* checking for file 'ecolitk/DESCRIPTION' ... OK
* preparing 'ecolitk':
* checking DESCRIPTION meta-information ... OK
* checking whether 'INDEX' is up-to-date ... NO
* use '--force' to overwrite the existing 'INDEX'
* installing the package to re-build vignettes
* Installing *source* package 'ecolitk' ...
** R
** data
** inst
** help
>>> Building/Updating help pages for package 'ecolitk'
Formats: text html latex example
ecoli.data text html latex example
ecoligenome.operon text html latex example
ecoligenomeBNUM text html latex
ecoligenomeBNUM2MULTIFUN text html latex
gccontent text html latex
linkedmultiget text html latex example
multiFun text html latex example
pointsCircle text html latex example
polar2xy text html latex example
polygonChrom text html latex example
wstringapply text html latex example
** building package indices ...
* DONE (ecolitk)
* creating vignettes ... ERROR
Loading required package: affy
Loading required package: Biobase
Welcome to Bioconductor
Vignettes contain introductory material. To view, type
'openVignette()' or start with 'help(Biobase)'. For details
on reading vignettes, see the openVignette help page.
Loading required package: affyio
Loading required package: ecoliLeucine
Loading required package: ecolicdf
There were 14 warnings (use warnings() to see them)
Error: chunk 14
Error in assayData(object) : no slot of name "assayData" for this object of class "AffyBatch"
Error in buildVignettes(dir = ".") : Error: chunk 14
Error in assayData(object) : no slot of name "assayData" for this object of class "AffyBatch"
Execution halted