biodbMirbase
This package is for version 3.18 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see biodbMirbase.
biodbMirbase, a library for connecting to miRBase mature database
Bioconductor version: 3.18
The biodbMirbase library is an extension of the biodb framework package, that provides access to miRBase mature database. It allows to retrieve entries by their accession number, and run specific web services. Description: The biodbMirbase library provides access to the miRBase Database, using biodb package framework.
Author: Pierrick Roger [aut, cre] 
Maintainer: Pierrick Roger <pierrick.roger at cea.fr>
citation("biodbMirbase")):
Installation
To install this package, start R (version "4.3") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("biodbMirbase")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("biodbMirbase")| Introduction to the biodbMirbase package. | HTML | R Script |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | DataImport, Infrastructure, Software |
| Version | 1.5.0 |
| In Bioconductor since | BioC 3.15 (R-4.2) (2 years) |
| License | AGPL-3 |
| Depends | R (>= 4.1) |
| Imports | biodb(>= 1.3.1), R6, stringr, chk |
| System Requirements | |
| URL |
See More
| Suggests | roxygen2, BiocStyle, testthat (>= 2.0.0), devtools, knitr, rmarkdown, covr, lgr |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | biodbMirbase_1.5.0.tar.gz |
| Windows Binary | biodbMirbase_1.5.0.zip |
| macOS Binary (x86_64) | biodbMirbase_1.5.0.tgz |
| macOS Binary (arm64) | biodbMirbase_1.5.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/biodbMirbase |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/biodbMirbase |
| Bioc Package Browser | https://code.bioconductor.org/browse/biodbMirbase/ |
| Package Short Url | https://bioconductor.org/packages/biodbMirbase/ |
| Package Downloads Report | Download Stats |