affyio
This package is for version 3.7 of Bioconductor; for the stable, up-to-date release version, see affyio.
Tools for parsing Affymetrix data files
Bioconductor version: 3.7
Routines for parsing Affymetrix data files based upon file format information. Primary focus is on accessing the CEL and CDF file formats.
Author: Ben Bolstad <bmb at bmbolstad.com>
Maintainer: Ben Bolstad <bmb at bmbolstad.com>
Citation (from within R, enter
citation("affyio")
):
Installation
To install this package, start R (version "3.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("affyio")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
Reference Manual |
Details
biocViews | DataImport, Infrastructure, Microarray, Software |
Version | 1.50.0 |
In Bioconductor since | BioC 1.8 (R-2.3) (18 years) |
License | LGPL (>= 2) |
Depends | R (>= 2.6.0) |
Imports | zlibbioc, methods |
System Requirements | |
URL | https://github.com/bmbolstad/affyio |
See More
Suggests | |
Linking To | |
Enhances | |
Depends On Me | affyPara, makecdfenv, SCAN.UPC, sscore |
Imports Me | affy, affylmGUI, crlmm, ExiMiR, gcrma, oligo, oligoClasses, puma |
Suggests Me | BufferedMatrixMethods |
Links To Me | |
Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
Source Package | affyio_1.50.0.tar.gz |
Windows Binary | affyio_1.50.0.zip (32- & 64-bit) |
Mac OS X 10.11 (El Capitan) | affyio_1.50.0.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/affyio |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/affyio |
Package Short Url | https://bioconductor.org/packages/affyio/ |
Package Downloads Report | Download Stats |
Old Source Packages for BioC 3.7 | Source Archive |