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This page was generated on 2025-04-01 18:16 -0400 (Tue, 01 Apr 2025).

HostnameOSArch (*)R versionInstalled pkgs
teran2Linux (Ubuntu 24.04.1 LTS)x86_64R Under development (unstable) (2025-01-20 r87609) -- "Unsuffered Consequences" 871
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Package 88/217HostnameOS / ArchINSTALLBUILDCHECK
fmcsR 1.49.0  (landing page)
Thomas Girke
Snapshot Date: 2025-04-01 18:00 -0400 (Tue, 01 Apr 2025)
git_url: https://git.bioconductor.org/packages/fmcsR
git_branch: devel
git_last_commit: aacfd16
git_last_commit_date: 2024-10-29 09:42:23 -0400 (Tue, 29 Oct 2024)
teran2Linux (Ubuntu 24.04.1 LTS) / x86_64  ERROR    ERROR  skipped


BUILD results for fmcsR on teran2

To the developers/maintainers of the fmcsR package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: fmcsR
Version: 1.49.0
Command: /home/rapidbuild/bbs-3.21-bioc-rapid/R/bin/R CMD build --keep-empty-dirs --no-resave-data fmcsR
StartedAt: 2025-04-01 18:14:39 -0400 (Tue, 01 Apr 2025)
EndedAt: 2025-04-01 18:14:42 -0400 (Tue, 01 Apr 2025)
EllapsedTime: 3.0 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
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###
### Running command:
###
###   /home/rapidbuild/bbs-3.21-bioc-rapid/R/bin/R CMD build --keep-empty-dirs --no-resave-data fmcsR
###
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##############################################################################


* checking for file ‘fmcsR/DESCRIPTION’ ... OK
* preparing ‘fmcsR’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
      -----------------------------------
* installing *source* package ‘fmcsR’ ...
** this is package ‘fmcsR’ version ‘1.49.0’
** using staged installation
checking whether the C++ compiler works... yes
checking for C++ compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C++ compiler... yes
checking whether g++ -std=gnu++17 accepts -g... yes
checking for gcc... gcc
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... sed: couldn't flush stdout: No space left on device
unsupported
checking how to run the C preprocessor... ./configure: line 1509: printf: write error: No space left on device
./configure: line 1517: printf: write error: No space left on device
./configure: line 1524: printf: write error: No space left on device
sed: couldn't flush stdout: No space left on device
cat: confdefs.h: No space left on device
cat: write error: No space left on device
./configure: line 1509: printf: write error: No space left on device
gcc -E
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for ANSI C header files... yes
checking for sys/types.h... cat: confdefs.h: No space left on device
cat: write error: No space left on device
yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... sed: couldn't flush stdout: No space left on device
no
checking for stdint.h... yes
checking for unistd.h... yes
checking for stdbool.h that conforms to C99... yes
checking for _Bool... yes
checking for inline... inline
checking for size_t... yes
checking for alarm... yes
configure: creating ./config.status
config.status: creating src/Makevars
config.status: creating config.h
Warning in close.connection(file) :
  Problem closing connection:  No space left on device
Warning in dir.create(outMetaDir) :
  cannot create dir '/tmp/RtmpFHuPrC/Rinst2cbe2e21668832/00LOCK-fmcsR/00new/fmcsR/Meta', reason 'No space left on device'
Error in .install_package_description(".", instdir, built_stamp) : 
  cannot open directory '/tmp/RtmpFHuPrC/Rinst2cbe2e21668832/00LOCK-fmcsR/00new/fmcsR/Meta'
ERROR: installing package DESCRIPTION failed for package ‘fmcsR’
* removing ‘/tmp/RtmpFHuPrC/Rinst2cbe2e21668832/fmcsR’
      -----------------------------------
ERROR: package installation failed