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This page was generated on 2025-04-01 18:16 -0400 (Tue, 01 Apr 2025).

HostnameOSArch (*)R versionInstalled pkgs
teran2Linux (Ubuntu 24.04.1 LTS)x86_64R Under development (unstable) (2025-01-20 r87609) -- "Unsuffered Consequences" 871
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Package 171/217HostnameOS / ArchINSTALLBUILDCHECK
rhdf5 2.51.2  (landing page)
Mike Smith
Snapshot Date: 2025-04-01 18:00 -0400 (Tue, 01 Apr 2025)
git_url: https://git.bioconductor.org/packages/rhdf5
git_branch: devel
git_last_commit: 7d5023b
git_last_commit_date: 2025-03-24 17:43:52 -0400 (Mon, 24 Mar 2025)
teran2Linux (Ubuntu 24.04.1 LTS) / x86_64  ERROR    ERROR  skipped


BUILD results for rhdf5 on teran2

To the developers/maintainers of the rhdf5 package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: rhdf5
Version: 2.51.2
Command: /home/rapidbuild/bbs-3.21-bioc-rapid/R/bin/R CMD build --keep-empty-dirs --no-resave-data rhdf5
StartedAt: 2025-04-01 18:15:08 -0400 (Tue, 01 Apr 2025)
EndedAt: 2025-04-01 18:15:08 -0400 (Tue, 01 Apr 2025)
EllapsedTime: 0.3 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
###
###   /home/rapidbuild/bbs-3.21-bioc-rapid/R/bin/R CMD build --keep-empty-dirs --no-resave-data rhdf5
###
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##############################################################################


* checking for file ‘rhdf5/DESCRIPTION’ ... OK
cp: error writing '/tmp/RtmpumFO60/Rbuild2ccd8d59cc1535/rhdf5/configure': No space left on device
cp: error writing '/tmp/RtmpumFO60/Rbuild2ccd8d59cc1535/rhdf5/configure.ac': No space left on device
cp: error writing '/tmp/RtmpumFO60/Rbuild2ccd8d59cc1535/rhdf5/configure.win': No space left on device
cp: error writing '/tmp/RtmpumFO60/Rbuild2ccd8d59cc1535/rhdf5/config.log': No space left on device
cp: error writing '/tmp/RtmpumFO60/Rbuild2ccd8d59cc1535/rhdf5/config.status': No space left on device
cp: cannot create directory '/tmp/RtmpumFO60/Rbuild2ccd8d59cc1535/rhdf5/R': No space left on device
cp: cannot create directory '/tmp/RtmpumFO60/Rbuild2ccd8d59cc1535/rhdf5/inst': No space left on device
cp: cannot create directory '/tmp/RtmpumFO60/Rbuild2ccd8d59cc1535/rhdf5/longtests': No space left on device
cp: cannot create directory '/tmp/RtmpumFO60/Rbuild2ccd8d59cc1535/rhdf5/man': No space left on device
cp: cannot create directory '/tmp/RtmpumFO60/Rbuild2ccd8d59cc1535/rhdf5/src': No space left on device
cp: cannot create directory '/tmp/RtmpumFO60/Rbuild2ccd8d59cc1535/rhdf5/tests': No space left on device
cp: cannot create directory '/tmp/RtmpumFO60/Rbuild2ccd8d59cc1535/rhdf5/vignettes': No space left on device
 ERROR
copying to build directory failed