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INSTALL report for ChemmineOB on taxco

This page was generated on 2021-01-31 03:53:36 -0500 (Sun, 31 Jan 2021).

These are experimental builds on Apple's new arm64 arch. See here for more information.
To the developers/maintainers of the ChemmineOB package:
Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 274/1938HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ChemmineOB 1.29.4
Thomas Girke
Snapshot Date: 2021-01-30 14:40:03 -0500 (Sat, 30 Jan 2021)
URL: https://git.bioconductor.org/packages/ChemmineOB
Branch: master
Last Commit: 7b7b3de
Last Changed Date: 2021-01-25 15:15:09 -0500 (Mon, 25 Jan 2021)
taxcomacOS 11.0.1 Big Sur / arm64  ERROR    NA    NA  

Summary

Package: ChemmineOB
Version: 1.29.4
Command: /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD INSTALL ChemmineOB
StartedAt: 2021-01-30 16:33:50 -0500 (Sat, 30 Jan 2021)
EndedAt: 2021-01-30 16:34:00 -0500 (Sat, 30 Jan 2021)
EllapsedTime: 10.6 seconds
RetCode: 1
Status:   ERROR  

Command output

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### Running command:
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###   /Library/Frameworks/R.framework/Versions/Current/Resources/bin/R CMD INSTALL ChemmineOB
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* installing to library ‘/Library/Frameworks/R.framework/Versions/4.1-arm64/Resources/library’
* installing *source* package ‘ChemmineOB’ ...
** using staged installation
checking for pkg-config... /opt/R/arm64/bin/pkg-config
checking pkg-config is at least version 0.9.0... yes
checking for OPENBABEL... no
checking for OPENBABEL... no
checking for gcc... clang
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether clang accepts -g... yes
checking for clang option to accept ISO C89... none needed
checking how to run the C preprocessor... clang -E
configure: creating ./config.status
config.status: creating src/Makevars
** libs
clang++ -std=gnu++11 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG -I/usr/include/openbabel3  -I/usr/include/eigen3  -DUSE_BOOST -DHAVE_EIGEN  -I/usr/local/Cellar/eigen/3.3.8_1/include/eigen3 -I/usr/local/Cellar/open-babel/3.1.1_1/include/openbabel3    -I'/Library/Frameworks/R.framework/Versions/4.1-arm64/Resources/library/BH/include' -I'/Library/Frameworks/R.framework/Versions/4.1-arm64/Resources/library/Rcpp/include' -I/opt/R/arm64/include   -fPIC  -falign-functions=64 -Wall -g -O2  -c ChemmineOB.cpp -o ChemmineOB.o
ChemmineOB.cpp:1569:10: fatal error: 'openbabel/obutil.h' file not found
#include <openbabel/obutil.h>
         ^~~~~~~~~~~~~~~~~~~~
1 error generated.
make: *** [ChemmineOB.o] Error 1
ERROR: compilation failed for package ‘ChemmineOB’
* removing ‘/Library/Frameworks/R.framework/Versions/4.1-arm64/Resources/library/ChemmineOB’