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This page was generated on 2025-04-04 12:34 -0400 (Fri, 04 Apr 2025).

HostnameOSArch (*)R versionInstalled pkgs
teran2Linux (Ubuntu 24.04.1 LTS)x86_64R Under development (unstable) (2025-01-20 r87609) -- "Unsuffered Consequences" 871
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Package 130/217HostnameOS / ArchINSTALLBUILDCHECK
MassSpecWavelet 1.73.1  (landing page)
Sergio Oller Moreno
Snapshot Date: 2025-04-04 12:00 -0400 (Fri, 04 Apr 2025)
git_url: https://git.bioconductor.org/packages/MassSpecWavelet
git_branch: devel
git_last_commit: 5443820
git_last_commit_date: 2024-12-18 02:22:19 -0400 (Wed, 18 Dec 2024)
teran2Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    ERROR  skipped


BUILD results for MassSpecWavelet on teran2

To the developers/maintainers of the MassSpecWavelet package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: MassSpecWavelet
Version: 1.73.1
Command: /home/rapidbuild/bbs-3.21-bioc-rapid/R/bin/R CMD build --keep-empty-dirs --no-resave-data MassSpecWavelet
StartedAt: 2025-04-04 12:26:05 -0400 (Fri, 04 Apr 2025)
EndedAt: 2025-04-04 12:26:11 -0400 (Fri, 04 Apr 2025)
EllapsedTime: 6.2 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
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###
### Running command:
###
###   /home/rapidbuild/bbs-3.21-bioc-rapid/R/bin/R CMD build --keep-empty-dirs --no-resave-data MassSpecWavelet
###
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##############################################################################


* checking for file ‘MassSpecWavelet/DESCRIPTION’ ... OK
* preparing ‘MassSpecWavelet’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘FindingLocalMaxima.Rmd’ using rmarkdown
Write Error
Write Error
Write Error
Error: processing vignette 'FindingLocalMaxima.Rmd' failed with diagnostics:
Error writing to connection:  No space left on device
--- failed re-building ‘FindingLocalMaxima.Rmd’

--- re-building ‘MassSpecWavelet.Rmd’ using rmarkdown
Warning in close.connection(con) :
  Problem closing connection:  No space left on device
Warning in close.connection(con) :
  Problem closing connection:  No space left on device
Write Error
Write Error

Quitting from MassSpecWavelet.Rmd:101-103 [unnamed-chunk-6]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error:
! R: improper image header `/tmp/RtmpekzmKs/Rbuild2c71b05238525c/MassSpecWavelet/vignettes/MassSpecWavelet_files/figure-html/unnamed-chunk-6-1.png' @ error/png.c/ReadPNGImage/4195
---
Backtrace:
     ▆
  1. ├─tools::buildVignettes(dir = ".", tangle = TRUE)
  2. │ ├─base::tryCatch(...)
  3. │ │ └─base (local) tryCatchList(expr, classes, parentenv, handlers)
  4. │ │   └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]])
  5. │ │     └─base (local) doTryCatch(return(expr), name, parentenv, handler)
  6. │ └─engine$weave(file, quiet = quiet, encoding = enc)
  7. │   └─knitr:::vweave_rmarkdown(...)
  8. │     └─rmarkdown::render(...)
  9. │       └─knitr::knit(knit_input, knit_output, envir = envir, quiet = quiet)
 10. │         └─knitr:::process_file(text, output)
 11. │           ├─xfun:::handle_error(...)
 12. │           ├─base::withCallingHandlers(...)
 13. │           └─knitr:::process_group(group)
 14. │             └─knitr:::call_block(x)
 15. │               └─knitr:::block_exec(params)
 16. │                 └─knitr:::eng_r(options)
 17. │                   └─knitr:::run_hooks(before = FALSE, options, env)
 18. │                     └─base::do.call(hook, args, envir = envir)
 19. └─knitr (local) `<fn>`(...)
 20.   ├─knitr:::in_base_dir(for (f in get_plot_files()) plot_crop(f))
 21.   │ └─knitr:::in_dir(d, expr)
 22.   └─knitr::plot_crop(f)
 23.     └─magick::image_read(x)
 24.       ├─base::withCallingHandlers(...)
 25.       └─magick:::magick_image_readpath(path, density, depth, strip, defines)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Error: processing vignette 'MassSpecWavelet.Rmd' failed with diagnostics:
R: improper image header `/tmp/RtmpekzmKs/Rbuild2c71b05238525c/MassSpecWavelet/vignettes/MassSpecWavelet_files/figure-html/unnamed-chunk-6-1.png' @ error/png.c/ReadPNGImage/4195
--- failed re-building ‘MassSpecWavelet.Rmd’

SUMMARY: processing the following files failed:
  ‘FindingLocalMaxima.Rmd’ ‘MassSpecWavelet.Rmd’

Error: Vignette re-building failed.
Execution halted