparison between signed and unsigned integer expressions gcc -std=gnu99 -I/loc/biocbuild/bbs-2.1-bioc/R/include -I/loc/biocbuild/bbs-2.1-bioc/R/include -I/usr/local/include -fpic -g -O2 -Wall -c glad-function.c -o glad-function.o gcc -std=gnu99 -I/loc/biocbuild/bbs-2.1-bioc/R/include -I/loc/biocbuild/bbs-2.1-bioc/R/include -I/usr/local/include -fpic -g -O2 -Wall -c hclust.c -o hclust.o gcc -std=gnu99 -I/loc/biocbuild/bbs-2.1-bioc/R/include -I/loc/biocbuild/bbs-2.1-bioc/R/include -I/usr/local/include -fpic -g -O2 -Wall -c laws.c -o laws.o g++ -shared -L/usr/local/lib -o GLAD.so distance.o glad.o glad-function.o hclust.o laws.o -L/loc/biocbuild/bbs-2.1-bioc/R/lib -lR ** R ** data ** demo ** inst ** preparing package for lazy loading Loading required package: aws Loading required package: tcltk Loading Tcl/Tk interface ... done ** help >>> Building/Updating help pages for package 'GLAD' Formats: text html latex example ChrNumeric text html latex example ColorBar text html latex example GLAD-internal text html latex arrayCGH text html latex example arrayPersp text html latex example arrayPlot text html latex example as.data.frame.profileCGH text html latex example as.profileCGH text html latex example bladder text html latex example cytoband text html latex example daglad text html latex example glad text html latex example hclust text html latex example kernel text html latex myPalette text html latex example plotProfile text html latex example profileCGH text html latex example snijders text html latex example tkdaglad text html latex example veltman text html latex example ** building package indices ... * DONE (GLAD) * creating vignettes ... OK * cleaning src * removing junk files * checking for LF line-endings in source files * checking for empty or unneeded directories * building 'GLAD_1.11.0.tar.gz'