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### Running command:
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###   /home/biocbuild/bbs-3.22-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data --md5 spatialFDA
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* checking for file ‘spatialFDA/DESCRIPTION’ ... OK
* preparing ‘spatialFDA’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘DiabetesIsletExample.Rmd’ using rmarkdown

Quitting from DiabetesIsletExample.Rmd:345-366 [funcGamG]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `fortify()`:
! `data` must be a <data.frame>, or an object coercible by `fortify()`,
  or a valid <data.frame>-like object coercible by `as.data.frame()`.
Caused by error in `check_data_frame_like()`:
! `dim(data)` must return an <integer> of length 2.
---
Backtrace:
     ▆
  1. ├─BiocGenerics::lapply(colnames(mm), plotMdl, mdl = mdl, shift = mdl$coefficients[["(Intercept)"]])
  2. └─base::lapply(colnames(mm), plotMdl, mdl = mdl, shift = mdl$coefficients[["(Intercept)"]])
  3.   └─spatialFDA (local) FUN(X[[i]], ...)
  4.     ├─ggplot2::ggplot(df, aes(.data$x.vec, .data$value))
  5.     └─ggplot2:::ggplot.default(df, aes(.data$x.vec, .data$value))
  6.       ├─ggplot2::fortify(data, ...)
  7.       └─ggplot2:::fortify.default(data, ...)
  8.         ├─rlang::try_fetch(...)
  9.         │ ├─base::tryCatch(...)
 10.         │ │ └─base (local) tryCatchList(expr, classes, parentenv, handlers)
 11.         │ │   └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]])
 12.         │ │     └─base (local) doTryCatch(return(expr), name, parentenv, handler)
 13.         │ └─base::withCallingHandlers(...)
 14.         └─ggplot2:::validate_as_data_frame(model)
 15.           └─ggplot2:::check_data_frame_like(data)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Error: processing vignette 'DiabetesIsletExample.Rmd' failed with diagnostics:
`data` must be a <data.frame>, or an object coercible by `fortify()`, or
a valid <data.frame>-like object coercible by `as.data.frame()`.
Caused by error in `check_data_frame_like()`:
! `dim(data)` must return an <integer> of length 2.
--- failed re-building ‘DiabetesIsletExample.Rmd’

--- re-building ‘DiabetesIsletExampleBrief.Rmd’ using rmarkdown

Quitting from DiabetesIsletExampleBrief.Rmd:169-175 [bubblePlot]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `combine_vars()`:
! Faceting variables must have at least one value.
---
Backtrace:
     ▆
  1. ├─base::withVisible(knit_print(x, ...))
  2. ├─knitr::knit_print(x, ...)
  3. └─knitr:::knit_print.default(x, ...)
  4.   └─knitr::normal_print(x)
  5.     ├─base::print(x)
  6.     └─ggplot2 (local) `print.ggplot2::ggplot`(x)
  7.       ├─ggplot2::ggplot_build(x)
  8.       └─ggplot2 (local) `ggplot_build.ggplot2::ggplot`(x)
  9.         └─layout$setup(data, plot@data, plot@plot_env)
 10.           └─ggplot2 (local) setup(..., self = self)
 11.             └─self$facet$compute_layout(data, self$facet_params)
 12.               └─ggplot2 (local) compute_layout(..., self = self)
 13.                 └─ggplot2::combine_vars(data, params$plot_env, vars, drop = params$drop)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Error: processing vignette 'DiabetesIsletExampleBrief.Rmd' failed with diagnostics:
Faceting variables must have at least one value.
--- failed re-building ‘DiabetesIsletExampleBrief.Rmd’

SUMMARY: processing the following files failed:
  ‘DiabetesIsletExample.Rmd’ ‘DiabetesIsletExampleBrief.Rmd’

Error: Vignette re-building failed.
Execution halted