Package: ecolitk

Version: 1.7.1

Command: D:\biocbld\2.0d\R\bin\R.exe CMD build ecolitk

RetCode: 1

Time: 21.5 seconds

Status: ERROR

PackageFile: None

* checking for file 'ecolitk/DESCRIPTION' ... OK
* preparing 'ecolitk':
* checking DESCRIPTION meta-information ... OK
* checking whether 'INDEX' is up-to-date ... NO
* use '--force' to overwrite the existing 'INDEX'
* installing the package to re-build vignettes
installing R.css in D:/biocbld/2.0d/tmpdir/Rinst495231466


---------- Making package ecolitk ------------
  adding build stamp to DESCRIPTION
  installing R files
  installing inst files
  installing data files
  installing man source files
  installing indices
  not zipping data
  installing help
 >>> Building/Updating help pages for package 'ecolitk'
     Formats: text html latex example chm 
  ecoli.data                        text    html    latex   example chm
  ecoligenome.operon                text    html    latex   example chm
  ecoligenomeBNUM                   text    html    latex           chm
  ecoligenomeBNUM2MULTIFUN          text    html    latex           chm
  gccontent                         text    html    latex           chm
  linkedmultiget                    text    html    latex   example chm
  multiFun                          text    html    latex   example chm
  pointsCircle                      text    html    latex   example chm
  polar2xy                          text    html    latex   example chm
  polygonChrom                      text    html    latex   example chm
  wstringapply                      text    html    latex   example chm
Microsoft HTML Help Compiler 4.74.8702



Compiling d:\biocbld\2.0d\Rpacks\ecolitk\chm\ecolitk.chm





Compile time: 0 minutes, 0 seconds

12	Topics

46	Local links

4	Internet links

1	Graphic





Created d:\biocbld\2.0d\Rpacks\ecolitk\chm\ecolitk.chm, 29,438 bytes

Compression decreased file by 12,866 bytes.

  adding MD5 sums

* DONE (ecolitk)
* creating vignettes ... ERROR
Loading required package: affy
Loading required package: Biobase

Welcome to Bioconductor

    Vignettes contain introductory material. To view, type
    'openVignette()' or start with 'help(Biobase)'. For details
    on reading vignettes, see the openVignette help page.

Loading required package: affyio
Loading required package: ecoliLeucine
Loading required package: ecolicdf
There were 14 warnings (use warnings() to see them)

Error:  chunk 14 
Error in assayData(object) : no slot of name "assayData" for this object of class "AffyBatch"
Error in buildVignettes(dir = ".") : Error:  chunk 14 
Error in assayData(object) : no slot of name "assayData" for this object of class "AffyBatch"
Execution halted