Back to Build/check report for BioC 3.13 on Apple's new arm64 arch |
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This page was generated on 2021-01-31 03:53:37 -0500 (Sun, 31 Jan 2021).
These are experimental builds on Apple's new arm64 arch. See here for more information. |
To the developers/maintainers of the VariantFiltering package: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 1897/1938 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
VariantFiltering 1.27.1 Robert Castelo
| taxco | macOS 11.0.1 Big Sur / arm64 | OK | NA | NA | |||||||||
Package: VariantFiltering |
Version: 1.27.1 |
Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD INSTALL VariantFiltering |
StartedAt: 2021-01-30 18:56:42 -0500 (Sat, 30 Jan 2021) |
EndedAt: 2021-01-30 18:58:37 -0500 (Sat, 30 Jan 2021) |
EllapsedTime: 115.7 seconds |
RetCode: 0 |
Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD INSTALL VariantFiltering ### ############################################################################## ############################################################################## * installing to library ‘/Library/Frameworks/R.framework/Versions/4.1-arm64/Resources/library’ * installing *source* package ‘VariantFiltering’ ... ** using staged installation ** libs clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Library/Frameworks/R.framework/Versions/4.1-arm64/Resources/library/S4Vectors/include' -I'/Library/Frameworks/R.framework/Versions/4.1-arm64/Resources/library/IRanges/include' -I'/Library/Frameworks/R.framework/Versions/4.1-arm64/Resources/library/XVector/include' -I'/Library/Frameworks/R.framework/Versions/4.1-arm64/Resources/library/Biostrings/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c Biostrings_stubs.c -o Biostrings_stubs.o clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Library/Frameworks/R.framework/Versions/4.1-arm64/Resources/library/S4Vectors/include' -I'/Library/Frameworks/R.framework/Versions/4.1-arm64/Resources/library/IRanges/include' -I'/Library/Frameworks/R.framework/Versions/4.1-arm64/Resources/library/XVector/include' -I'/Library/Frameworks/R.framework/Versions/4.1-arm64/Resources/library/Biostrings/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c R_init_VariantFiltering.c -o R_init_VariantFiltering.o clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I'/Library/Frameworks/R.framework/Versions/4.1-arm64/Resources/library/S4Vectors/include' -I'/Library/Frameworks/R.framework/Versions/4.1-arm64/Resources/library/IRanges/include' -I'/Library/Frameworks/R.framework/Versions/4.1-arm64/Resources/library/XVector/include' -I'/Library/Frameworks/R.framework/Versions/4.1-arm64/Resources/library/Biostrings/include' -I/opt/R/arm64/include -fPIC -falign-functions=64 -Wall -g -O2 -c methods-WeightMatrix.c -o methods-WeightMatrix.o clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/arm64/lib -o VariantFiltering.so Biostrings_stubs.o R_init_VariantFiltering.o methods-WeightMatrix.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation installing to /Library/Frameworks/R.framework/Versions/4.1-arm64/Resources/library/00LOCK-VariantFiltering/00new/VariantFiltering/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (VariantFiltering)