| Back to Build/check report for BioC 3.20 experimental data |
|
This page was generated on 2024-12-12 15:42 -0500 (Thu, 12 Dec 2024).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 24.04.1 LTS) | x86_64 | 4.4.2 (2024-10-31) -- "Pile of Leaves" | 4739 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 14/431 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | ||||||||
| antiProfilesData 1.42.0 (landing page) Hector Corrada Bravo
| nebbiolo2 | Linux (Ubuntu 24.04.1 LTS) / x86_64 | OK | OK | ERROR | ||||||||
|
To the developers/maintainers of the antiProfilesData package: - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: antiProfilesData |
| Version: 1.42.0 |
| Command: /home/biocbuild/bbs-3.20-bioc/R/bin/R CMD check --install=check:antiProfilesData.install-out.txt --library=/home/biocbuild/bbs-3.20-bioc/R/site-library --timings antiProfilesData_1.42.0.tar.gz |
| StartedAt: 2024-12-12 11:43:29 -0500 (Thu, 12 Dec 2024) |
| EndedAt: 2024-12-12 11:47:16 -0500 (Thu, 12 Dec 2024) |
| EllapsedTime: 227.0 seconds |
| RetCode: 1 |
| Status: ERROR |
| CheckDir: antiProfilesData.Rcheck |
| Warnings: NA |
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### Running command:
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### /home/biocbuild/bbs-3.20-bioc/R/bin/R CMD check --install=check:antiProfilesData.install-out.txt --library=/home/biocbuild/bbs-3.20-bioc/R/site-library --timings antiProfilesData_1.42.0.tar.gz
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* using log directory ‘/home/biocbuild/bbs-3.20-data-experiment/meat/antiProfilesData.Rcheck’
* using R version 4.4.2 (2024-10-31)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
gcc (Ubuntu 13.2.0-23ubuntu4) 13.2.0
GNU Fortran (Ubuntu 13.2.0-23ubuntu4) 13.2.0
* running under: Ubuntu 24.04.1 LTS
* using session charset: UTF-8
* checking for file ‘antiProfilesData/DESCRIPTION’ ... OK
* this is package ‘antiProfilesData’ version ‘1.42.0’
* checking package namespace information ... OK
* checking package dependencies ...Warning: unable to access index for repository https://CRAN.R-project.org/src/contrib:
cannot open URL 'https://CRAN.R-project.org/src/contrib/PACKAGES'
ERROR
Package suggested but not available: ‘GEOmetadb’
The suggested packages are required for a complete check.
Checking can be attempted without them by setting the environment
variable _R_CHECK_FORCE_SUGGESTS_ to a false value.
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
* DONE
Status: 1 ERROR
See
‘/home/biocbuild/bbs-3.20-data-experiment/meat/antiProfilesData.Rcheck/00check.log’
for details.