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This page was generated on 2024-12-12 12:09 -0500 (Thu, 12 Dec 2024).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 24.04.1 LTS)x86_644.4.2 (2024-10-31) -- "Pile of Leaves" 4739
palomino8Windows Server 2022 Datacenterx644.4.2 (2024-10-31 ucrt) -- "Pile of Leaves" 4482
merida1macOS 12.7.5 Montereyx86_644.4.2 (2024-10-31) -- "Pile of Leaves" 4510
kjohnson1macOS 13.6.6 Venturaarm644.4.2 (2024-10-31) -- "Pile of Leaves" 4462
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 1590/2289HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
primirTSS 1.24.0  (landing page)
Pumin Li
Snapshot Date: 2024-12-09 13:00 -0500 (Mon, 09 Dec 2024)
git_url: https://git.bioconductor.org/packages/primirTSS
git_branch: RELEASE_3_20
git_last_commit: 4320ad5
git_last_commit_date: 2024-10-29 10:31:09 -0500 (Tue, 29 Oct 2024)
nebbiolo2Linux (Ubuntu 24.04.1 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
palomino8Windows Server 2022 Datacenter / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
merida1macOS 12.7.5 Monterey / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
kjohnson1macOS 13.6.6 Ventura / arm64  OK    OK    WARNINGS    OK  NO, package depends on 'TFBSTools' which is only available as a source package that needs compilation


BUILD BIN results for primirTSS on kjohnson1

To the developers/maintainers of the primirTSS package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/primirTSS.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: primirTSS
Version: 1.24.0
Command: rm -rf primirTSS.buildbin-libdir && mkdir primirTSS.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh primirTSS_1.24.0.tar.gz /Library/Frameworks/R.framework/Resources/bin/R primirTSS.buildbin-libdir
StartedAt: 2024-12-11 15:55:10 -0500 (Wed, 11 Dec 2024)
EndedAt: 2024-12-11 15:56:04 -0500 (Wed, 11 Dec 2024)
EllapsedTime: 53.6 seconds
RetCode: 0
Status:   OK  
PackageFile: primirTSS_1.24.0.tgz
PackageFileSize: 3.832 MiB

Command output

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###
### Running command:
###
###   rm -rf primirTSS.buildbin-libdir && mkdir primirTSS.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh primirTSS_1.24.0.tar.gz /Library/Frameworks/R.framework/Resources/bin/R primirTSS.buildbin-libdir
###
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>>>>>>> 
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=primirTSS.buildbin-libdir primirTSS_1.24.0.tar.gz'
>>>>>>> 

* installing *source* package ‘primirTSS’ ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
Warning: replacing previous import ‘utils::findMatches’ by ‘S4Vectors::findMatches’ when loading ‘phastCons100way.UCSC.hg38’
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: replacing previous import ‘utils::findMatches’ by ‘S4Vectors::findMatches’ when loading ‘phastCons100way.UCSC.hg38’
** testing if installed package can be loaded from final location
Warning: replacing previous import ‘utils::findMatches’ by ‘S4Vectors::findMatches’ when loading ‘phastCons100way.UCSC.hg38’
** testing if installed package keeps a record of temporary installation path
* DONE (primirTSS)