Back to the "Multiple platform build/check report" A  B  C  D  E  F [G] H  I  J  K  L  M  N  O  P  Q  R  S  T  U  V  W  X  Y  Z 

Package 237/516HostnameOS / ArchBUILDCHECKBUILD BIN
GSVA 1.2.4
Justin Guinney
Snapshot Date: 2012-01-08 18:22:44 -0800 (Sun, 08 Jan 2012)
URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_9/madman/Rpacks/GSVA
Last Changed Rev: 61398 / Revision: 61898
Last Changed Date: 2011-12-16 01:46:22 -0800 (Fri, 16 Dec 2011)
wilson2 Linux (openSUSE 11.4) / x86_64  OK  OK 
liverpool Windows Server 2003 R2 (32-bit) / x64  OK  OK  OK 
gewurz Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK  OK [ OK ]
moscato1 Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64  OK  OK  OK 
pitt Mac OS X Leopard (10.5.8) / i386  OK  OK  OK 

Summary

Package: GSVA
Version: 1.2.4
Command: rm -rf GSVA.buildbin-libdir && mkdir GSVA.buildbin-libdir && D:\biocbld\bbs-2.9-bioc\R\bin\R.exe CMD INSTALL --build --no-multiarch --library=GSVA.buildbin-libdir GSVA_1.2.4.tar.gz
StartedAt: 2012-01-09 06:37:33 -0800 (Mon, 09 Jan 2012)
EndedAt: 2012-01-09 06:37:47 -0800 (Mon, 09 Jan 2012)
EllapsedTime: 14.0 seconds
RetCode: 0
Status:  OK  
PackageFile: GSVA_1.2.4.zip
PackageFileSize: 1.874 MiB

Command output

* installing *source* package 'GSVA' ...

   **********************************************
   WARNING: this package has a configure script
         It probably needs manual configuration
   **********************************************


** libs
x86_64-w64-mingw32-gcc  -I"D:/biocbld/bbs-2.9-bioc/R/include"       -I/src/include -IC:/GSL/x64/include   -O2 -Wall  -std=gnu99 -mtune=core2 -c assess_density_test.c -o assess_density_test.o
x86_64-w64-mingw32-gcc  -I"D:/biocbld/bbs-2.9-bioc/R/include"       -I/src/include -IC:/GSL/x64/include   -O2 -Wall  -std=gnu99 -mtune=core2 -c ks_test.c -o ks_test.o
ks_test.c: In function 'ks_sample':
ks_test.c:22:9: warning: unused variable 'mx_value'
x86_64-w64-mingw32-gcc  -I"D:/biocbld/bbs-2.9-bioc/R/include"       -I/src/include -IC:/GSL/x64/include   -O2 -Wall  -std=gnu99 -mtune=core2 -c register_cmethods.c -o register_cmethods.o
x86_64-w64-mingw32-gcc -shared -s -static-libgcc -o GSVA.dll tmp.def assess_density_test.o ks_test.o register_cmethods.o -LC:/GSL/x64/lib -lgsl -lgslcblas -lm -LD:/biocbld/bbs-2.9-bioc/R/bin/x64 -lR
installing to D:/biocbld/bbs-2.9-bioc/meat/GSVA.buildbin-libdir/GSVA/libs/x64
** R
** inst
** preparing package for lazy loading
Warning in .simpleDuplicateClass(def, prev) :
  A specification for S3 class "connection" in package 'graph' seems equivalent to one from package 'IRanges' and is not turning on duplicate class definitions for this class
Warning in .simpleDuplicateClass(def, prev) :
  A specification for S3 class "file" in package 'graph' seems equivalent to one from package 'IRanges' and is not turning on duplicate class definitions for this class
** help
*** installing help indices
** building package indices ...
*** tangling vignette sources ...
   'GSVA.Rnw' 
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'GSVA' as GSVA_1.2.4.zip

* DONE (GSVA)