flowPeaks
This package is for version 3.7 of Bioconductor; for the stable, up-to-date release version, see flowPeaks.
An R package for flow data clustering
Bioconductor version: 3.7
A fast and automatic clustering to classify the cells into subpopulations based on finding the peaks from the overall density function generated by K-means.
Author: Yongchao Ge<yongchao.ge at gmail.com>
Maintainer: Yongchao Ge<yongchao.ge at gmail.com>
Citation (from within R, enter
citation("flowPeaks")
):
Installation
To install this package, start R (version "3.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("flowPeaks")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("flowPeaks")
Tutorial of flowPeaks package | R Script | |
Reference Manual | ||
README | Text |
Details
biocViews | Clustering, FlowCytometry, Gating, Software |
Version | 1.26.0 |
In Bioconductor since | BioC 2.11 (R-2.15) (11.5 years) |
License | Artistic-1.0 |
Depends | R (>= 2.12.0) |
Imports | |
System Requirements | gsl |
URL |
See More
Suggests | |
Linking To | |
Enhances | flowCore |
Depends On Me | |
Imports Me | CONFESS, ddPCRclust |
Suggests Me | |
Links To Me | |
Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
Source Package | flowPeaks_1.26.0.tar.gz |
Windows Binary | flowPeaks_1.26.0.zip (32- & 64-bit) |
Mac OS X 10.11 (El Capitan) | flowPeaks_1.26.0.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/flowPeaks |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/flowPeaks |
Package Short Url | https://bioconductor.org/packages/flowPeaks/ |
Package Downloads Report | Download Stats |
Old Source Packages for BioC 3.7 | Source Archive |