GSVA 1.2.4
Justin Guinney
| Snapshot Date: 2012-03-23 18:21:46 -0700 (Fri, 23 Mar 2012) | | URL: https://hedgehog.fhcrc.org/bioconductor/branches/RELEASE_2_9/madman/Rpacks/GSVA | | Last Changed Rev: 61398 / Revision: 64395 | | Last Changed Date: 2011-12-16 01:46:22 -0800 (Fri, 16 Dec 2011) |
| wilson2 | Linux (openSUSE 11.4) / x86_64 | OK | OK | |
| moscato1 | Windows Server 2008 R2 Enterprise SP1 (64-bit) / x64 | OK | OK | [ OK ] |
| pitt | Mac OS X Leopard (10.5.8) / i386 | OK | OK | OK |
install for i386
* installing *source* package 'GSVA' ...
**********************************************
WARNING: this package has a configure script
It probably needs manual configuration
**********************************************
** libs
gcc -I"D:/biocbld/BBS-2˜1.9-B/R/include" -I/src/include -IC:/GSL/i386/include -O3 -Wall -std=gnu99 -mtune=core2 -c assess_density_test.c -o assess_density_test.o
gcc -I"D:/biocbld/BBS-2˜1.9-B/R/include" -I/src/include -IC:/GSL/i386/include -O3 -Wall -std=gnu99 -mtune=core2 -c ks_test.c -o ks_test.o
ks_test.c: In function 'ks_sample':
ks_test.c:22:9: warning: unused variable 'mx_value' [-Wunused-variable]
gcc -I"D:/biocbld/BBS-2˜1.9-B/R/include" -I/src/include -IC:/GSL/i386/include -O3 -Wall -std=gnu99 -mtune=core2 -c register_cmethods.c -o register_cmethods.o
gcc -shared -s -static-libgcc -o GSVA.dll tmp.def assess_density_test.o ks_test.o register_cmethods.o -LC:/GSL/i386/lib -lgsl -lgslcblas -lm -LD:/biocbld/BBS-2˜1.9-B/R/bin/i386 -lR
installing to D:/biocbld/bbs-2.9-bioc/meat/GSVA.buildbin-libdir/GSVA/libs/i386
** R
** inst
** preparing package for lazy loading
Warning in .simpleDuplicateClass(def, prev) :
A specification for S3 class "connection" in package 'graph' seems equivalent to one from package 'IRanges' and is not turning on duplicate class definitions for this class
Warning in .simpleDuplicateClass(def, prev) :
A specification for S3 class "file" in package 'graph' seems equivalent to one from package 'IRanges' and is not turning on duplicate class definitions for this class
** help
*** installing help indices
** building package indices ...
*** tangling vignette sources ...
'GSVA.Rnw'
** testing if installed package can be loaded
add DLL for x64
* installing *source* package 'GSVA' ...
**********************************************
WARNING: this package has a configure script
It probably needs manual configuration
**********************************************
** libs
gcc -m64 -I"D:/biocbld/BBS-2˜1.9-B/R/include" -I"d:/RCompile/CRANpkg/extralibs64/local/include" -I/src/include -IC:/GSL/x64/include -O2 -Wall -std=gnu99 -mtune=core2 -c assess_density_test.c -o assess_density_test.o
gcc -m64 -I"D:/biocbld/BBS-2˜1.9-B/R/include" -I"d:/RCompile/CRANpkg/extralibs64/local/include" -I/src/include -IC:/GSL/x64/include -O2 -Wall -std=gnu99 -mtune=core2 -c ks_test.c -o ks_test.o
ks_test.c: In function 'ks_sample':
ks_test.c:22:9: warning: unused variable 'mx_value' [-Wunused-variable]
gcc -m64 -I"D:/biocbld/BBS-2˜1.9-B/R/include" -I"d:/RCompile/CRANpkg/extralibs64/local/include" -I/src/include -IC:/GSL/x64/include -O2 -Wall -std=gnu99 -mtune=core2 -c register_cmethods.c -o register_cmethods.o
gcc -m64 -shared -s -static-libgcc -o GSVA.dll tmp.def assess_density_test.o ks_test.o register_cmethods.o -LC:/GSL/x64/lib -lgsl -lgslcblas -lm -Ld:/RCompile/CRANpkg/extralibs64/local/lib/x64 -Ld:/RCompile/CRANpkg/extralibs64/local/lib -LD:/biocbld/BBS-2˜1.9-B/R/bin/x64 -lR
installing to D:/biocbld/bbs-2.9-bioc/meat/GSVA.buildbin-libdir/GSVA/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'GSVA' as GSVA_1.2.4.zip
* DONE (GSVA)