Back to Multiple platform build/check report for BioC 3.13 |
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This page was generated on 2021-10-15 15:06:07 -0400 (Fri, 15 Oct 2021).
To the developers/maintainers of the Herper package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/Herper.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 852/2041 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
Herper 1.2.0 (landing page) Thomas Carroll
| nebbiolo1 | Linux (Ubuntu 20.04.2 LTS) / x86_64 | OK | OK | OK | |||||||||
tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | |||||||||
machv2 | macOS 10.14.6 Mojave / x86_64 | OK | TIMEOUT | skipped | skipped | |||||||||
Package: Herper |
Version: 1.2.0 |
Command: C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD check --force-multiarch --install=check:Herper.install-out.txt --library=C:\Users\biocbuild\bbs-3.13-bioc\R\library --no-vignettes --timings Herper_1.2.0.tar.gz |
StartedAt: 2021-10-15 00:20:30 -0400 (Fri, 15 Oct 2021) |
EndedAt: 2021-10-15 00:58:17 -0400 (Fri, 15 Oct 2021) |
EllapsedTime: 2267.0 seconds |
RetCode: 0 |
Status: OK |
CheckDir: Herper.Rcheck |
Warnings: 0 |
############################################################################## ############################################################################## ### ### Running command: ### ### C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD check --force-multiarch --install=check:Herper.install-out.txt --library=C:\Users\biocbuild\bbs-3.13-bioc\R\library --no-vignettes --timings Herper_1.2.0.tar.gz ### ############################################################################## ############################################################################## * using log directory 'C:/Users/biocbuild/bbs-3.13-bioc/meat/Herper.Rcheck' * using R version 4.1.1 (2021-08-10) * using platform: x86_64-w64-mingw32 (64-bit) * using session charset: ISO8859-1 * using option '--no-vignettes' * checking for file 'Herper/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'Herper' version '1.2.0' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'Herper' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * loading checks for arch 'i386' ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking whether the package can be unloaded cleanly ... OK ** checking whether the namespace can be loaded with stated dependencies ... OK ** checking whether the namespace can be unloaded cleanly ... OK * loading checks for arch 'x64' ** checking whether the package can be loaded ... OK ** checking whether the package can be loaded with stated dependencies ... OK ** checking whether the package can be unloaded cleanly ... OK ** checking whether the namespace can be loaded with stated dependencies ... OK ** checking whether the namespace can be unloaded cleanly ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking files in 'vignettes' ... OK * checking examples ... ** running examples for arch 'i386' ... OK Examples with CPU (user + system) or elapsed time > 5s user system elapsed ListCondaEnvironments 0.32 0.52 210.76 UseEnvironments 0.01 0.36 128.01 install_CondaSysReqs 0.07 0.25 18.10 ListCondaPackages 0.04 0.08 5.52 SaveEnvironments 0.00 0.07 11.06 install_CondaTools 0.00 0.00 6.36 search_conda 0.00 0.00 6.05 ** running examples for arch 'x64' ... OK Examples with CPU (user + system) or elapsed time > 5s user system elapsed ListCondaEnvironments 0.30 0.45 341.89 UseEnvironments 0.07 0.34 267.50 install_CondaSysReqs 0.08 0.26 25.50 ListCondaPackages 0.00 0.12 10.09 SaveEnvironments 0.00 0.04 13.14 install_CondaTools 0.00 0.02 10.64 search_conda 0.00 0.02 10.53 * checking for unstated dependencies in 'tests' ... OK * checking tests ... ** running tests for arch 'i386' ... Running 'testthat.R' OK ** running tests for arch 'x64' ... Running 'testthat.R' OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes in 'inst/doc' ... OK * checking running R code from vignettes ... SKIPPED * checking re-building of vignette outputs ... SKIPPED * checking PDF version of manual ... OK * DONE Status: OK
Herper.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/Herper_1.2.0.tar.gz && rm -rf Herper.buildbin-libdir && mkdir Herper.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=Herper.buildbin-libdir Herper_1.2.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL Herper_1.2.0.zip && rm Herper_1.2.0.tar.gz Herper_1.2.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 54 589k 54 324k 0 0 1231k 0 --:--:-- --:--:-- --:--:-- 1232k 100 589k 100 589k 0 0 2200k 0 --:--:-- --:--:-- --:--:-- 2201k install for i386 * installing *source* package 'Herper' ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'Herper' finding HTML links ... done ListCondaEnvironments html ListCondaPackages html SaveEnvironments html UseEnvironments html conda_create_silentJSON html conda_install_silentJSON html install_CondaSysReqs html install_CondaTools html search_conda html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'Herper' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'Herper' as Herper_1.2.0.zip * DONE (Herper) * installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library' package 'Herper' successfully unpacked and MD5 sums checked
Herper.Rcheck/tests_i386/testthat.Rout R version 4.1.1 (2021-08-10) -- "Kick Things" Copyright (C) 2021 The R Foundation for Statistical Computing Platform: i386-w64-mingw32/i386 (32-bit) R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > library(testthat) > library(Herper) Loading required package: reticulate > > test_check("Herper") trying URL 'https://repo.anaconda.com/miniconda/Miniconda3-latest-Windows-x86.exe' Content type 'application/octet-stream' length 57981080 bytes (55.3 MB) ================================================== downloaded 55.3 MB Collecting package metadata (current_repodata.json): ...working... done Solving environment: ...working... done ## Package Plan ## environment location: C:\Users\BIOCBU~1\BBS-3~1.13-\tmpdir\RTMP82~1\Test added / updated specs: - conda The following packages will be downloaded: package | build ---------------------------|----------------- ca-certificates-2021.9.30 | h9f7ea03_1 116 KB certifi-2021.10.8 | py39h9f7ea03_0 152 KB charset-normalizer-2.0.4 | pyhd3eb1b0_0 35 KB idna-3.2 | pyhd3eb1b0_0 48 KB openssl-1.1.1l | hc431981_0 4.4 MB pip-21.2.4 | py39h9f7ea03_0 1.8 MB requests-2.26.0 | pyhd3eb1b0_0 59 KB setuptools-58.0.4 | py39h9f7ea03_0 792 KB tqdm-4.62.2 | pyhd3eb1b0_1 96 KB tzdata-2021a | h5d7bf9c_0 111 KB urllib3-1.26.7 | pyhd3eb1b0_0 111 KB wheel-0.37.0 | pyhd3eb1b0_1 33 KB wincertstore-0.2 | py39h9f7ea03_2 15 KB ------------------------------------------------------------ Total: 7.7 MB The following NEW packages will be INSTALLED: charset-normalizer pkgs/main/noarch::charset-normalizer-2.0.4-pyhd3eb1b0_0 The following packages will be REMOVED: chardet-4.0.0-py39h9f7ea03_1003 The following packages will be UPDATED: ca-certificates 2021.7.5-h9f7ea03_1 --> 2021.9.30-h9f7ea03_1 certifi 2021.5.30-py39h9f7ea03_0 --> 2021.10.8-py39h9f7ea03_0 idna 2.10-pyhd3eb1b0_0 --> 3.2-pyhd3eb1b0_0 openssl 1.1.1k-hc431981_0 --> 1.1.1l-hc431981_0 pip 21.1.3-py39h9f7ea03_0 --> 21.2.4-py39h9f7ea03_0 requests 2.25.1-pyhd3eb1b0_0 --> 2.26.0-pyhd3eb1b0_0 setuptools 52.0.0-py39h9f7ea03_0 --> 58.0.4-py39h9f7ea03_0 tqdm 4.61.2-pyhd3eb1b0_1 --> 4.62.2-pyhd3eb1b0_1 urllib3 1.26.6-pyhd3eb1b0_1 --> 1.26.7-pyhd3eb1b0_0 wheel 0.36.2-pyhd3eb1b0_0 --> 0.37.0-pyhd3eb1b0_1 wincertstore 0.2-py39hc431981_0 --> 0.2-py39h9f7ea03_2 The following packages will be DOWNGRADED: tzdata 2021a-h52ac0ba_0 --> 2021a-h5d7bf9c_0 Downloading and Extracting Packages idna-3.2 | 48 KB | | 0% idna-3.2 | 48 KB | ###3 | 33% idna-3.2 | 48 KB | ########## | 100% idna-3.2 | 48 KB | ########## | 100% urllib3-1.26.7 | 111 KB | | 0% urllib3-1.26.7 | 111 KB | ########## | 100% urllib3-1.26.7 | 111 KB | ########## | 100% wheel-0.37.0 | 33 KB | | 0% wheel-0.37.0 | 33 KB | ########## | 100% wheel-0.37.0 | 33 KB | ########## | 100% tzdata-2021a | 111 KB | | 0% tzdata-2021a | 111 KB | ########## | 100% tzdata-2021a | 111 KB | ########## | 100% requests-2.26.0 | 59 KB | | 0% requests-2.26.0 | 59 KB | ########## | 100% requests-2.26.0 | 59 KB | ########## | 100% tqdm-4.62.2 | 96 KB | | 0% tqdm-4.62.2 | 96 KB | ########## | 100% tqdm-4.62.2 | 96 KB | ########## | 100% pip-21.2.4 | 1.8 MB | | 0% pip-21.2.4 | 1.8 MB | #1 | 11% pip-21.2.4 | 1.8 MB | ########## | 100% pip-21.2.4 | 1.8 MB | ########## | 100% charset-normalizer-2 | 35 KB | | 0% charset-normalizer-2 | 35 KB | ########## | 100% charset-normalizer-2 | 35 KB | ########## | 100% ca-certificates-2021 | 116 KB | | 0% ca-certificates-2021 | 116 KB | ########## | 100% ca-certificates-2021 | 116 KB | ########## | 100% openssl-1.1.1l | 4.4 MB | | 0% openssl-1.1.1l | 4.4 MB | #7 | 18% openssl-1.1.1l | 4.4 MB | ########## | 100% openssl-1.1.1l | 4.4 MB | ########## | 100% certifi-2021.10.8 | 152 KB | | 0% certifi-2021.10.8 | 152 KB | ########## | 100% certifi-2021.10.8 | 152 KB | ########## | 100% setuptools-58.0.4 | 792 KB | | 0% setuptools-58.0.4 | 792 KB | ######4 | 65% setuptools-58.0.4 | 792 KB | ########## | 100% wincertstore-0.2 | 15 KB | | 0% wincertstore-0.2 | 15 KB | ########## | 100% wincertstore-0.2 | 15 KB | ########## | 100% Preparing transaction: ...working... done Verifying transaction: ...working... done Executing transaction: ...working... done Collecting package metadata (current_repodata.json): ...working... done Solving environment: ...working... done ## Package Plan ## environment location: C:\Users\BIOCBU~1\BBS-3~1.13-\tmpdir\RTMP82~1\Test\envs\r-reticulate added / updated specs: - numpy - python=3.6 The following packages will be downloaded: package | build ---------------------------|----------------- blas-1.0 | mkl 6 KB certifi-2018.4.16 | py36_0 143 KB conda-forge intel-openmp-2021.3.0 | h9f7ea03_3372 1.2 MB mkl-2020.2 | 256 56.5 MB mkl-service-2.3.0 | py36hdb075cb_0 40 KB mkl_fft-1.0.9 | py36_0 112 KB conda-forge mkl_random-1.0.1 | py36_0 216 KB conda-forge numpy-1.19.2 | py36h0f2e2a7_0 22 KB numpy-base-1.19.2 | py36hfe54e71_0 3.6 MB pip-21.3 | pyhd8ed1ab_0 1.2 MB conda-forge python-3.6.5 | 1 18.1 MB conda-forge setuptools-39.0.1 | py36_0 572 KB conda-forge six-1.16.0 | pyh6c4a22f_0 14 KB conda-forge wheel-0.37.0 | pyhd8ed1ab_1 31 KB conda-forge wincertstore-0.2 | py36_0 11 KB conda-forge ------------------------------------------------------------ Total: 81.7 MB The following NEW packages will be INSTALLED: blas pkgs/main/win-32::blas-1.0-mkl certifi conda-forge/win-32::certifi-2018.4.16-py36_0 intel-openmp pkgs/main/win-32::intel-openmp-2021.3.0-h9f7ea03_3372 mkl pkgs/main/win-32::mkl-2020.2-256 mkl-service pkgs/main/win-32::mkl-service-2.3.0-py36hdb075cb_0 mkl_fft conda-forge/win-32::mkl_fft-1.0.9-py36_0 mkl_random conda-forge/win-32::mkl_random-1.0.1-py36_0 numpy pkgs/main/win-32::numpy-1.19.2-py36h0f2e2a7_0 numpy-base pkgs/main/win-32::numpy-base-1.19.2-py36hfe54e71_0 pip conda-forge/noarch::pip-21.3-pyhd8ed1ab_0 python conda-forge/win-32::python-3.6.5-1 setuptools conda-forge/win-32::setuptools-39.0.1-py36_0 six conda-forge/noarch::six-1.16.0-pyh6c4a22f_0 vc pkgs/main/win-32::vc-14.2-h21ff451_1 vs2015_runtime pkgs/main/win-32::vs2015_runtime-14.27.29016-h5e58377_2 wheel conda-forge/noarch::wheel-0.37.0-pyhd8ed1ab_1 wincertstore conda-forge/win-32::wincertstore-0.2-py36_0 Downloading and Extracting Packages mkl-service-2.3.0 | 40 KB | | 0% mkl-service-2.3.0 | 40 KB | ###9 | 40% mkl-service-2.3.0 | 40 KB | ########## | 100% mkl-service-2.3.0 | 40 KB | ########## | 100% wheel-0.37.0 | 31 KB | | 0% wheel-0.37.0 | 31 KB | #####1 | 52% wheel-0.37.0 | 31 KB | ########## | 100% certifi-2018.4.16 | 143 KB | | 0% certifi-2018.4.16 | 143 KB | ####4 | 45% certifi-2018.4.16 | 143 KB | ########## | 100% certifi-2018.4.16 | 143 KB | ########## | 100% six-1.16.0 | 14 KB | | 0% six-1.16.0 | 14 KB | ########## | 100% six-1.16.0 | 14 KB | ########## | 100% numpy-1.19.2 | 22 KB | | 0% numpy-1.19.2 | 22 KB | ########## | 100% numpy-1.19.2 | 22 KB | ########## | 100% mkl_random-1.0.1 | 216 KB | | 0% mkl_random-1.0.1 | 216 KB | ##9 | 30% mkl_random-1.0.1 | 216 KB | ########## | 100% mkl_random-1.0.1 | 216 KB | ########## | 100% setuptools-39.0.1 | 572 KB | | 0% setuptools-39.0.1 | 572 KB | ####7 | 48% setuptools-39.0.1 | 572 KB | ########## | 100% setuptools-39.0.1 | 572 KB | ########## | 100% mkl-2020.2 | 56.5 MB | | 0% mkl-2020.2 | 56.5 MB | | 0% mkl-2020.2 | 56.5 MB | 1 | 1% mkl-2020.2 | 56.5 MB | 3 | 4% mkl-2020.2 | 56.5 MB | 9 | 10% mkl-2020.2 | 56.5 MB | #9 | 20% mkl-2020.2 | 56.5 MB | ##4 | 25% mkl-2020.2 | 56.5 MB | ###2 | 33% mkl-2020.2 | 56.5 MB | ###9 | 39% mkl-2020.2 | 56.5 MB | ####7 | 48% mkl-2020.2 | 56.5 MB | #####5 | 56% mkl-2020.2 | 56.5 MB | ######2 | 62% mkl-2020.2 | 56.5 MB | ######8 | 69% mkl-2020.2 | 56.5 MB | #######4 | 75% mkl-2020.2 | 56.5 MB | ######## | 81% mkl-2020.2 | 56.5 MB | ########6 | 87% mkl-2020.2 | 56.5 MB | #########2 | 92% mkl-2020.2 | 56.5 MB | #########7 | 97% mkl-2020.2 | 56.5 MB | ########## | 100% intel-openmp-2021.3. | 1.2 MB | | 0% intel-openmp-2021.3. | 1.2 MB | ##4 | 24% intel-openmp-2021.3. | 1.2 MB | ########## | 100% intel-openmp-2021.3. | 1.2 MB | ########## | 100% mkl_fft-1.0.9 | 112 KB | | 0% mkl_fft-1.0.9 | 112 KB | ########## | 100% mkl_fft-1.0.9 | 112 KB | ########## | 100% blas-1.0 | 6 KB | | 0% blas-1.0 | 6 KB | ########## | 100% blas-1.0 | 6 KB | ########## | 100% python-3.6.5 | 18.1 MB | | 0% python-3.6.5 | 18.1 MB | 1 | 1% python-3.6.5 | 18.1 MB | 8 | 9% python-3.6.5 | 18.1 MB | ###7 | 37% python-3.6.5 | 18.1 MB | #####1 | 52% python-3.6.5 | 18.1 MB | ######4 | 64% python-3.6.5 | 18.1 MB | #######5 | 76% python-3.6.5 | 18.1 MB | #########9 | 100% python-3.6.5 | 18.1 MB | ########## | 100% wincertstore-0.2 | 11 KB | | 0% wincertstore-0.2 | 11 KB | ########## | 100% wincertstore-0.2 | 11 KB | ########## | 100% numpy-base-1.19.2 | 3.6 MB | | 0% numpy-base-1.19.2 | 3.6 MB | # | 10% numpy-base-1.19.2 | 3.6 MB | ######1 | 62% numpy-base-1.19.2 | 3.6 MB | ########## | 100% numpy-base-1.19.2 | 3.6 MB | ########## | 100% pip-21.3 | 1.2 MB | | 0% pip-21.3 | 1.2 MB | ####6 | 47% pip-21.3 | 1.2 MB | ########## | 100% pip-21.3 | 1.2 MB | ########## | 100% Preparing transaction: ...working... done Verifying transaction: ...working... done Executing transaction: ...working... done # # To activate this environment, use # # $ conda activate r-reticulate # # To deactivate an active environment, use # # $ conda deactivate [ FAIL 0 | WARN 2 | SKIP 0 | PASS 3 ] > > proc.time() user system elapsed 2.75 1.71 451.54 |
Herper.Rcheck/tests_x64/testthat.Rout R version 4.1.1 (2021-08-10) -- "Kick Things" Copyright (C) 2021 The R Foundation for Statistical Computing Platform: x86_64-w64-mingw32/x64 (64-bit) R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > library(testthat) > library(Herper) Loading required package: reticulate > > test_check("Herper") trying URL 'https://repo.anaconda.com/miniconda/Miniconda3-latest-Windows-x86_64.exe' Content type 'application/octet-stream' length 60924672 bytes (58.1 MB) ================================================== downloaded 58.1 MB Collecting package metadata (current_repodata.json): ...working... done Solving environment: ...working... done ## Package Plan ## environment location: C:\Users\BIOCBU~1\BBS-3~1.13-\tmpdir\RTMPKD~1\Test added / updated specs: - conda The following packages will be downloaded: package | build ---------------------------|----------------- ca-certificates-2021.9.30 | haa95532_1 116 KB certifi-2021.10.8 | py39haa95532_0 152 KB charset-normalizer-2.0.4 | pyhd3eb1b0_0 35 KB cryptography-3.4.8 | py39h71e12ea_0 638 KB idna-3.2 | pyhd3eb1b0_0 48 KB openssl-1.1.1l | h2bbff1b_0 4.8 MB pip-21.2.4 | py39haa95532_0 1.8 MB pywin32-228 | py39hbaba5e8_1 5.6 MB requests-2.26.0 | pyhd3eb1b0_0 59 KB setuptools-58.0.4 | py39haa95532_0 778 KB tqdm-4.62.2 | pyhd3eb1b0_1 96 KB tzdata-2021a | h5d7bf9c_0 111 KB urllib3-1.26.7 | pyhd3eb1b0_0 111 KB wheel-0.37.0 | pyhd3eb1b0_1 33 KB wincertstore-0.2 | py39haa95532_2 15 KB ------------------------------------------------------------ Total: 14.4 MB The following NEW packages will be INSTALLED: charset-normalizer pkgs/main/noarch::charset-normalizer-2.0.4-pyhd3eb1b0_0 The following packages will be REMOVED: chardet-4.0.0-py39haa95532_1003 The following packages will be UPDATED: ca-certificates 2021.7.5-haa95532_1 --> 2021.9.30-haa95532_1 certifi 2021.5.30-py39haa95532_0 --> 2021.10.8-py39haa95532_0 cryptography 3.4.7-py39h71e12ea_0 --> 3.4.8-py39h71e12ea_0 idna 2.10-pyhd3eb1b0_0 --> 3.2-pyhd3eb1b0_0 openssl 1.1.1k-h2bbff1b_0 --> 1.1.1l-h2bbff1b_0 pip 21.1.3-py39haa95532_0 --> 21.2.4-py39haa95532_0 pywin32 228-py39he774522_0 --> 228-py39hbaba5e8_1 requests 2.25.1-pyhd3eb1b0_0 --> 2.26.0-pyhd3eb1b0_0 setuptools 52.0.0-py39haa95532_0 --> 58.0.4-py39haa95532_0 tqdm 4.61.2-pyhd3eb1b0_1 --> 4.62.2-pyhd3eb1b0_1 urllib3 1.26.6-pyhd3eb1b0_1 --> 1.26.7-pyhd3eb1b0_0 wheel 0.36.2-pyhd3eb1b0_0 --> 0.37.0-pyhd3eb1b0_1 wincertstore 0.2-py39h2bbff1b_0 --> 0.2-py39haa95532_2 The following packages will be DOWNGRADED: tzdata 2021a-h52ac0ba_0 --> 2021a-h5d7bf9c_0 Downloading and Extracting Packages wincertstore-0.2 | 15 KB | | 0% wincertstore-0.2 | 15 KB | ########## | 100% wincertstore-0.2 | 15 KB | ########## | 100% requests-2.26.0 | 59 KB | | 0% requests-2.26.0 | 59 KB | ########## | 100% requests-2.26.0 | 59 KB | ########## | 100% certifi-2021.10.8 | 152 KB | | 0% certifi-2021.10.8 | 152 KB | ########4 | 84% certifi-2021.10.8 | 152 KB | ########## | 100% cryptography-3.4.8 | 638 KB | | 0% cryptography-3.4.8 | 638 KB | ###5 | 35% cryptography-3.4.8 | 638 KB | ########## | 100% cryptography-3.4.8 | 638 KB | ########## | 100% idna-3.2 | 48 KB | | 0% idna-3.2 | 48 KB | ########## | 100% idna-3.2 | 48 KB | ########## | 100% openssl-1.1.1l | 4.8 MB | | 0% openssl-1.1.1l | 4.8 MB | #1 | 11% openssl-1.1.1l | 4.8 MB | ##### | 50% openssl-1.1.1l | 4.8 MB | ########## | 100% openssl-1.1.1l | 4.8 MB | ########## | 100% tzdata-2021a | 111 KB | | 0% tzdata-2021a | 111 KB | ########## | 100% tzdata-2021a | 111 KB | ########## | 100% charset-normalizer-2 | 35 KB | | 0% charset-normalizer-2 | 35 KB | ########## | 100% charset-normalizer-2 | 35 KB | ########## | 100% urllib3-1.26.7 | 111 KB | | 0% urllib3-1.26.7 | 111 KB | ########## | 100% urllib3-1.26.7 | 111 KB | ########## | 100% wheel-0.37.0 | 33 KB | | 0% wheel-0.37.0 | 33 KB | ########## | 100% wheel-0.37.0 | 33 KB | ########## | 100% pip-21.2.4 | 1.8 MB | | 0% pip-21.2.4 | 1.8 MB | ##4 | 25% pip-21.2.4 | 1.8 MB | ########## | 100% pip-21.2.4 | 1.8 MB | ########## | 100% tqdm-4.62.2 | 96 KB | | 0% tqdm-4.62.2 | 96 KB | ########## | 100% tqdm-4.62.2 | 96 KB | ########## | 100% setuptools-58.0.4 | 778 KB | | 0% setuptools-58.0.4 | 778 KB | ########## | 100% setuptools-58.0.4 | 778 KB | ########## | 100% ca-certificates-2021 | 116 KB | | 0% ca-certificates-2021 | 116 KB | ########## | 100% pywin32-228 | 5.6 MB | | 0% pywin32-228 | 5.6 MB | 8 | 8% pywin32-228 | 5.6 MB | ######6 | 67% pywin32-228 | 5.6 MB | ########## | 100% Preparing transaction: ...working... done Verifying transaction: ...working... done Executing transaction: ...working... done Collecting package metadata (current_repodata.json): ...working... done Solving environment: ...working... done ## Package Plan ## environment location: C:\Users\BIOCBU~1\BBS-3~1.13-\tmpdir\RTMPKD~1\Test\envs\r-reticulate added / updated specs: - numpy - python=3.6 The following packages will be downloaded: package | build ---------------------------|----------------- certifi-2020.12.5 | py36haa95532_0 140 KB intel-openmp-2021.4.0 | h57928b3_3556 3.2 MB conda-forge libblas-3.9.0 | 11_win64_mkl 4.5 MB conda-forge libcblas-3.9.0 | 11_win64_mkl 4.5 MB conda-forge liblapack-3.9.0 | 11_win64_mkl 4.5 MB conda-forge mkl-2021.3.0 | hb70f87d_564 179.7 MB conda-forge numpy-1.19.5 | py36h4b40d73_2 4.9 MB conda-forge pip-21.3 | pyhd8ed1ab_0 1.2 MB conda-forge python-3.6.13 |h39d44d4_2_cpython 18.9 MB conda-forge python_abi-3.6 | 2_cp36m 4 KB conda-forge setuptools-49.6.0 | py36ha15d459_3 921 KB conda-forge tbb-2021.3.0 | h2d74725_0 143 KB conda-forge ucrt-10.0.20348.0 | h57928b3_0 1.2 MB conda-forge vc-14.2 | hb210afc_5 13 KB conda-forge vs2015_runtime-14.29.30037 | h902a5da_5 1.3 MB conda-forge wheel-0.37.0 | pyhd8ed1ab_1 31 KB conda-forge wincertstore-0.2 |py36ha15d459_1006 15 KB conda-forge ------------------------------------------------------------ Total: 225.0 MB The following NEW packages will be INSTALLED: certifi pkgs/main/win-64::certifi-2020.12.5-py36haa95532_0 intel-openmp conda-forge/win-64::intel-openmp-2021.4.0-h57928b3_3556 libblas conda-forge/win-64::libblas-3.9.0-11_win64_mkl libcblas conda-forge/win-64::libcblas-3.9.0-11_win64_mkl liblapack conda-forge/win-64::liblapack-3.9.0-11_win64_mkl mkl conda-forge/win-64::mkl-2021.3.0-hb70f87d_564 numpy conda-forge/win-64::numpy-1.19.5-py36h4b40d73_2 pip conda-forge/noarch::pip-21.3-pyhd8ed1ab_0 python conda-forge/win-64::python-3.6.13-h39d44d4_2_cpython python_abi conda-forge/win-64::python_abi-3.6-2_cp36m setuptools conda-forge/win-64::setuptools-49.6.0-py36ha15d459_3 tbb conda-forge/win-64::tbb-2021.3.0-h2d74725_0 ucrt conda-forge/win-64::ucrt-10.0.20348.0-h57928b3_0 vc conda-forge/win-64::vc-14.2-hb210afc_5 vs2015_runtime conda-forge/win-64::vs2015_runtime-14.29.30037-h902a5da_5 wheel conda-forge/noarch::wheel-0.37.0-pyhd8ed1ab_1 wincertstore conda-forge/win-64::wincertstore-0.2-py36ha15d459_1006 Downloading and Extracting Packages ucrt-10.0.20348.0 | 1.2 MB | | 0% ucrt-10.0.20348.0 | 1.2 MB | 1 | 1% ucrt-10.0.20348.0 | 1.2 MB | #3 | 13% ucrt-10.0.20348.0 | 1.2 MB | #######5 | 76% ucrt-10.0.20348.0 | 1.2 MB | ########## | 100% libblas-3.9.0 | 4.5 MB | | 0% libblas-3.9.0 | 4.5 MB | 5 | 6% libblas-3.9.0 | 4.5 MB | #####7 | 58% libblas-3.9.0 | 4.5 MB | ########## | 100% libblas-3.9.0 | 4.5 MB | ########## | 100% certifi-2020.12.5 | 140 KB | | 0% certifi-2020.12.5 | 140 KB | #1 | 11% certifi-2020.12.5 | 140 KB | ########## | 100% certifi-2020.12.5 | 140 KB | ########## | 100% vc-14.2 | 13 KB | | 0% vc-14.2 | 13 KB | ########## | 100% vc-14.2 | 13 KB | ########## | 100% python-3.6.13 | 18.9 MB | | 0% python-3.6.13 | 18.9 MB | 2 | 2% python-3.6.13 | 18.9 MB | # | 11% python-3.6.13 | 18.9 MB | ##1 | 22% python-3.6.13 | 18.9 MB | ##9 | 29% python-3.6.13 | 18.9 MB | ######7 | 67% python-3.6.13 | 18.9 MB | ########## | 100% python-3.6.13 | 18.9 MB | ########## | 100% python_abi-3.6 | 4 KB | | 0% python_abi-3.6 | 4 KB | ########## | 100% python_abi-3.6 | 4 KB | ########## | 100% libcblas-3.9.0 | 4.5 MB | | 0% libcblas-3.9.0 | 4.5 MB | 5 | 6% libcblas-3.9.0 | 4.5 MB | ####2 | 43% libcblas-3.9.0 | 4.5 MB | ########## | 100% libcblas-3.9.0 | 4.5 MB | ########## | 100% mkl-2021.3.0 | 179.7 MB | | 0% mkl-2021.3.0 | 179.7 MB | | 0% mkl-2021.3.0 | 179.7 MB | 1 | 2% mkl-2021.3.0 | 179.7 MB | 4 | 4% mkl-2021.3.0 | 179.7 MB | 8 | 8% mkl-2021.3.0 | 179.7 MB | #2 | 13% mkl-2021.3.0 | 179.7 MB | #6 | 16% mkl-2021.3.0 | 179.7 MB | ## | 21% mkl-2021.3.0 | 179.7 MB | ##6 | 26% mkl-2021.3.0 | 179.7 MB | ### | 30% mkl-2021.3.0 | 179.7 MB | ###6 | 36% mkl-2021.3.0 | 179.7 MB | #### | 41% mkl-2021.3.0 | 179.7 MB | ####5 | 45% mkl-2021.3.0 | 179.7 MB | ####9 | 49% mkl-2021.3.0 | 179.7 MB | #####2 | 53% mkl-2021.3.0 | 179.7 MB | #####6 | 57% mkl-2021.3.0 | 179.7 MB | ######1 | 61% mkl-2021.3.0 | 179.7 MB | ######5 | 65% mkl-2021.3.0 | 179.7 MB | ######8 | 69% mkl-2021.3.0 | 179.7 MB | #######3 | 73% mkl-2021.3.0 | 179.7 MB | #######8 | 78% mkl-2021.3.0 | 179.7 MB | ########4 | 84% mkl-2021.3.0 | 179.7 MB | ########8 | 88% mkl-2021.3.0 | 179.7 MB | #########2 | 93% mkl-2021.3.0 | 179.7 MB | #########6 | 97% mkl-2021.3.0 | 179.7 MB | ########## | 100% setuptools-49.6.0 | 921 KB | | 0% setuptools-49.6.0 | 921 KB | ##9 | 30% setuptools-49.6.0 | 921 KB | ########## | 100% setuptools-49.6.0 | 921 KB | ########## | 100% pip-21.3 | 1.2 MB | | 0% pip-21.3 | 1.2 MB | ##4 | 25% pip-21.3 | 1.2 MB | ########## | 100% pip-21.3 | 1.2 MB | ########## | 100% wheel-0.37.0 | 31 KB | | 0% wheel-0.37.0 | 31 KB | ########## | 100% wheel-0.37.0 | 31 KB | ########## | 100% intel-openmp-2021.4. | 3.2 MB | | 0% intel-openmp-2021.4. | 3.2 MB | # | 11% intel-openmp-2021.4. | 3.2 MB | ######### | 91% intel-openmp-2021.4. | 3.2 MB | ########## | 100% numpy-1.19.5 | 4.9 MB | | 0% numpy-1.19.5 | 4.9 MB | 7 | 7% numpy-1.19.5 | 4.9 MB | #####7 | 58% numpy-1.19.5 | 4.9 MB | ########## | 100% numpy-1.19.5 | 4.9 MB | ########## | 100% tbb-2021.3.0 | 143 KB | | 0% tbb-2021.3.0 | 143 KB | ########## | 100% tbb-2021.3.0 | 143 KB | ########## | 100% vs2015_runtime-14.29 | 1.3 MB | | 0% vs2015_runtime-14.29 | 1.3 MB | #9 | 20% vs2015_runtime-14.29 | 1.3 MB | ########## | 100% vs2015_runtime-14.29 | 1.3 MB | ########## | 100% wincertstore-0.2 | 15 KB | | 0% wincertstore-0.2 | 15 KB | ########## | 100% wincertstore-0.2 | 15 KB | ########## | 100% liblapack-3.9.0 | 4.5 MB | | 0% liblapack-3.9.0 | 4.5 MB | 6 | 6% liblapack-3.9.0 | 4.5 MB | ####3 | 44% liblapack-3.9.0 | 4.5 MB | ########## | 100% liblapack-3.9.0 | 4.5 MB | ########## | 100% Preparing transaction: ...working... done Verifying transaction: ...working... done Executing transaction: ...working... done # # To activate this environment, use # # $ conda activate r-reticulate # # To deactivate an active environment, use # # $ conda deactivate [ FAIL 0 | WARN 2 | SKIP 0 | PASS 3 ] > > proc.time() user system elapsed 2.34 2.26 538.53 |
Herper.Rcheck/examples_i386/Herper-Ex.timings
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Herper.Rcheck/examples_x64/Herper-Ex.timings
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