Back to Build/check report for BioC 3.13 on Apple's new arm64 arch |
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This page was generated on 2021-01-31 03:53:36 -0500 (Sun, 31 Jan 2021).
These are experimental builds on Apple's new arm64 arch. See here for more information. |
To the developers/maintainers of the dexus package: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 468/1938 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
Guenter Klambauer
| taxco | macOS 11.0.1 Big Sur / arm64 | OK | NA | NA | |||||||||
Package: dexus |
Version: 1.31.1 |
Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD INSTALL dexus |
StartedAt: 2021-01-30 16:20:10 -0500 (Sat, 30 Jan 2021) |
EndedAt: 2021-01-30 16:20:21 -0500 (Sat, 30 Jan 2021) |
EllapsedTime: 11.0 seconds |
RetCode: 0 |
Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD INSTALL dexus ### ############################################################################## ############################################################################## * installing to library ‘/Library/Frameworks/R.framework/Versions/4.1-arm64/Resources/library’ * installing *source* package ‘dexus’ ... ** using staged installation ** libs clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c dexus.cpp -o dexus.o dexus.cpp:136:15: warning: equality comparison with extraneous parentheses [-Wparentheses-equality] if ((innerCyc==maxInnerCyc)) ~~~~~~~~^~~~~~~~~~~~~ dexus.cpp:136:15: note: remove extraneous parentheses around the comparison to silence this warning if ((innerCyc==maxInnerCyc)) ~ ^ ~ dexus.cpp:136:15: note: use '=' to turn this equality comparison into an assignment if ((innerCyc==maxInnerCyc)) ^~ = dexus.cpp:193:15: warning: unused variable 'DEFAULT_R' [-Wunused-variable] const double DEFAULT_R = 20; // R value used when re-setting clusters ^ dexus.cpp:575:15: warning: unused variable 'DEFAULT_R' [-Wunused-variable] const double DEFAULT_R = 20; // R value used when re-setting clusters ^ 3 warnings generated. clang++ -std=gnu++11 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/arm64/lib -o dexus.so dexus.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation installing to /Library/Frameworks/R.framework/Versions/4.1-arm64/Resources/library/00LOCK-dexus/00new/dexus/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location Warning: Package 'dexus' is deprecated and will be removed from Bioconductor version 3.14 ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location Warning: Package 'dexus' is deprecated and will be removed from Bioconductor version 3.14 ** testing if installed package keeps a record of temporary installation path * DONE (dexus)