Back to Rapid builds (Linux only) of a subset of BioC 3.21 Report updated every 6 hours |
This page was generated on 2025-04-04 12:34 -0400 (Fri, 04 Apr 2025).
Hostname | OS | Arch (*) | R version | Installed pkgs |
---|---|---|---|---|
teran2 | Linux (Ubuntu 24.04.1 LTS) | x86_64 | R Under development (unstable) (2025-01-20 r87609) -- "Unsuffered Consequences" | 871 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
Package 130/217 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | |||||||
MassSpecWavelet 1.73.1 (landing page) Sergio Oller Moreno
| teran2 | Linux (Ubuntu 24.04.1 LTS) / x86_64 | OK | ERROR | skipped | |||||||
To the developers/maintainers of the MassSpecWavelet package: - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
Package: MassSpecWavelet |
Version: 1.73.1 |
Command: /home/rapidbuild/bbs-3.21-bioc-rapid/R/bin/R CMD build --keep-empty-dirs --no-resave-data MassSpecWavelet |
StartedAt: 2025-04-04 12:26:05 -0400 (Fri, 04 Apr 2025) |
EndedAt: 2025-04-04 12:26:11 -0400 (Fri, 04 Apr 2025) |
EllapsedTime: 6.2 seconds |
RetCode: 1 |
Status: ERROR |
PackageFile: None |
PackageFileSize: NA |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/rapidbuild/bbs-3.21-bioc-rapid/R/bin/R CMD build --keep-empty-dirs --no-resave-data MassSpecWavelet ### ############################################################################## ############################################################################## * checking for file ‘MassSpecWavelet/DESCRIPTION’ ... OK * preparing ‘MassSpecWavelet’: * checking DESCRIPTION meta-information ... OK * cleaning src * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘FindingLocalMaxima.Rmd’ using rmarkdown Write Error Write Error Write Error Error: processing vignette 'FindingLocalMaxima.Rmd' failed with diagnostics: Error writing to connection: No space left on device --- failed re-building ‘FindingLocalMaxima.Rmd’ --- re-building ‘MassSpecWavelet.Rmd’ using rmarkdown Warning in close.connection(con) : Problem closing connection: No space left on device Warning in close.connection(con) : Problem closing connection: No space left on device Write Error Write Error Quitting from MassSpecWavelet.Rmd:101-103 [unnamed-chunk-6] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ <error/rlang_error> Error: ! R: improper image header `/tmp/RtmpekzmKs/Rbuild2c71b05238525c/MassSpecWavelet/vignettes/MassSpecWavelet_files/figure-html/unnamed-chunk-6-1.png' @ error/png.c/ReadPNGImage/4195 --- Backtrace: ▆ 1. ├─tools::buildVignettes(dir = ".", tangle = TRUE) 2. │ ├─base::tryCatch(...) 3. │ │ └─base (local) tryCatchList(expr, classes, parentenv, handlers) 4. │ │ └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]]) 5. │ │ └─base (local) doTryCatch(return(expr), name, parentenv, handler) 6. │ └─engine$weave(file, quiet = quiet, encoding = enc) 7. │ └─knitr:::vweave_rmarkdown(...) 8. │ └─rmarkdown::render(...) 9. │ └─knitr::knit(knit_input, knit_output, envir = envir, quiet = quiet) 10. │ └─knitr:::process_file(text, output) 11. │ ├─xfun:::handle_error(...) 12. │ ├─base::withCallingHandlers(...) 13. │ └─knitr:::process_group(group) 14. │ └─knitr:::call_block(x) 15. │ └─knitr:::block_exec(params) 16. │ └─knitr:::eng_r(options) 17. │ └─knitr:::run_hooks(before = FALSE, options, env) 18. │ └─base::do.call(hook, args, envir = envir) 19. └─knitr (local) `<fn>`(...) 20. ├─knitr:::in_base_dir(for (f in get_plot_files()) plot_crop(f)) 21. │ └─knitr:::in_dir(d, expr) 22. └─knitr::plot_crop(f) 23. └─magick::image_read(x) 24. ├─base::withCallingHandlers(...) 25. └─magick:::magick_image_readpath(path, density, depth, strip, defines) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'MassSpecWavelet.Rmd' failed with diagnostics: R: improper image header `/tmp/RtmpekzmKs/Rbuild2c71b05238525c/MassSpecWavelet/vignettes/MassSpecWavelet_files/figure-html/unnamed-chunk-6-1.png' @ error/png.c/ReadPNGImage/4195 --- failed re-building ‘MassSpecWavelet.Rmd’ SUMMARY: processing the following files failed: ‘FindingLocalMaxima.Rmd’ ‘MassSpecWavelet.Rmd’ Error: Vignette re-building failed. Execution halted