Package: phenoTest

Version: 1.1.1

Command: chmod a+r phenoTest -R && D:\biocbld\bbs-2.9-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data phenoTest

StartedAt: 2011-07-07 03:44:56 -0700 (Thu, 07 Jul 2011)

EndedAt: 2011-07-07 03:45:24 -0700 (Thu, 07 Jul 2011)

EllapsedTime: 28.0 seconds

RetCode: 1

Status:  ERROR

PackageFile: None

PackageFileSize: NA

* checking for file 'phenoTest/DESCRIPTION' ... OK
* preparing 'phenoTest':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to re-build vignettes
      -----------------------------------
* installing *source* package 'phenoTest' ...
** libs
gcc  -I"D:/biocbld/BBS-2˜1.9-B/R/include"          -O3 -Wall  -std=gnu99 -mtune=core2 -c getEs.c -o getEs.o
gcc -shared -s -static-libgcc -o phenoTest.dll tmp.def getEs.o -LD:/biocbld/BBS-2˜1.9-B/R/bin/i386 -lR
installing to D:/biocbld/bbs-2.9-bioc/tmpdir/RtmpS28JjU/Rinst6ff6159e/phenoTest/libs/i386
** R
** data
** inst
** preparing package for lazy loading

Welcome to Bioconductor

  Vignettes contain introductory material. To view, type
  'browseVignettes()'. To cite Bioconductor, see
  'citation("Biobase")' and for packages 'citation("pkgname")'.

Loading required package: AnnotationDbi
Loading required package: DBI

** help
*** installing help indices
** building package indices ...
*** tangling vignette sources ...
   'phenoTest.Rnw' 
** testing if installed package can be loaded
Error in namespaceExport(ns, exports) : 
  undefined exports: getEsPositions, findCopyNumber, genesInArea
Error: loading failed
Execution halted
ERROR: loading failed
* removing 'D:/biocbld/bbs-2.9-bioc/tmpdir/RtmpS28JjU/Rinst6ff6159e/phenoTest'
      -----------------------------------
ERROR: package installation failed