Package: Bioconductor

Version: 1.1.9

Command: D:\biocbld\bbs-2.9-bioc\R\bin\R.exe CMD check --force-multiarch --no-vignettes --timings Bioconductor_1.1.9.tar.gz

StartedAt: 2011-06-14 14:22:08 -0700 (Tue, 14 Jun 2011)

EndedAt: 2011-06-14 14:22:22 -0700 (Tue, 14 Jun 2011)

EllapsedTime: 14.1 seconds

RetCode: 0

Status:  OK

CheckDir: Bioconductor.Rcheck

Warnings: 0

* using log directory 'D:/biocbld/bbs-2.9-bioc/meat/Bioconductor.Rcheck'
* using R version 2.14.0 Under development (unstable) (2011-05-30 r56020)
* using platform: i386-pc-mingw32 (32-bit)
* using session charset: ISO8859-1
* using option '--no-vignettes'
* checking for file 'Bioconductor/DESCRIPTION' ... OK
* this is package 'Bioconductor' version '1.1.9'
* checking package name space information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking whether package 'Bioconductor' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* loading checks for arch 'i386'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the name space can be loaded with stated dependencies ... OK
** checking whether the name space can be unloaded cleanly ... OK
* loading checks for arch 'x64'
** checking whether the package can be loaded ... OK
** checking whether the package can be loaded with stated dependencies ... OK
** checking whether the package can be unloaded cleanly ... OK
** checking whether the name space can be loaded with stated dependencies ... OK
** checking whether the name space can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
updateBioconductorPackage : bootstrap: no visible binding for global
  variable 'contribUrl'
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking examples ...
** running examples for arch 'i386' ... OK
** running examples for arch 'x64' ... OK
* checking PDF version of manual ... OK

* installing *source* package 'Bioconductor' ...
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices ...
** testing if installed package can be loaded
Bioconductor package version 1.1.9 loaded, type ?biocLite for help

* DONE (Bioconductor)

name	user	system	elapsed
biocLite	0.03	0.00	0.03
biocinstallRepos	0	0	0