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This page was generated on 2025-04-01 18:16 -0400 (Tue, 01 Apr 2025).

HostnameOSArch (*)R versionInstalled pkgs
teran2Linux (Ubuntu 24.04.1 LTS)x86_64R Under development (unstable) (2025-01-20 r87609) -- "Unsuffered Consequences" 871
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Package 73/217HostnameOS / ArchINSTALLBUILDCHECK
edgeR 4.5.10  (landing page)
Yunshun Chen , Gordon Smyth
Snapshot Date: 2025-04-01 18:00 -0400 (Tue, 01 Apr 2025)
git_url: https://git.bioconductor.org/packages/edgeR
git_branch: devel
git_last_commit: b0b5e2b
git_last_commit_date: 2025-03-29 04:50:21 -0400 (Sat, 29 Mar 2025)
teran2Linux (Ubuntu 24.04.1 LTS) / x86_64  ERROR    ERROR  skipped

BUILD results for edgeR on teran2

To the developers/maintainers of the edgeR package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: edgeR
Version: 4.5.10
Command: /home/rapidbuild/bbs-3.21-bioc-rapid/R/bin/R CMD build --keep-empty-dirs --no-resave-data edgeR
StartedAt: 2025-04-01 18:14:31 -0400 (Tue, 01 Apr 2025)
EndedAt: 2025-04-01 18:14:32 -0400 (Tue, 01 Apr 2025)
EllapsedTime: 0.6 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
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###   /home/rapidbuild/bbs-3.21-bioc-rapid/R/bin/R CMD build --keep-empty-dirs --no-resave-data edgeR
###
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* checking for file ‘edgeR/DESCRIPTION’ ... OK
cp: error writing '/tmp/Rtmp1w4l2c/Rbuild2cbc657071b005/edgeR/R/rowsum.R': No space left on device
cp: error writing '/tmp/Rtmp1w4l2c/Rbuild2cbc657071b005/edgeR/R/rpkm.R': No space left on device
cp: error writing '/tmp/Rtmp1w4l2c/Rbuild2cbc657071b005/edgeR/R/rpkmByGroup.R': No space left on device
cp: error writing '/tmp/Rtmp1w4l2c/Rbuild2cbc657071b005/edgeR/R/scaleOffset.R': No space left on device
cp: error writing '/tmp/Rtmp1w4l2c/Rbuild2cbc657071b005/edgeR/R/spliceVariants.R': No space left on device
cp: error writing '/tmp/Rtmp1w4l2c/Rbuild2cbc657071b005/edgeR/R/splitIntoGroups.R': No space left on device
cp: error writing '/tmp/Rtmp1w4l2c/Rbuild2cbc657071b005/edgeR/R/splitIntoGroupsPseudo.R': No space left on device
cp: error writing '/tmp/Rtmp1w4l2c/Rbuild2cbc657071b005/edgeR/R/subsetting.R': No space left on device
cp: error writing '/tmp/Rtmp1w4l2c/Rbuild2cbc657071b005/edgeR/R/sumTechReps.R': No space left on device
cp: error writing '/tmp/Rtmp1w4l2c/Rbuild2cbc657071b005/edgeR/R/systematicSubset.R': No space left on device
cp: error writing '/tmp/Rtmp1w4l2c/Rbuild2cbc657071b005/edgeR/R/thinCounts.R': No space left on device
cp: error writing '/tmp/Rtmp1w4l2c/Rbuild2cbc657071b005/edgeR/R/topTags.R': No space left on device
cp: error writing '/tmp/Rtmp1w4l2c/Rbuild2cbc657071b005/edgeR/R/validDGEList.R': No space left on device
cp: error writing '/tmp/Rtmp1w4l2c/Rbuild2cbc657071b005/edgeR/R/voomLmFit.R': No space left on device
cp: error writing '/tmp/Rtmp1w4l2c/Rbuild2cbc657071b005/edgeR/R/weightedCondLogLikDerDelta.R': No space left on device
cp: error writing '/tmp/Rtmp1w4l2c/Rbuild2cbc657071b005/edgeR/R/zscoreNBinom.R': No space left on device
cp: error writing '/tmp/Rtmp1w4l2c/Rbuild2cbc657071b005/edgeR/R/zscoreNBinomRand.R': No space left on device
cp: error writing '/tmp/Rtmp1w4l2c/Rbuild2cbc657071b005/edgeR/R/zzz.R': No space left on device
cp: cannot create directory '/tmp/Rtmp1w4l2c/Rbuild2cbc657071b005/edgeR/inst': No space left on device
cp: cannot create directory '/tmp/Rtmp1w4l2c/Rbuild2cbc657071b005/edgeR/man': No space left on device
cp: cannot create directory '/tmp/Rtmp1w4l2c/Rbuild2cbc657071b005/edgeR/src': No space left on device
cp: cannot create directory '/tmp/Rtmp1w4l2c/Rbuild2cbc657071b005/edgeR/tests': No space left on device
cp: cannot create directory '/tmp/Rtmp1w4l2c/Rbuild2cbc657071b005/edgeR/vignettes': No space left on device
 ERROR
copying to build directory failed