GSEAlm

This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see GSEAlm.

Linear Model Toolset for Gene Set Enrichment Analysis

Bioconductor version: 3.9

Models and methods for fitting linear models to gene expression data, together with tools for computing and using various regression diagnostics.

Author: Assaf Oron, Robert Gentleman (with contributions from S. Falcon and Z. Jiang)

Maintainer: Assaf Oron <assaf at uw.edu>

Citation (from within R, enter citation("GSEAlm")):

To install this package, start R (version "3.6") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("GSEAlm")

For older versions of R, please refer to the appropriate Bioconductor release.

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("GSEAlm")

Linear models in GSEA	PDF	R Script
Reference Manual	PDF

Suggests	GSEABase, Category, multtest, ALL, annotate, hgu95av2.db, genefilter, GOstats, RColorBrewer
Linking To
Enhances
Depends On Me
Imports Me	gCMAP
Suggests Me
Links To Me
Build Report	Build Report

Follow Installation instructions to use this package in your R session.

Source Package	GSEAlm_1.44.0.tar.gz
Windows Binary	GSEAlm_1.44.0.zip
Mac OS X 10.11 (El Capitan)	GSEAlm_1.44.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/GSEAlm
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/GSEAlm
Bioc Package Browser	https://code.bioconductor.org/browse/GSEAlm/
Package Short Url	https://bioconductor.org/packages/GSEAlm/
Package Downloads Report	Download Stats
Old Source Packages for BioC 3.9	Source Archive