Back to Build/check report for BioC 3.20 experimental data |
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This page was generated on 2024-12-10 15:42 -0500 (Tue, 10 Dec 2024).
Hostname | OS | Arch (*) | R version | Installed pkgs |
---|---|---|---|---|
nebbiolo2 | Linux (Ubuntu 24.04.1 LTS) | x86_64 | 4.4.2 (2024-10-31) -- "Pile of Leaves" | 4739 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
Package 42/431 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | ||||||||
bronchialIL13 1.44.0 (landing page) Vince Carey
| nebbiolo2 | Linux (Ubuntu 24.04.1 LTS) / x86_64 | OK | OK | OK | ||||||||
To the developers/maintainers of the bronchialIL13 package: - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
Package: bronchialIL13 |
Version: 1.44.0 |
Command: /home/biocbuild/bbs-3.20-bioc/R/bin/R CMD check --install=check:bronchialIL13.install-out.txt --library=/home/biocbuild/bbs-3.20-bioc/R/site-library --timings bronchialIL13_1.44.0.tar.gz |
StartedAt: 2024-12-10 11:51:48 -0500 (Tue, 10 Dec 2024) |
EndedAt: 2024-12-10 11:55:51 -0500 (Tue, 10 Dec 2024) |
EllapsedTime: 243.5 seconds |
RetCode: 0 |
Status: OK |
CheckDir: bronchialIL13.Rcheck |
Warnings: 0 |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.20-bioc/R/bin/R CMD check --install=check:bronchialIL13.install-out.txt --library=/home/biocbuild/bbs-3.20-bioc/R/site-library --timings bronchialIL13_1.44.0.tar.gz ### ############################################################################## ############################################################################## * using log directory ‘/home/biocbuild/bbs-3.20-data-experiment/meat/bronchialIL13.Rcheck’ * using R version 4.4.2 (2024-10-31) * using platform: x86_64-pc-linux-gnu * R was compiled by gcc (Ubuntu 13.2.0-23ubuntu4) 13.2.0 GNU Fortran (Ubuntu 13.2.0-23ubuntu4) 13.2.0 * running under: Ubuntu 24.04.1 LTS * using session charset: UTF-8 * checking for file ‘bronchialIL13/DESCRIPTION’ ... OK * this is package ‘bronchialIL13’ version ‘1.44.0’ * checking package namespace information ... OK * checking package dependencies ...Warning: unable to access index for repository https://CRAN.R-project.org/src/contrib: cannot open URL 'https://CRAN.R-project.org/src/contrib/PACKAGES' OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘bronchialIL13’ can be installed ... OK * checking installed package size ... NOTE installed size is 69.2Mb sub-directories of 1Mb or more: cel 53.5Mb data 15.7Mb * checking package directory ... OK * checking DESCRIPTION meta-information ... NOTE Malformed Description field: should contain one or more complete sentences. * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking examples ... OK * checking PDF version of manual ... OK * DONE Status: 2 NOTEs See ‘/home/biocbuild/bbs-3.20-data-experiment/meat/bronchialIL13.Rcheck/00check.log’ for details.
bronchialIL13.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.20-bioc/R/bin/R CMD INSTALL bronchialIL13 ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.20-bioc/R/site-library’ * installing *source* package ‘bronchialIL13’ ... ** using staged installation ** data ** inst ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (bronchialIL13)
bronchialIL13.Rcheck/bronchialIL13-Ex.timings
name | user | system | elapsed | |
il13tc | 0.060 | 0.008 | 0.069 | |