| Back to Multiple platform build/check report for BioC 3.14 |
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This page was generated on 2022-04-13 12:06:35 -0400 (Wed, 13 Apr 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
| tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
| machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
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To the developers/maintainers of the GDCRNATools package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/GDCRNATools.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 709/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| GDCRNATools 1.14.0 (landing page) Ruidong Li
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | ERROR | skipped | |||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | ERROR | skipped | skipped | |||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | ERROR | skipped | skipped | |||||||||
| Package: GDCRNATools |
| Version: 1.14.0 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/GDCRNATools_1.14.0.tar.gz && rm -rf GDCRNATools.buildbin-libdir && mkdir GDCRNATools.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GDCRNATools.buildbin-libdir GDCRNATools_1.14.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL GDCRNATools_1.14.0.zip && rm GDCRNATools_1.14.0.tar.gz GDCRNATools_1.14.0.zip |
| StartedAt: 2022-04-12 07:24:09 -0400 (Tue, 12 Apr 2022) |
| EndedAt: 2022-04-12 07:26:07 -0400 (Tue, 12 Apr 2022) |
| EllapsedTime: 118.3 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/GDCRNATools_1.14.0.tar.gz && rm -rf GDCRNATools.buildbin-libdir && mkdir GDCRNATools.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GDCRNATools.buildbin-libdir GDCRNATools_1.14.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL GDCRNATools_1.14.0.zip && rm GDCRNATools_1.14.0.tar.gz GDCRNATools_1.14.0.zip
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% Total % Received % Xferd Average Speed Time Time Time Current
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0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
14 3963k 14 575k 0 0 853k 0 0:00:04 --:--:-- 0:00:04 853k
57 3963k 57 2288k 0 0 1363k 0 0:00:02 0:00:01 0:00:01 1363k
100 3963k 100 3963k 0 0 1686k 0 0:00:02 0:00:02 --:--:-- 1687k
install for i386
* installing *source* package 'GDCRNATools' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'GDCRNATools'
finding HTML links ... done
DEGAll html
GDCRNATools-package html
enrichOutput html
gdcBarPlot html
gdcCEAnalysis html
gdcClinicalDownload html
gdcClinicalMerge html
gdcCorPlot html
gdcDEAnalysis html
gdcDEReport html
gdcEnrichAnalysis html
gdcEnrichPlot html
gdcExportNetwork html
gdcFilterDuplicate html
gdcFilterSampleType html
gdcHeatmap html
gdcKMPlot html
gdcMatchSamples html
gdcParseMetadata html
gdcRNADownload html
gdcRNAMerge html
gdcSurvivalAnalysis html
gdcVolcanoPlot html
gdcVoomNormalization html
lncTarget html
mirCounts html
pcTarget html
rnaCounts html
shinyCorPlot html
shinyKMPlot html
shinyPathview html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'GDCRNATools' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'GDCRNATools' as GDCRNATools_1.14.0.zip
* DONE (GDCRNATools)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'GDCRNATools' successfully unpacked and MD5 sums checked