Back to Build/check report for BioC 3.13 on Apple's new arm64 arch
ABCDEFG[H]IJKLMNOPQRSTUVWXYZ

INSTALL report for HilbertVis on taxco

This page was generated on 2021-01-31 03:53:36 -0500 (Sun, 31 Jan 2021).

These are experimental builds on Apple's new arm64 arch. See here for more information.
To the developers/maintainers of the HilbertVis package:
Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 820/1938HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
HilbertVis 1.49.0
Simon Anders
Snapshot Date: 2021-01-30 14:40:03 -0500 (Sat, 30 Jan 2021)
URL: https://git.bioconductor.org/packages/HilbertVis
Branch: master
Last Commit: 933bd9c
Last Changed Date: 2020-10-27 10:34:54 -0500 (Tue, 27 Oct 2020)
taxcomacOS 11.0.1 Big Sur / arm64  OK    NA    NA  

Summary

Package: HilbertVis
Version: 1.49.0
Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD INSTALL HilbertVis
StartedAt: 2021-01-30 16:08:31 -0500 (Sat, 30 Jan 2021)
EndedAt: 2021-01-30 16:08:36 -0500 (Sat, 30 Jan 2021)
EllapsedTime: 4.9 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD INSTALL HilbertVis
###
##############################################################################
##############################################################################


* installing to library ‘/Library/Frameworks/R.framework/Versions/4.1-arm64/Resources/library’
* installing *source* package ‘HilbertVis’ ...
** using staged installation
** libs
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -I/opt/R/arm64/include   -fPIC  -falign-functions=64 -Wall -g -O2  -c hilbert.c -o hilbert.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -I/opt/R/arm64/include   -fPIC  -falign-functions=64 -Wall -g -O2  -c make_wiggle_vector.c -o make_wiggle_vector.o
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -I/opt/R/arm64/include   -fPIC  -falign-functions=64 -Wall -g -O2  -c shrink_vector.c -o shrink_vector.o
shrink_vector.c:76:20: warning: using integer absolute value function 'abs' when argument is of floating point type [-Wabsolute-value]
               if( abs( REAL( vector )[ j ] ) > abs( val ) )
                   ^
shrink_vector.c:76:20: note: use function 'fabs' instead
               if( abs( REAL( vector )[ j ] ) > abs( val ) )
                   ^~~
                   fabs
shrink_vector.c:76:49: warning: using integer absolute value function 'abs' when argument is of floating point type [-Wabsolute-value]
               if( abs( REAL( vector )[ j ] ) > abs( val ) )
                                                ^
shrink_vector.c:76:49: note: use function 'fabs' instead
               if( abs( REAL( vector )[ j ] ) > abs( val ) )
                                                ^~~
                                                fabs
2 warnings generated.
clang -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/opt/R/arm64/lib -o HilbertVis.so hilbert.o make_wiggle_vector.o shrink_vector.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Library/Frameworks/R.framework/Versions/4.1-arm64/Resources/library/00LOCK-HilbertVis/00new/HilbertVis/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (HilbertVis)