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INSTALL report for bridge on taxco

This page was generated on 2021-01-31 03:53:36 -0500 (Sun, 31 Jan 2021).

These are experimental builds on Apple's new arm64 arch. See here for more information.
To the developers/maintainers of the bridge package:
Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 207/1938HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
bridge 1.55.0
Raphael Gottardo
Snapshot Date: 2021-01-30 14:40:03 -0500 (Sat, 30 Jan 2021)
URL: https://git.bioconductor.org/packages/bridge
Branch: master
Last Commit: d4adc22
Last Changed Date: 2020-10-27 10:26:08 -0500 (Tue, 27 Oct 2020)
taxcomacOS 11.0.1 Big Sur / arm64  ERROR    NA    NA  

Summary

Package: bridge
Version: 1.55.0
Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD INSTALL bridge
StartedAt: 2021-01-30 16:05:11 -0500 (Sat, 30 Jan 2021)
EndedAt: 2021-01-30 16:05:13 -0500 (Sat, 30 Jan 2021)
EllapsedTime: 1.6 seconds
RetCode: 1
Status:   ERROR  

Command output

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###
### Running command:
###
###   /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD INSTALL bridge
###
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* installing to library ‘/Library/Frameworks/R.framework/Versions/4.1-arm64/Resources/library’
* installing *source* package ‘bridge’ ...
** using staged installation
** libs
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -I/opt/R/arm64/include   -fPIC  -falign-functions=64 -Wall -g -O2  -c bridge2.affy.c -o bridge2.affy.o
bridge2.affy.c:37:7: warning: unused variable 'count_model' [-Wunused-variable]
  int count_model=0;
      ^
bridge2.affy.c:36:7: warning: unused variable 'old_model' [-Wunused-variable]
  int old_model;
      ^
bridge2.affy.c:302:3: error: implicit declaration of function 'dirichlet' is invalid in C99 [-Werror,-Wimplicit-function-declaration]
  dirichlet(gamma, 2, w);
  ^
bridge2.affy.c:302:3: note: did you mean 'dirichlet2'?
bridge2.affy.c:10:6: note: 'dirichlet2' declared here
void dirichlet2(double *gamma, int n, double *w);
     ^
bridge2.affy.c:282:10: warning: unused variable 'w_new' [-Wunused-variable]
  double w_new[2];
         ^
3 warnings and 1 error generated.
make: *** [bridge2.affy.o] Error 1
ERROR: compilation failed for package ‘bridge’
* removing ‘/Library/Frameworks/R.framework/Versions/4.1-arm64/Resources/library/bridge’