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This page was generated on 2025-01-02 12:07 -0500 (Thu, 02 Jan 2025).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 24.04.1 LTS)x86_644.4.2 (2024-10-31) -- "Pile of Leaves" 4744
palomino8Windows Server 2022 Datacenterx644.4.2 (2024-10-31 ucrt) -- "Pile of Leaves" 4487
merida1macOS 12.7.5 Montereyx86_644.4.2 (2024-10-31) -- "Pile of Leaves" 4515
kjohnson1macOS 13.6.6 Venturaarm644.4.2 (2024-10-31) -- "Pile of Leaves" 4467
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 1693/2289HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
rDGIdb 1.32.0  (landing page)
Lars Bosshard
Snapshot Date: 2024-12-30 13:00 -0500 (Mon, 30 Dec 2024)
git_url: https://git.bioconductor.org/packages/rDGIdb
git_branch: RELEASE_3_20
git_last_commit: 402dc5c
git_last_commit_date: 2024-10-29 10:12:26 -0500 (Tue, 29 Oct 2024)
nebbiolo2Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    ERROR  skipped
palomino8Windows Server 2022 Datacenter / x64  OK    ERROR  skippedskipped
merida1macOS 12.7.5 Monterey / x86_64  OK    ERROR  skippedskipped
kjohnson1macOS 13.6.6 Ventura / arm64  OK    ERROR  skippedskipped

BUILD results for rDGIdb on kjohnson1

To the developers/maintainers of the rDGIdb package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/rDGIdb.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: rDGIdb
Version: 1.32.0
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data rDGIdb
StartedAt: 2024-12-31 06:04:08 -0500 (Tue, 31 Dec 2024)
EndedAt: 2024-12-31 06:04:34 -0500 (Tue, 31 Dec 2024)
EllapsedTime: 25.7 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data rDGIdb
###
##############################################################################
##############################################################################


* checking for file ‘rDGIdb/DESCRIPTION’ ... OK
* preparing ‘rDGIdb’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘vignette.Rnw’ using knitr

Quitting from lines 62-63 [query-dgidb-first] (vignette.Rnw)
Error: processing vignette 'vignette.Rnw' failed with diagnostics:
Timeout was reached [old.dgidb.org]: Failed to connect to old.dgidb.org port 443 after 10151 ms: Timeout was reached
--- failed re-building ‘vignette.Rnw’

SUMMARY: processing the following file failed:
  ‘vignette.Rnw’

Error: Vignette re-building failed.
Execution halted