Back to Multiple platform build/check report for BioC 3.9 |
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This page was generated on 2018-10-29 10:39:10 -0400 (Mon, 29 Oct 2018).
Package 606/1642 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
Martin Slawski
| malbec2 | Linux (Ubuntu 16.04.1 LTS) / x86_64 | OK | OK | WARNINGS | |||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | OK | |||||||
merida2 | OS X 10.11.6 El Capitan / x86_64 | OK | OK | WARNINGS | [ OK ] |
Package: GeneSelector |
Version: 2.31.2 |
Command: rm -rf GeneSelector.buildbin-libdir && mkdir GeneSelector.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh GeneSelector_2.31.2.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R GeneSelector.buildbin-libdir |
StartedAt: 2018-10-29 05:19:36 -0400 (Mon, 29 Oct 2018) |
EndedAt: 2018-10-29 05:21:05 -0400 (Mon, 29 Oct 2018) |
EllapsedTime: 88.3 seconds |
RetCode: 0 |
Status: OK |
PackageFile: GeneSelector_2.31.2.tgz |
PackageFileSize: 1.034 MiB |
############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf GeneSelector.buildbin-libdir && mkdir GeneSelector.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh GeneSelector_2.31.2.tar.gz /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R GeneSelector.buildbin-libdir ### ############################################################################## ############################################################################## >>>>>>> >>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=GeneSelector.buildbin-libdir GeneSelector_2.31.2.tar.gz' >>>>>>> * installing *source* package ‘GeneSelector’ ... ** libs clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c kendall.c -o kendall.o clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c mcfour.c -o mcfour.o clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/usr/local/include -fPIC -Wall -g -O2 -c mct.c -o mct.o clang++ -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o GeneSelector.so kendall.o mcfour.o mct.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation installing to /Users/biocbuild/bbs-3.9-bioc/meat/GeneSelector.buildbin-libdir/GeneSelector/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded Warning: Package 'GeneSelector' is deprecated and will be removed from Bioconductor version 3.9 * DONE (GeneSelector) >>>>>>> >>>>>>> FIXING LINKS FOR GeneSelector.buildbin-libdir/GeneSelector/libs//GeneSelector.so >>>>>>> install_name_tool -change "/usr/local/lib/libgcc_s.1.dylib" "/Library/Frameworks/R.framework/Versions/3.6/Resources/lib/libgcc_s.1.dylib" "GeneSelector.buildbin-libdir/GeneSelector/libs//GeneSelector.so" install_name_tool -change "/usr/local/lib/libgfortran.3.dylib" "/Library/Frameworks/R.framework/Versions/3.6/Resources/lib/libgfortran.3.dylib" "GeneSelector.buildbin-libdir/GeneSelector/libs//GeneSelector.so" install_name_tool -change "/usr/local/lib/libreadline.5.2.dylib" "/Library/Frameworks/R.framework/Versions/3.6/Resources/lib/libreadline.5.2.dylib" "GeneSelector.buildbin-libdir/GeneSelector/libs//GeneSelector.so" install_name_tool -change "/usr/local/lib/libreadline.dylib" "/Library/Frameworks/R.framework/Versions/3.6/Resources/lib/libreadline.dylib" "GeneSelector.buildbin-libdir/GeneSelector/libs//GeneSelector.so" install_name_tool -change "/usr/local/lib/libquadmath.0.dylib" "/Library/Frameworks/R.framework/Versions/3.6/Resources/lib/libquadmath.0.dylib" "GeneSelector.buildbin-libdir/GeneSelector/libs//GeneSelector.so"