Rapid builds (Linux only) of a subset of BioC 3.21<BR>Report updated every 6 hours

Hostname	OS	Arch (*)	R version	Installed pkgs
teran2	Linux (Ubuntu 24.04.1 LTS)	x86_64	R Under development (unstable) (2025-01-20 r87609) -- "Unsuffered Consequences"	871
Click on any hostname to see more info about the system (e.g. compilers) () as reported by 'uname -p', except on Windows and Mac OS X*

BUILD results for gpls on teran2

To the developers/maintainers of the gpls package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Summary

Package: gpls

Version: 1.79.0

Command: /home/rapidbuild/bbs-3.21-bioc-rapid/R/bin/R CMD build --keep-empty-dirs --no-resave-data gpls

StartedAt: 2025-04-01 06:07:23 -0400 (Tue, 01 Apr 2025)

EndedAt: 2025-04-01 06:07:25 -0400 (Tue, 01 Apr 2025)

EllapsedTime: 1.8 seconds

RetCode: 1

Status: ERROR

PackageFile: None

PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/rapidbuild/bbs-3.21-bioc-rapid/R/bin/R CMD build --keep-empty-dirs --no-resave-data gpls
###
##############################################################################
##############################################################################


* checking for file ‘gpls/DESCRIPTION’ ... OK
* preparing ‘gpls’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
      -----------------------------------
* installing *source* package ‘gpls’ ...
** this is package ‘gpls’ version ‘1.79.0’
** using staged installation
** R
** byte-compile and prepare package for lazy loading
Note: break used in wrong context: no loop is visible 
Note: break used in wrong context: no loop is visible 
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
Error in base::serialize(base::as.list(base::getNamespace("gpls"), all.names = TRUE),  : 
  error writing to connection
Calls: <Anonymous> -> withCallingHandlers -> <Anonymous>
Execution halted
ERROR: loading failed
* removing ‘/tmp/Rtmp7WuNvz/Rinst288c4713895aa2/gpls’
      -----------------------------------
ERROR: package installation failed