| Back to Rapid builds (Linux only) of a subset of BioC 3.21 Report updated every 6 hours |
This page was generated on 2025-04-01 06:08 -0400 (Tue, 01 Apr 2025).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| teran2 | Linux (Ubuntu 24.04.1 LTS) | x86_64 | R Under development (unstable) (2025-01-20 r87609) -- "Unsuffered Consequences" | 871 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 214/217 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | |||||||
| xcms 4.5.4 (landing page) Steffen Neumann
| teran2 | Linux (Ubuntu 24.04.1 LTS) / x86_64 | ERROR | ERROR | skipped | |||||||
|
To the developers/maintainers of the xcms package: - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: xcms |
| Version: 4.5.4 |
| Command: /home/rapidbuild/bbs-3.21-bioc-rapid/R/bin/R CMD build --keep-empty-dirs --no-resave-data xcms |
| StartedAt: 2025-04-01 06:08:07 -0400 (Tue, 01 Apr 2025) |
| EndedAt: 2025-04-01 06:08:08 -0400 (Tue, 01 Apr 2025) |
| EllapsedTime: 1.3 seconds |
| RetCode: 1 |
| Status: ERROR |
| PackageFile: None |
| PackageFileSize: NA |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/rapidbuild/bbs-3.21-bioc-rapid/R/bin/R CMD build --keep-empty-dirs --no-resave-data xcms ### ############################################################################## ############################################################################## * checking for file ‘xcms/DESCRIPTION’ ... OK cp: error writing '/tmp/RtmpNUlbW5/Rbuild289ac96380a53e/xcms/R/AllGenerics.R': No space left on device cp: error writing '/tmp/RtmpNUlbW5/Rbuild289ac96380a53e/xcms/R/DataClasses.R': No space left on device cp: error writing '/tmp/RtmpNUlbW5/Rbuild289ac96380a53e/xcms/R/functions-OnDiskMSnExp.R': No space left on device cp: error writing '/tmp/RtmpNUlbW5/Rbuild289ac96380a53e/xcms/R/do_findChromPeaks-functions.R': No space left on device cp: error writing '/tmp/RtmpNUlbW5/Rbuild289ac96380a53e/xcms/R/do_adjustRtime-functions.R': No space left on device cp: error writing '/tmp/RtmpNUlbW5/Rbuild289ac96380a53e/xcms/R/XcmsExperiment-functions.R': No space left on device cp: error writing '/tmp/RtmpNUlbW5/Rbuild289ac96380a53e/xcms/R/MsExperiment-functions.R': No space left on device cp: error writing '/tmp/RtmpNUlbW5/Rbuild289ac96380a53e/xcms/R/XcmsExperiment.R': No space left on device cp: error writing '/tmp/RtmpNUlbW5/Rbuild289ac96380a53e/xcms/R/functions-XChromatograms.R': No space left on device cp: error writing '/tmp/RtmpNUlbW5/Rbuild289ac96380a53e/xcms/R/functions-Params.R': No space left on device cp: error writing '/tmp/RtmpNUlbW5/Rbuild289ac96380a53e/xcms/R/functions-XCMSnExp.R': No space left on device cp: error writing '/tmp/RtmpNUlbW5/Rbuild289ac96380a53e/xcms/R/functions-XChromatogram.R': No space left on device cp: error writing '/tmp/RtmpNUlbW5/Rbuild289ac96380a53e/xcms/R/functions-xcmsSet.R': No space left on device cp: error writing '/tmp/RtmpNUlbW5/Rbuild289ac96380a53e/xcms/R/methods-Chromatogram.R': No space left on device cp: error writing '/tmp/RtmpNUlbW5/Rbuild289ac96380a53e/xcms/R/methods-XCMSnExp.R': No space left on device cp: error writing '/tmp/RtmpNUlbW5/Rbuild289ac96380a53e/xcms/R/methods-MChromatograms.R': No space left on device cp: error writing '/tmp/RtmpNUlbW5/Rbuild289ac96380a53e/xcms/R/methods-XChromatogram.R': No space left on device cp: error writing '/tmp/RtmpNUlbW5/Rbuild289ac96380a53e/xcms/R/Deprecated.R': No space left on device cp: error writing '/tmp/RtmpNUlbW5/Rbuild289ac96380a53e/xcms/R/MPI.R': No space left on device cp: error writing '/tmp/RtmpNUlbW5/Rbuild289ac96380a53e/xcms/R/MsExperiment.R': No space left on device cp: error writing '/tmp/RtmpNUlbW5/Rbuild289ac96380a53e/xcms/R/XcmsExperiment-plotting.R': No space left on device cp: error writing '/tmp/RtmpNUlbW5/Rbuild289ac96380a53e/xcms/R/c.R': No space left on device cp: error writing '/tmp/RtmpNUlbW5/Rbuild289ac96380a53e/xcms/R/cwTools.R': No space left on device cp: error writing '/tmp/RtmpNUlbW5/Rbuild289ac96380a53e/xcms/R/databases.R': No space left on device cp: error writing '/tmp/RtmpNUlbW5/Rbuild289ac96380a53e/xcms/R/do_groupChromPeaks-functions.R': No space left on device cp: error writing '/tmp/RtmpNUlbW5/Rbuild289ac96380a53e/xcms/R/fastMatch.R': No space left on device cp: error writing '/tmp/RtmpNUlbW5/Rbuild289ac96380a53e/xcms/R/functions-Chromatogram.R': No space left on device cp: error writing '/tmp/RtmpNUlbW5/Rbuild289ac96380a53e/xcms/R/functions-IO.R': No space left on device cp: error writing '/tmp/RtmpNUlbW5/Rbuild289ac96380a53e/xcms/R/functions-MsFeatureData.R': No space left on device cp: error writing '/tmp/RtmpNUlbW5/Rbuild289ac96380a53e/xcms/R/functions-ProcessHistory.R': No space left on device cp: error writing '/tmp/RtmpNUlbW5/Rbuild289ac96380a53e/xcms/R/functions-binning.R': No space left on device cp: error writing '/tmp/RtmpNUlbW5/Rbuild289ac96380a53e/xcms/R/functions-imputation.R': No space left on device cp: error writing '/tmp/RtmpNUlbW5/Rbuild289ac96380a53e/xcms/R/functions-utils.R': No space left on device cp: error writing '/tmp/RtmpNUlbW5/Rbuild289ac96380a53e/xcms/R/functions-xcmsEIC.R': No space left on device cp: error writing '/tmp/RtmpNUlbW5/Rbuild289ac96380a53e/xcms/R/functions-xcmsFragments.R': No space left on device cp: error writing '/tmp/RtmpNUlbW5/Rbuild289ac96380a53e/xcms/R/functions-xcmsRaw.R': No space left on device cp: error writing '/tmp/RtmpNUlbW5/Rbuild289ac96380a53e/xcms/R/functions-xcmsSwath.R': No space left on device cp: error writing '/tmp/RtmpNUlbW5/Rbuild289ac96380a53e/xcms/R/init.R': No space left on device cp: error writing '/tmp/RtmpNUlbW5/Rbuild289ac96380a53e/xcms/R/loadXcmsData.R': No space left on device cp: error writing '/tmp/RtmpNUlbW5/Rbuild289ac96380a53e/xcms/R/matchpeaks.R': No space left on device cp: error writing '/tmp/RtmpNUlbW5/Rbuild289ac96380a53e/xcms/R/method-filterFeatures.R': No space left on device cp: error writing '/tmp/RtmpNUlbW5/Rbuild289ac96380a53e/xcms/R/methods-IO.R': No space left on device cp: error writing '/tmp/RtmpNUlbW5/Rbuild289ac96380a53e/xcms/R/methods-MsFeatureData.R': No space left on device cp: error writing '/tmp/RtmpNUlbW5/Rbuild289ac96380a53e/xcms/R/methods-OnDiskMSnExp.R': No space left on device cp: error writing '/tmp/RtmpNUlbW5/Rbuild289ac96380a53e/xcms/R/methods-Params.R': No space left on device cp: error writing '/tmp/RtmpNUlbW5/Rbuild289ac96380a53e/xcms/R/methods-ProcessHistory.R': No space left on device cp: error writing '/tmp/RtmpNUlbW5/Rbuild289ac96380a53e/xcms/R/methods-XChromatograms.R': No space left on device cp: error writing '/tmp/RtmpNUlbW5/Rbuild289ac96380a53e/xcms/R/methods-group-features.R': No space left on device cp: error writing '/tmp/RtmpNUlbW5/Rbuild289ac96380a53e/xcms/R/methods-xcmsEIC.R': No space left on device cp: error writing '/tmp/RtmpNUlbW5/Rbuild289ac96380a53e/xcms/R/methods-xcmsFileSource.R': No space left on device cp: error writing '/tmp/RtmpNUlbW5/Rbuild289ac96380a53e/xcms/R/methods-xcmsFragments.R': No space left on device cp: error writing '/tmp/RtmpNUlbW5/Rbuild289ac96380a53e/xcms/R/methods-xcmsPeaks.R': No space left on device cp: error writing '/tmp/RtmpNUlbW5/Rbuild289ac96380a53e/xcms/R/methods-xcmsRaw.R': No space left on device cp: error writing '/tmp/RtmpNUlbW5/Rbuild289ac96380a53e/xcms/R/methods-xcmsSet.R': No space left on device cp: error writing '/tmp/RtmpNUlbW5/Rbuild289ac96380a53e/xcms/R/models.R': No space left on device cp: error writing '/tmp/RtmpNUlbW5/Rbuild289ac96380a53e/xcms/R/mzClust.R': No space left on device cp: error writing '/tmp/RtmpNUlbW5/Rbuild289ac96380a53e/xcms/R/plotQC.R': No space left on device cp: error writing '/tmp/RtmpNUlbW5/Rbuild289ac96380a53e/xcms/R/ramp.R': No space left on device cp: error writing '/tmp/RtmpNUlbW5/Rbuild289ac96380a53e/xcms/R/specDist.R': No space left on device cp: error writing '/tmp/RtmpNUlbW5/Rbuild289ac96380a53e/xcms/R/write.mzquantML.R': No space left on device cp: error writing '/tmp/RtmpNUlbW5/Rbuild289ac96380a53e/xcms/R/writemzdata.R': No space left on device cp: error writing '/tmp/RtmpNUlbW5/Rbuild289ac96380a53e/xcms/R/writemztab.R': No space left on device cp: error writing '/tmp/RtmpNUlbW5/Rbuild289ac96380a53e/xcms/R/xcmsSource.R': No space left on device cp: error writing '/tmp/RtmpNUlbW5/Rbuild289ac96380a53e/xcms/R/zzz.R': No space left on device cp: cannot create directory '/tmp/RtmpNUlbW5/Rbuild289ac96380a53e/xcms/data': No space left on device cp: cannot create directory '/tmp/RtmpNUlbW5/Rbuild289ac96380a53e/xcms/inst': No space left on device cp: cannot create directory '/tmp/RtmpNUlbW5/Rbuild289ac96380a53e/xcms/longtests': No space left on device cp: cannot create directory '/tmp/RtmpNUlbW5/Rbuild289ac96380a53e/xcms/man': No space left on device cp: cannot create directory '/tmp/RtmpNUlbW5/Rbuild289ac96380a53e/xcms/src': No space left on device cp: cannot create directory '/tmp/RtmpNUlbW5/Rbuild289ac96380a53e/xcms/tests': No space left on device cp: cannot create directory '/tmp/RtmpNUlbW5/Rbuild289ac96380a53e/xcms/vignettes': No space left on device cp: error writing '/tmp/RtmpNUlbW5/Rbuild289ac96380a53e/xcms/.BBSoptions': No space left on device cp: error writing '/tmp/RtmpNUlbW5/Rbuild289ac96380a53e/xcms/.Rbuildignore': No space left on device cp: error writing '/tmp/RtmpNUlbW5/Rbuild289ac96380a53e/xcms/.gitignore': No space left on device cp: error writing '/tmp/RtmpNUlbW5/Rbuild289ac96380a53e/xcms/LICENSE': No space left on device cp: error writing '/tmp/RtmpNUlbW5/Rbuild289ac96380a53e/xcms/README.md': No space left on device cp: error writing '/tmp/RtmpNUlbW5/Rbuild289ac96380a53e/xcms/_pkgdown.yml': No space left on device cp: error writing '/tmp/RtmpNUlbW5/Rbuild289ac96380a53e/xcms/logo.png': No space left on device ERROR copying to build directory failed