Multiple platform build/check report for BioC 3.10 - INSTALL report for waddR on tokay1

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### Running command:
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###   C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.10/bioc/src/contrib/waddR_1.0.1.tar.gz && rm -rf waddR.buildbin-libdir && mkdir waddR.buildbin-libdir && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=waddR.buildbin-libdir waddR_1.0.1.tar.gz && C:\Users\biocbuild\bbs-3.10-bioc\R\bin\R.exe CMD INSTALL waddR_1.0.1.zip && rm waddR_1.0.1.tar.gz waddR_1.0.1.zip
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install for i386

* installing *source* package 'waddR' ...
** using staged installation
** libs
C:/Rtools/mingw_32/bin/g++  -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG  -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/Rcpp/include" -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/RcppArmadillo/include"   -I"C:/extsoft/include"     -O2 -Wall  -mtune=core2 -c RcppExports.cpp -o RcppExports.o
C:/Rtools/mingw_32/bin/g++  -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG  -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/Rcpp/include" -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/RcppArmadillo/include"   -I"C:/extsoft/include"     -O2 -Wall  -mtune=core2 -c wasserstein.cpp -o wasserstein.o
wasserstein.cpp: In function 'std::vector<double> rep_weighted(std::vector<double>, std::vector<int, std::allocator<int> >)':
wasserstein.cpp:348:20: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
      for(int i=0; i<x.size(); i++) {
                    ^
wasserstein.cpp: In function 'std::vector<int, std::allocator<int> > interval_table(const std::vector<double>&, const std::vector<double>&, int)':
wasserstein.cpp:584:18: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
    while (data_i < datavec.size()) {
                  ^
wasserstein.cpp: In function 'double cor_test_export(Rcpp::NumericVector, Rcpp::NumericVector)':
wasserstein.cpp:1094:17: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
  for (int i=0; i<x.size(); i++) { x[i] = x_[i];}
                 ^
wasserstein.cpp:1095:17: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
  for (int j=0; j<y.size(); j++) { y[j] = y_[j];}
                 ^
wasserstein.cpp: In instantiation of 'double cor(const std::vector<_RealType>&, const std::vector<_RealType>&, double, double) [with T = double]':
wasserstein.cpp:720:49:   required from here
wasserstein.cpp:439:17: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
  for (int i=0; i<x.size(); i++){
                 ^
wasserstein.cpp: In instantiation of 'std::vector<_RealType> operator-(const std::vector<_RealType>&, const std::vector<_RealType>&) [with T = double]':
wasserstein.cpp:782:44:   required from here
wasserstein.cpp:121:20: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for (int i=0; i<x.size(); i++) {
                    ^
wasserstein.cpp: In instantiation of 'std::vector<_RealType> cumSum(const std::vector<_RealType>&, int) [with T = double]':
wasserstein.cpp:890:17:   required from here
wasserstein.cpp:472:47: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
  int upper = ((last_index > 0) && (last_index <= x.size()) 
                                               ^
wasserstein.cpp: In instantiation of 'std::vector<_RealType> operator*(const std::vector<_RealType>&, const std::vector<_RealType>&) [with T = double]':
wasserstein.cpp:918:62:   required from here
wasserstein.cpp:101:20: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for (int i=0; i<x.size(); i++) {
                    ^
wasserstein.cpp: In instantiation of 'std::vector<_RealType> operator+(std::vector<_RealType>, std::vector<_RealType>) [with T = double]':
wasserstein.cpp:939:15:   required from here
wasserstein.cpp:53:18: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for (int i=0; i<x.size(); i++) {
                  ^
wasserstein.cpp: In instantiation of 'std::vector<_RealType> operator/(const std::vector<_RealType>&, const std::vector<_RealType>&) [with T = double]':
wasserstein.cpp:1052:15:   required from here
wasserstein.cpp:169:20: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for (int i=0; i<x.size(); i++) {
                    ^
wasserstein.cpp: In instantiation of 'std::vector<_RealType> quantile(const std::vector<_RealType>&, std::vector<double>, int) [with T = double]':
wasserstein.cpp:1168:27:   required from here
wasserstein.cpp:501:4: warning: unused variable 'max_x' [-Wunused-variable]
  T max_x = x_sorted[n-1];
    ^
C:/Rtools/mingw_32/bin/g++ -shared -s -static-libgcc -o waddR.dll tmp.def RcppExports.o wasserstein.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.10-/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.10-bioc/meat/waddR.buildbin-libdir/00LOCK-waddR/00new/waddR/libs/i386
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'waddR'
    finding HTML links ... done
    brownianBridgeEmpcdf.url                html  
    dot-brownianBridgeEmpcdf                html  
    dot-combinePVal                         html  
    dot-fishersCombinedPval                 html  
    dot-quantileCorrelation                 html  
    dot-relativeError                       html  
    dot-testWass                            html  
    dot-wassPermProcedure                   html  
    dot-wassersteinTestAsy                  html  
    dot-wassersteinTestSp                   html  
    permutations                            html  
    squared_wass_approx                     html  
    squared_wass_decomp                     html  
    testZeroes-method                       html  
    waddR-package                           html  
    wasserstein.sc-method                   html  
    wasserstein.test                        html  
    wasserstein_metric                      html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'waddR' ...
** libs
C:/Rtools/mingw_64/bin/g++  -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG  -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/Rcpp/include" -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/RcppArmadillo/include"   -I"C:/extsoft/include"     -O2 -Wall  -mtune=core2 -c RcppExports.cpp -o RcppExports.o
C:/Rtools/mingw_64/bin/g++  -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.10-/R/include" -DNDEBUG  -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/Rcpp/include" -I"C:/Users/biocbuild/bbs-3.10-bioc/R/library/RcppArmadillo/include"   -I"C:/extsoft/include"     -O2 -Wall  -mtune=core2 -c wasserstein.cpp -o wasserstein.o
wasserstein.cpp: In function 'std::vector<double> rep_weighted(std::vector<double>, std::vector<int, std::allocator<int> >)':
wasserstein.cpp:348:20: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
      for(int i=0; i<x.size(); i++) {
                    ^
wasserstein.cpp: In function 'std::vector<int, std::allocator<int> > interval_table(const std::vector<double>&, const std::vector<double>&, int)':
wasserstein.cpp:584:18: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
    while (data_i < datavec.size()) {
                  ^
wasserstein.cpp: In function 'double cor_test_export(Rcpp::NumericVector, Rcpp::NumericVector)':
wasserstein.cpp:1094:17: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
  for (int i=0; i<x.size(); i++) { x[i] = x_[i];}
                 ^
wasserstein.cpp:1095:17: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
  for (int j=0; j<y.size(); j++) { y[j] = y_[j];}
                 ^
wasserstein.cpp: In instantiation of 'double cor(const std::vector<_RealType>&, const std::vector<_RealType>&, double, double) [with T = double]':
wasserstein.cpp:720:49:   required from here
wasserstein.cpp:439:17: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
  for (int i=0; i<x.size(); i++){
                 ^
wasserstein.cpp: In instantiation of 'std::vector<_RealType> operator-(const std::vector<_RealType>&, const std::vector<_RealType>&) [with T = double]':
wasserstein.cpp:782:44:   required from here
wasserstein.cpp:121:20: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for (int i=0; i<x.size(); i++) {
                    ^
wasserstein.cpp: In instantiation of 'std::vector<_RealType> cumSum(const std::vector<_RealType>&, int) [with T = double]':
wasserstein.cpp:890:17:   required from here
wasserstein.cpp:472:47: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
  int upper = ((last_index > 0) && (last_index <= x.size()) 
                                               ^
wasserstein.cpp: In instantiation of 'std::vector<_RealType> operator*(const std::vector<_RealType>&, const std::vector<_RealType>&) [with T = double]':
wasserstein.cpp:918:62:   required from here
wasserstein.cpp:101:20: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for (int i=0; i<x.size(); i++) {
                    ^
wasserstein.cpp: In instantiation of 'std::vector<_RealType> operator+(std::vector<_RealType>, std::vector<_RealType>) [with T = double]':
wasserstein.cpp:939:15:   required from here
wasserstein.cpp:53:18: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
   for (int i=0; i<x.size(); i++) {
                  ^
wasserstein.cpp: In instantiation of 'std::vector<_RealType> operator/(const std::vector<_RealType>&, const std::vector<_RealType>&) [with T = double]':
wasserstein.cpp:1052:15:   required from here
wasserstein.cpp:169:20: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
     for (int i=0; i<x.size(); i++) {
                    ^
wasserstein.cpp: In instantiation of 'std::vector<_RealType> quantile(const std::vector<_RealType>&, std::vector<double>, int) [with T = double]':
wasserstein.cpp:1168:27:   required from here
wasserstein.cpp:501:4: warning: unused variable 'max_x' [-Wunused-variable]
  T max_x = x_sorted[n-1];
    ^
C:/Rtools/mingw_64/bin/g++ -shared -s -static-libgcc -o waddR.dll tmp.def RcppExports.o wasserstein.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.10-/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.10-bioc/meat/waddR.buildbin-libdir/waddR/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'waddR' as waddR_1.0.1.zip
* DONE (waddR)
* installing to library 'C:/Users/biocbuild/bbs-3.10-bioc/R/library'
package 'waddR' successfully unpacked and MD5 sums checked
INSTALL report for waddR on tokay1

Summary

Command output
